Array 1 182329-179679 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJSY01000003.1 Klebsiella pneumoniae strain EuSCAPE_TR027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182328 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182267 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182206 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182145 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182083 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182022 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181961 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181900 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181839 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181778 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181717 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181656 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181595 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181534 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181473 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181412 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181351 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181290 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181229 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181168 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181107 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181046 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180985 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180924 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180863 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180802 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180741 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180680 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180619 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180558 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180497 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180436 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180375 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180314 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180253 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180192 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180131 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180070 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180009 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 179948 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179887 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179826 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179765 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179707 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //