Array 1 270673-272835 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOYO010000002.1 Klebsiella pneumoniae strain C08 contig00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 270673 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 270734 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 270795 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 270856 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 270917 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 270978 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 271039 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 271100 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 271161 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 271222 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 271283 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 271344 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 271405 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 271466 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 271527 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 271588 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 271649 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 271711 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 271772 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 271833 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 271894 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 271955 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 272017 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 272078 29 100.0 32 ............................. AGGGTTTCGATTTTATCGGGATAGAAATGAAT 272139 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 272200 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 272261 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 272322 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 272383 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 272444 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 272505 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 272566 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 272627 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 272688 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 272749 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 272807 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //