Array 1 73646-75016 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKUT010000005.1 Escherichia coli strain ZWEC162 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 73646 29 100.0 32 ............................. TATCAGGAGCGTGAATAGTTTTGTGTTTTTGT 73707 29 100.0 32 ............................. GCCGCTGTATCCGTAGTCCGGGTGATACGGTG 73768 29 100.0 32 ............................. GCTCACTACCGCCGAAATCGCGCAGGCACTCC 73829 29 100.0 32 ............................. AGATCACACTTACCCTGCAAAATCTTAATGGG 73890 29 100.0 32 ............................. ACAATCACATATACGACGCGAGACGGAGATCG 73951 29 100.0 32 ............................. CTACCGGGACCGTTGGTTTCCACCATGACCAG 74012 29 100.0 32 ............................. GCCAATGATCCCTACTCGTACCCCCAAACGGG 74073 29 100.0 32 ............................. CTGACGGAAAGCCAATTCAACGTAATCTCAGG 74134 29 100.0 32 ............................. AATGGCGTTTATTTCTCCCATGTAGTGAGCTG 74195 29 100.0 32 ............................. ATAACAACGACACTCCGGCATATATAAAGGCA 74256 29 100.0 32 ............................. GAGACGGAAATCGCGGTTGATAACGCTGATAT 74317 29 100.0 32 ............................. CCAAAATCCCCTAGGAATCCCAGCACGGTGCG 74378 29 96.6 32 ............................T GGATCTGTGGGATTATCAACGAGGTCAAATAA 74439 29 100.0 32 ............................. TCTTCAACGGTTTTGATTTCAAGTTTTTTGAG 74500 29 100.0 32 ............................. CGTGCCGCTCTTGAGATCGGCGGAAAGTTTAT 74561 29 100.0 32 ............................. CCAGTGGAGCCGCCGCGAATTTACACACGATT 74622 29 100.0 32 ............................. GCGAGGGGCAGCCGTTCGCGCTGCATGTTGAT 74683 29 96.6 32 ..A.......................... AAAAAACAGTGGTACTACCGCCCCGCCGAACA 74744 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 74805 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 74866 29 93.1 32 .A.C......................... GAGCCTGACGAGACTACTGAGGCCGTTCTGTC 74927 29 96.6 32 .A........................... GACGCCGCCGCTGCGAAGCCGTTTCCGATGTT 74988 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTATGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTTGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 100720-102517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKUT010000005.1 Escherichia coli strain ZWEC162 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100720 29 96.6 32 ............C................ CGGGTAAAGTCTCGGCTGAGCGCGTATTGATG 100781 29 96.6 32 ............C................ TGTTTCGGTTATCAGTAATCCGGTAAACGCCG 100842 29 93.1 32 ............C...............C ACAACATCAGGATTGCGATCCGTAGCGTTACC 100903 29 93.1 32 ............C...............T GTACCGTGGCAATAATTCTCTTGAGAGCATAA 100964 29 96.6 32 ............C................ GCGGACGGCAAAACAATCGGGAGTCTGGATAA 101025 29 96.6 32 ............C................ ATTTTTACTGAAATGACGGCTCGATTTACAGC 101086 29 96.6 32 ............C................ CAACGGAGGCCCAGGGCGTGCCGGTTTCGAAA 101147 29 96.6 32 ............C................ TGAACACACTTCCAAAATTCAACGGTGACGCC 101208 29 100.0 32 ............................. CCGCTTCCCCGCTGGCTGTGTCTCGTCTCGTT 101269 29 100.0 32 ............................. ATTGCATTAAAGAGATCATGCGCGCCCAAAAT 101330 29 100.0 32 ............................. TCAAAAGATGAAATTTTGCAAATCAGGGCAGC 101391 29 100.0 32 ............................. TATTCGGTCACTCCCACAAATTTCCCAGGCCA 101452 29 100.0 32 ............................. AGGGCTGGTGGATTCGGGTAACTGGTTTGCTG 101513 29 100.0 32 ............................. TTGCGGGCGAAAGTGTCGATTCTGACACGATA 101574 29 100.0 32 ............................. GATTTACAAGAGGAACGATCATGACGGGTTTA 101635 29 100.0 32 ............................. GAAAATGCTCTTTGAAAATGCAATGCCCCGCG 101696 29 100.0 32 ............................. CAGACCCAGCGTGCCGCCCAGCGCCCGCGAGC 101757 29 100.0 32 ............................. CAGATACCTTGTTTTGTAACTGCGTTAATGTC 101818 29 100.0 32 ............................. CCACCTTTAAGCGCCATACCATTTCACATATG 101879 29 96.6 32 ............................C TAATTTTATGACAAGCGGTGGTGATGCTGAAC 101940 29 100.0 32 ............................. TTGCTCATTGCGAATCCCTCATCTGGCCTTAT 102001 29 100.0 32 ............................. GACATCATTTTCACAGCGACGCAAACAGCCGT 102062 29 100.0 32 ............................. CCAGTGGATTGAGACCACATACCAAATCACCG 102123 29 100.0 32 ............................. GAAGATATTTCTGGCGTTGGCCTGCGCGTGAC 102184 29 100.0 32 ............................. GCGGATCAGATAGAAAAACTATTCCGACAGTT 102245 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 102306 29 100.0 32 ............................. ATCATCCTTGCTGCGACGGACTACAACCGCCG 102367 29 100.0 32 ............................. GTCCAACGACATGAGGCGGTGGAACGATACGT 102428 29 96.6 32 ............C................ TCAGCAACAATTATTTTCGTCGCATCGTCATA 102489 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 30 29 98.5 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTTTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACACCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //