Array 1 72148-74995 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJUL01000005.1 Gallaecimonas pentaromativorans strain DSM 21945 Ga0244683_105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 72148 28 100.0 32 ............................ AGCAGTCAGGTTCTATACTGTGGGGTCAATGC 72208 28 100.0 32 ............................ AATAGAAGCCGGGCGCATCCCGTCACGGCCTT 72268 28 100.0 32 ............................ AAAACGGTTGGTGACTTCAACCATCTCCTTGG 72328 28 100.0 32 ............................ ATGCCCTTTAACGTTGATTCCACAGCGGGTTA 72388 28 100.0 32 ............................ ATGATGGTAATAGCTAGGGGAAAGTCATGAGC 72448 28 100.0 32 ............................ ATGGAGGATTGCAAATGAGCATGCTCCTAATG 72508 28 100.0 32 ............................ ATAAAAAGTAGATAGAAAAAAAGCAGTAAGGG 72568 28 100.0 32 ............................ GCTAAGCTGCATTGCTACCGCCTTGTCCTTGA 72628 28 100.0 32 ............................ AGAAATTTACGGTCCAAAATTTACGGCTTGAC 72688 28 100.0 32 ............................ GCCAAAGAGCAGCGGGCTTTGTTTGGTCAGTT 72748 28 100.0 32 ............................ TTGTCTTTGTAGACAAACGGGACTTCATTGAC 72808 28 100.0 32 ............................ TGCCAAAATACACCTGCGAAGAGCTGAGAGAC 72868 28 100.0 32 ............................ ACTCTGTCCACTGTTCATTTGCTGACTGTTCG 72928 28 100.0 32 ............................ TAAGCGGCGGGCGCAGACAAAGTTCCAGATGA 72988 28 100.0 32 ............................ GGCTTCGTCGCCAGCTTCTTGAATTTGATATT 73048 28 100.0 32 ............................ TAGAGCCGGGTGGATTCAATGGTGAAACCGGT 73108 28 100.0 32 ............................ TACCGATTGTGGGGGAGACAATGAGCGACAAC 73168 28 100.0 32 ............................ GGCAGCGACGTTGTTAATTGACGGCGCCTTAA 73228 28 100.0 32 ............................ CAGCACCGAGTAGTCAAAGCGATTGAGCGCCT 73288 28 100.0 32 ............................ ATGATGAATTCGGCGTCTTTGCCGTCTTCACC 73348 28 100.0 32 ............................ ATCAGGCGCAGGCGGGTAGCGCCGTTCTGGGG 73408 28 100.0 32 ............................ AGCAGCGCCGATGGCAACACGATGTGCGTCAA 73468 28 100.0 32 ............................ TTAATAAAGTAATAATCCTCCTCTACGTCACT 73528 28 100.0 32 ............................ TCCGATAAAAGCGGCGATGGCGCCAACAATGA 73588 28 100.0 32 ............................ TGTTAAGTCCAAAGAATCCCCCTCTGTTCTTT 73648 28 100.0 32 ............................ GACGCTGGGCCTTACCGTTTCTGACATGGCCA 73708 28 100.0 32 ............................ AATGGAGGCAGCTCATGGTCAACCGTCATGAC 73768 28 100.0 32 ............................ TCAAGGGGTTGGGTGATGGAGTTTGATGAAGC 73828 28 100.0 32 ............................ AATTCCAACTGCTCTTTGCGCGATAGCTGCGG 73888 28 100.0 32 ............................ ATGCTCGATAGTGGCTATAGTCAACAGCGCTT 73948 28 100.0 32 ............................ CGCAAAGCAACTAAAGCCCGCAAACAGCAGGT 74008 28 100.0 32 ............................ AGGGTCGGCACCGCGACACCGGCACAAATGCC 74068 28 100.0 32 ............................ ACAAAATAGACGTTTTCGTCTTCGCGACGCTC 74128 28 100.0 32 ............................ ATTGACGGCGACAACAACGGCGCTGTCATAGC 74188 28 100.0 32 ............................ AGGTTCTCGCCGAGGTCTAGTGAGCGCATAAC 74248 28 100.0 32 ............................ AGATCATCTTCTGTCAGTTCCATCACCGCGGC 74308 28 100.0 32 ............................ ATTGCCGCGCCGCCGGCGCCAAATGGCTGCGA 74368 28 100.0 32 ............................ TTAGAGCTTGGCGATGTCGAGTGAAAGCTGCT 74428 28 100.0 32 ............................ AATCGCAGACGACGGGCTTCTGCAAGCTGGTT 74488 28 100.0 32 ............................ AGAAGTCTGGGCATGAGAAGTTTGCTGGTCAC 74548 28 100.0 32 ............................ AAGAAGGAGTTCGGCTTCACTAGCAATAAGCT 74608 28 100.0 32 ............................ AACGGAAGTTGGCGTTAATCCGATCTATATCA 74668 28 100.0 32 ............................ ATATCAGCGACACCAACGCCGGCTTTGTGGGC 74728 28 100.0 32 ............................ TAGAGGCCACCAAGGCCATGAAGGAGCTAGAA 74788 28 100.0 32 ............................ AGTTCGTGACACTCTACCCGAGGTCACCGAAA 74848 28 100.0 32 ............................ TCAAATCTCAATGGGGGAAAAACCAGCCCTCA 74908 28 100.0 32 ............................ TTCTTGACCTCGGGCGGGGTGAACTCGTCAAT 74968 28 89.3 0 ....................T.C...G. | ========== ====== ====== ====== ============================ ================================ ================== 48 28 99.8 32 CTTCACTGCCGCCCAGGCAGCTAAGAAA # Left flank : AACTCTTGATGGGCTGATGGCCGAGCCATGGCTGTTGGGAATGCGCGACCATAGCGAGGTGGGTGCCATTGCGTTGGTACCTGACCATGCACGATACCGGCAGCTAAAACGGGTACAGGCCAAAAGCAGCCCAGAACGGCTTCGCCGCCGCAGCATCAAATGCCTGGGTATCAGCGAACAAGAAGCCAAAGCGCGGATCCCTGACAGCGCCGCTAAATGGCTTAACTTGCCGTACTTGCAGCTGCAAAGTGGCAGTACCGGCCAGCGGTTTCGCCTGTTTTTGGAATTGGGGCCATTGCAAGAGGCGCCGCAGCCCGGCCTGTTTAACCGCTACGGCTTAAGCCCATCAGCCACCATCCCATGGTTTTGACCCTTTTTTTAAAGGCTCTATAGGGGGCCTTTAAAAACAACACCTTACAGCGCAGCTCCACAAAAGGGTTGCGCTGTCTTTTTGCGCCATTGCTCTTTAACAATCAAAACGTTAGGTTGGATAGGCTCTA # Right flank : AGCGGCTCCAAATCTGACTTAATAGATTTAGTTTTTCTTTGGTGCCACATCAATTCGTTCAGCACTCTCTTCAATTCAGAGTGTTGGTTTCTATGGAGAAAAGATGTGCTTGTTGCTGACTCTTTTAAATAACTAAAAAATGGGTGGCACTATCGGAGATATTTGCCTTTGTCCAGCCGCTAAATTGACCAGGGTAAGAATTTAAAAGTTAAAAAAACTGCGATGTTAATTTAATGCTCGTTAGTCATTCTGGTTTTTTCACAACAACGAGCATGCTTAATATGAAAAAAACACTGTCATCCCTGTTATTGATCGCATCGGCGCTGTTTTCTGGCCCGTTGCTGGCGGCCAACTGCGTTTACGGTTGTCCTACCGGTAAATCGGGTCAGGTGATCGAGCGTTCCATCTATACCCTGCAAAATAACGCATCCACCAAGTTTGCCGATTGGGCGGCTTACCATGTCACCGCCAGCACCATTGACGGCCCAACCCGTACCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCCCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGCCCAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //