Array 1 1616742-1625424 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLN01000001.1 Haloterrigena saccharevitans strain AB14 Htg_sac_contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 1616742 30 100.0 35 .............................. ACGACCTCCGCGGAGTCGTGCCGATCGGCGACGCG 1616807 30 100.0 36 .............................. CCAACTCTCGAGCGTGGTCCAATCCCACCGGAGATA 1616873 30 100.0 35 .............................. ATGCAACCGGGTTCGGACGGGGTTATCAAAGGTAT 1616938 30 100.0 35 .............................. GCCGTTCGTCCTGATCCGGTGGTAGCGTCCGCCTC 1617003 30 100.0 35 .............................. GCGTCATTATCCTCATCAACGCGGTCCCACAGACA 1617068 30 100.0 34 .............................. GCGGCTCGAGAGTACGACCCGTCGGCTCACCCGG 1617132 30 100.0 39 .............................. TCGAGGCCCCTGCCGTCCTTCGTGAACGCGTCCGCACCG 1617201 30 100.0 37 .............................. CCCGTCGACGCATGCTCCGCGGCTCCGCAGTGGCCCT 1617268 30 100.0 37 .............................. CGCATCGGTCGAGACCGCGGCCTCGATCAGCGGCCCC 1617335 30 100.0 36 .............................. TAACTCTCTGTCGTGACCGATAAGTCCGAGTTGTTC 1617401 30 100.0 37 .............................. GGCCCGGTAGAGTCTCCCGAGGATGTTCCGGGCCTGT 1617468 30 100.0 37 .............................. TCCACAAAGCGCTCACGCGCCCTCTCACGCAGGACGG 1617535 30 100.0 38 .............................. TATCTCCGGAGTCGATGCAAGCGAGGTCTCCGCAGACG 1617603 30 100.0 35 .............................. GAATATGTCACCGTCTCGCCGTCGGGGCCGTCGAT 1617668 30 100.0 34 .............................. TCGAGAAGGATTTTATCCCCGTTCGATGCCTCGT 1617732 30 100.0 37 .............................. GAGCGCGAGCGCCTCGAGGGCTGGGAGCGCCAGATCA 1617799 30 100.0 34 .............................. AACTATACAGCAAGCAACGATACCTATGCAAGTG 1617863 30 100.0 37 .............................. TGCCGCGTCGGGCAGGTCTATCGATTTCCCTGCTGTG 1617930 30 100.0 35 .............................. GTGCCGTTTCCATGTGTCCCCTCGATGTGAACGTT 1617995 30 100.0 36 .............................. CTCCACCTTGAGGAAGGAGAGAACCCGTCAAACCTG 1618061 30 100.0 36 .............................. GACTGATCGAACGATCTCCACGAACGTTCACATCGA 1618127 30 100.0 37 .............................. GGGGAAGCACCAGCGAGATATCGAACTGCAAAGCCGT 1618194 30 100.0 34 .............................. TGTGGACAACTGATTATACACAGGTTCAGCGGGA 1618258 30 100.0 42 .............................. GTCGGTGAACGGGACGTCGCCGTAGACGCCGCTGCCCCAGGT 1618330 30 100.0 38 .............................. GAGCGCTGCGCGATCACGTCATCGCTCAGCGGATGCTC 1618398 30 100.0 37 .............................. CAGGAGTGCGTGTTCGGCTTGAGCTTCGCGAACTCGT 1618465 30 100.0 36 .............................. CGGTACTCGTGATCCGGGCAGGTGCACGTCTCGGCC 1618531 30 100.0 37 .............................. GCGAACTCGTACGTCGAGACGCTCGTCCCGTCGACGG 1618598 30 100.0 35 .............................. CTCGAAGGGCGGTTTGCCGTCCTCGGGTTGCGCGA 1618663 30 100.0 35 .............................. GACCGGCCGCTGCATGTTGGGGCCAGCGAGATCGA 1618728 30 100.0 34 .............................. TACGTGTCATACTCCGGGGAGCCAGAGTAAGACG 1618792 30 100.0 35 .............................. GATGGAGGTGGGGCCGGTGAGCCGTTCCGCACCAA 1618857 30 100.0 36 .............................. ATGAACGCCGACGACCGCGACCTCGAGGAGGCCAAG 1618923 30 100.0 35 .............................. GAGACCGTCGCGTCGAAACCGGTCACGATCGCTGA 1618988 30 100.0 36 .............................. CCAGCGTCGTTTCCGACTCCCCCGACAGACAGTCCG 1619054 30 100.0 37 .............................. CGATCGGGCGGCATGATGGTGGCGACGACGCCGACGA 1619121 30 100.0 35 .............................. GGGTCCCGTACCTCGATCTCGTCGATCTCGAGGGT 1619186 30 100.0 36 .............................. GTCGATAACGCTCTTACTCGGCGCGACGGCCAGCAA 1619252 30 100.0 37 .............................. CCGCCGTCGTCGTCGCCGGCGTCGCTCGACGAGTCGC 1619319 30 100.0 37 .............................. GCATACGCCATCGCCAGCGAGTAGCCCGTCGGATCGC 1619386 30 100.0 36 .............................. TACGGTATATAGAGGCTGTCTCTAAAAGTCGATAGC 1619452 30 100.0 37 .............................. AGGCATCGTCGCCACCTCGCTCGACAAGCAACAGCCC 1619519 30 100.0 35 .............................. CGGACGGCATCAAGGTCCTGTTTCGGGGTGACGCC 1619584 30 100.0 37 .............................. GTACTCGCGATCCGGGGCGACCGTGTCGTCCGTGAAT 1619651 30 100.0 35 .............................. TTTTATCAGAAAGGTGGGGGTTGGTCAGCGGCAGC 1619716 30 100.0 36 .............................. GATGGTCGCCGGGTAGTCCATGTCAGCGGTCAGCTC 1619782 30 100.0 36 .............................. GATGGTCGCCGGGTAGTCCATGTCAGCGGTCAGCTC 1619848 30 100.0 37 .............................. TATCGCTGTCCGTCGTACCCGTCGAAGCGGTCGACCA 1619915 30 100.0 37 .............................. CGTTTGAGGATCTACGCTGGGGTGGTTCGGAATGAGC 1619982 30 100.0 36 .............................. GGCCAGACGATGGTCATCGTCCTCGGTGCGCTCGGG 1620048 30 100.0 36 .............................. CTTGGTCAGACCACTCCACCGCTTTATCAGACCGGC 1620114 30 100.0 36 .............................. GGCGCGTCGGGCGTCATGTGGCTCCTGGCCACCGCG 1620180 30 100.0 36 .............................. GACGTTCTCCCCGTCTGTGCCGACTTCGTTAGCGAC 1620246 30 100.0 35 .............................. GTATACGCGCCACGCGGCTTAGCACCGTTGTACGT 1620311 30 100.0 37 .............................. ACGTTGAGGACCTGGCCGACGGCGAACAGCGCGCCGA 1620378 30 100.0 37 .............................. TTCTACAAATCGTTTAACTTGAGTCCACAGTGTGTTG 1620445 30 100.0 34 .............................. GATCTCGACATCCAAGGCCTCGAGGCGCACCAGC 1620509 30 100.0 34 .............................. GACGACGATAAGCGCGGCGATGGGACAGTGACAG 1620573 30 100.0 35 .............................. CTGTCTGGTTGTACCGGCTGGACTCTGACGACACC 1620638 30 100.0 36 .............................. GCGGTATGCTCGCGACGCCTACCCGAGGTCGCGGGT 1620704 30 100.0 35 .............................. TCGACTTAGTCGCGAAGCCTCTGAGAATATATCTT 1620769 30 100.0 34 .............................. AAGATCCCCGAGGACAAGGTCATCAACCTCTACA 1620833 30 100.0 36 .............................. CGAGCGTGCACGTCTCGGCCCTCCGAGTCGGTGATG 1620899 30 100.0 35 .............................. GAGGTGTGCGAAATGACAGCGCGTAACGGGTCCGA 1620964 30 100.0 35 .............................. GGCTCACGTCCTGGTGGTCCACGTCGAGGACACCG 1621029 30 100.0 35 .............................. GGCTCACGTCCTGGTGGTCCACGTCGAGGACACCG 1621094 30 100.0 37 .............................. TTCTCGCCGGTCTCCTCATCGACGTAGTTGTATGCGA 1621161 30 100.0 36 .............................. CCGATCACGTTCCACCAGCCACCGGGTGACCCATAC 1621227 30 100.0 39 .............................. GCTGGTCGTCCTCCGCGTCGGCCAGCGTCTCGAGGTCTC 1621296 30 100.0 35 .............................. TATCCCCCAGTGCAACCGCTGAAAGAGTGGGCCGA 1621361 30 100.0 33 .............................. TCCACCGAGACGGGTGTGACAACCCCTACGTGG 1621424 30 100.0 37 .............................. ACAATTGAGAACTCAACCGATAGTATCGAAGTCAATG 1621491 30 100.0 33 .............................. ACGAACTCGTCTCGACCATCGAGACAGAACTTG 1621554 30 100.0 35 .............................. TGTCCGGGGATGCAGATCGCGTCGTCGTCGCCGTC 1621619 30 100.0 37 .............................. CGGTGTCGGAGTCGATGACTGCGACCCGGTCAGAATC 1621686 30 100.0 36 .............................. CTCTTTATCCAAGCCGAGAGTACACTTACTTCCACA 1621752 30 100.0 36 .............................. GACCGTGTGACGCTCGGTTAGCGATCCACCTGAGCA 1621818 30 100.0 36 .............................. CCGACGCTCTCCGCCGTCAGTGGCGATCTCCGGACT 1621884 30 100.0 37 .............................. TGTACTGAAACCCGCCGGTCCTAAATCTACCAATCTC 1621951 30 100.0 36 .............................. TCGACGAACAGCGAGTGGTAGGCCACCGAGCCGATG 1622017 30 100.0 36 .............................. GACGACGATCGTTCCGTCGGTGACAGCGCCCGGGTG 1622083 30 100.0 37 .............................. CGGCTCTTTGAGCCGTTTTCCGAGTGACGGGTCGCGC 1622150 30 96.7 37 .............................A CCCGACGTATCGGATGGGGAACGGCCGTCTGAGTGTG 1622217 30 96.7 37 .............................A ATGTTTCAGCCGTGTCACATTGTGATATGGCTCTCCC 1622284 30 96.7 37 .............................A GTGGACGCCGTGTTTGACCATCCGCCGGTAGACAGCA 1622351 30 96.7 37 .............................A TCTGGGAAGTCCGCTCAGTAGACTCAGGGGCTGAACG 1622418 30 96.7 35 .............................A CCGCGCGGGCGCCTCGCGCTCGAGACTGCGGTTCA 1622483 30 96.7 38 .............................A GCTATCTTGGTCGGCACGATCCGAACCCAAATGGACCG 1622551 30 96.7 35 .............................A CCGTGAGAAAATCCACTGGTTAACGGGTGAGATTG 1622616 30 96.7 36 .............................A CGCAACTCGAGACCGGCGTGGTAGCACGTCGGCATC 1622682 30 96.7 35 .............................A TTGCCACGCCATTACGACGGTCGTTTCAATCCGTT 1622747 30 96.7 37 .............................A ACGGACTGGAAGGGGTTGGATGAACGGGCAAAGGAAA 1622814 30 96.7 37 .............................A AAGCAACTCAGTGCGCTCGAGGGCGCGTTTGGGATAG 1622881 30 96.7 37 .............................A AGCACCAATGCACGGCGTGCGGGAAGGAAATCAGCAA 1622948 30 96.7 37 .............................A TACACGGGCGTTGAATTGGTCTGTCGGAGTGGGTTGT 1623015 30 96.7 37 .............................A CGATCACCCGCAGGGATCCATCCTCGCTCAGGAGACC 1623082 30 96.7 36 .............................A ACGAAGGAACTCCAGGAGATGCTGTCTACGAAGGAA 1623148 30 96.7 35 .............................A GCGATCGCGACGAGGCTCGCGAGGTCGCGGGACAC 1623213 30 96.7 36 .............................A TGCGAGTGAGTGGCTCGTCGTCGAGGACCTGTCGGG 1623279 30 96.7 36 .............................A GATCGATCAGTATCGCCCGTCTCGGTATCGCTCATG 1623345 30 96.7 36 .............................A GAAGCGCCAAACGGCGGCGTCTGGAAAGCCCGCCGC 1623411 30 96.7 37 .............................A TACACGAGCGTTGGGCGCTACCAGAGCGTCGTCCTCC 1623478 30 96.7 34 .............................A GACTCGTCGATCGTCGTCACCGACTCCTGTGCGA 1623542 30 96.7 35 .............................A GTCCGAATCACTTTGGCACATCGTAGCGAAGACTG 1623607 30 96.7 37 .............................A TACTGCTCGCAGTAGCTGTGTTACTGTTCGCGTGGAT 1623674 30 96.7 36 .............................A CTCAAATTCCTCCGGGTCAACCCCACCGTTCAGAAG 1623740 30 96.7 38 .............................A CCGGTTCGACGGCGACGAGTACCCGGGGTTGAAGGAGA 1623808 30 96.7 35 .............................A GAAGCCGACGAGCCCCAGTCGCTGACCTACGACGT 1623873 30 96.7 35 .............................A CTCCCGTTGAGAGTACGGACGGCACGGACCCGGTG 1623938 30 96.7 37 .............................A GTCGAGCGGACCGGCGTTGACACGGACGGTTTCAACG 1624005 30 93.3 37 ...C.........................A CGCTATGTCCATCGTGTCATGGACAGGTCCATACGGG 1624072 30 96.7 37 .............................A CCCTCTCATCCAGCGGCGGATGGTATGACGATGAACC 1624139 30 96.7 37 .............................A CCCTCTCATCCAGCGGCGGATGGTATGACGATGAACC 1624206 30 96.7 35 .............................A GAGGTGTCTATCTAATTACCCGGCCACTTATATTC 1624271 30 96.7 35 .............................A ATGCAGCCGGACACGATCGCCGTCGTATTCCTCAG 1624336 30 96.7 36 .............................A GCTTCCCCGTGCGCGACGGGAAAGTACATCGTCGCT 1624402 30 96.7 36 .............................A ACGGTTTGCTGTGGTTGACCAGCATTCATATCCGTC 1624468 30 96.7 37 .............................A CAGACACCCCAGCCCGAACATCTGGTCCCGGACTCGA 1624535 30 96.7 36 .............................A GGGACTTGCTCGAGGATATTGACGCGACAAGTTCGA 1624601 30 96.7 35 .............................A CGAGATCAACCTCGAGGTTGGGCGGATCGGTGATT 1624666 30 93.3 37 ............................AA CCGACCGAGCCCGAGGTCAACGTCGCCGTCGATCTCG 1624733 30 96.7 34 .............................A GGGCCCTCGGTGTCGATCTCGATCTCGATGCCGC 1624797 30 96.7 35 .............................A GCTGTCAGCGATGATTTGCCGACGCCGCCCGCTTC 1624862 30 96.7 37 .............................A TGGTACTGCGTGTCGACCGTACTCTCGCCCTTGTCGA 1624929 30 96.7 37 .............................A CGTAACTGCCTCTTCAACGGTGAGTGGGTCGTCGTTC 1624996 30 96.7 39 .............................A TTCGAGACGGTGTAGTACCGTTCCTCCGTTTCGGTGAGT 1625065 30 96.7 37 .............................G CGTCGCGGGTCGGCTGATTCGTGGTGGCGCAGTTCAT 1625132 30 100.0 35 .............................. GGGCACTGAGCCCGATCAGGATCAGGAGGACGCCG 1625197 30 100.0 38 .............................. CTGCGTTTGGAGTGTTGCGACTAACTCCGGTTGCTTGT 1625265 30 100.0 35 .............................. CGCGATCACGTCGTGAAGTTGGCCCACCGGCATCC 1625330 29 80.0 37 ...AT...C...-...........T....T TTCCACTTGAACAGTTCGGAATTCGTCTCGGTAAACA 1625396 29 90.0 0 ...A....C..........-.......... | ========== ====== ====== ====== ============================== ========================================== ================== 132 30 98.6 36 GTTTCAGAAGGACCCTTGTGGGGTCGAAGC # Left flank : TCGACCACCCGGACTTGGGAAAGAAAGTGAGCTACCAGTATCTCCTCCGTGTCGAAGCGTACAAACTGAAAAAACATCTCCTGACCGGCGAGGAATACGTCCCGTTCCGACGGTGGTGGTGAGTGTGGTCTACATCGTCGTGGTCTACGACATGGAAGCCGACCGGACCCACAGGATGCTGAAGTTCCTTCGGAGATATCTCACACACGTCCAAAACTCCGTGCTCGAGGGGGACGTGACTGAGGGCGACCTCGAAAAGATCCGATCCGGCGTCGACGAAATGCTCAAACCCGGAGAATCGACGATCATCTACCGCGTTTCCTCTGAGAAGATGGTTGAGAGAACCGTCTTCGGTGACGATCCTGCCGCCGACGATCAGTTCCTCTAACCGTCCCCGGTTGTTCCATCGACCCCGGGGGGTTCAGAGGTTATCGAGGGTCGACGGAAACGATGAAGTGTGAACGGCCAATAGAGCTGTTTACGTGGTCTAACTGGCCATG # Right flank : CCTCTAAAGGAAGGAAAATAGGAACAGATTTCCGGTCAGTTCTACTCGTACCAGCCCCGCGACACCGTTATCCTGATAGTGCCGACCAATTGACGATCTCCACGGCATCCGACTAACCTGGCCGGCGAAAGACGTTGGAGTCTCTGATCTCTTCAGAACCAAATACGGGCATTTCAGTCGGTTGAAAAGGTTGTTTAGCCGTGAAGGGGGAACGATATACGATACCAAAATCCGGTTTCGACTAACGCTCTTGCGTAGCACATTGTTGATGGAGAGCCGTCTTGCGCTTCTGCGGGGAATTGAGCGAGGATAGTATCTGGTCGATAGGCGATCAAACGGCCGGTTTCTGTTCCAACCCTTCTTTGGAGAGTTGTATCAACAATCTCCGACGGAAGAGCGTACGAGGAAACTCCACATCATAGAGCCGTGACATCACACTACGGCCGTCATCGGTTTACGACCTACTGGCGTGTTGAGCAGGATCTCAACCGAGAGTTAAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGACCCTTGTGGGGTCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //