Array 1 643707-644038 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEKBY010000002.1 Faecalibacterium prausnitzii strain Fp1160 SD0354_46_b_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    643707	    29	  96.6	    32	.............G...............	ATCCACGAATACCACAGAATGATGGCAACGGC	
    643768	    29	 100.0	    32	.............................	GCCTACCACAAGGGCGGTCTGGATGCCGCGCA	
    643829	    29	  93.1	    32	.............A..............T	ATGCATATGGCTGACTGCAAGCGTCAGGTGGC	
    643890	    29	  93.1	    32	.C...........A...............	TACGTGGTGCTGTACCAGATGCTCTGCCTTAT	
    643951	    29	  89.7	    32	T.......T....A...............	GGCTTGCATCCGGTTGGCTACGGCGACAACCG	
    644012	    27	  89.7	     0	.....................C.--....	|                               	
==========	======	======	======	=============================	================================	==================
         6	    29	  93.7	    33	CTTTTCCCCGCATCCGCGGGGGTGATCCC	                                	       

# Left flank :   AAGACCCCCAAAACCCCGCAGCGCGGGGAACCGTGGCCGCACATTGCACGACACAGTACCAGAAGCAGTGGCTGTTGGAGCGCGCTGCAAAGCACGGCTTTGCCCTGCGGGAGGAGGGATTTACCGTGACCCGGGTGCAGTGGCTGCATTTTGCCAAGCACGGCACCCGGCCGGTGACCCTGCTGGCAGTGACCTACGAGGGAGTTTTGCAGGTGACTGACCCAGAGCAGTTCCGGGCGCTGCTGTGTCAGGGCATGGGGCGCGGCAAGGCCTACGGCCTTGGGCTGGTGACCGTTATGCGCGGAGGAAACTGAGAGGAACGAGATGCCGGGCATGATCCGGCCGGACCTGCAGGCGCTGCCGCAGTATTTTCAGCTGGCAGAAAAAGTGGAGCATCGCGCCCTGCCGGATTGCCGTCTGATACAACAGGTTTATTGCAAACTGAAGGAAACAGCGGTACAATAGCAACGGGAGACACGGTGCTACGGGATCTCTTTAGT
# Right flank :  CAAAAGACCCCTCGCAAGGTTTTGCGTGAGCGCCTGAAAAAGCGTCCCTAAAGCAAACGAACCGCCCCGGTTTCCATAGCAGGAAGCCGGGGCGGTTTTGTATGCAGGAGGCGGGGGCAAGGGCAGTTCCTCTGACCTTGCGCTTTCTGGCATTTCACGGAAAAATGCGCAAACAAAAAGCAGACAGTGTCGTGGAAAGGAGGAGGAAAGCGACACTGCCTGCTGTATAGGAACCCCTGAACATTGCGGCTTGATCAGGAGGGATTTGGTAGTCTGTCCGCCGTTCTGGCTATTGCCTCGCATAGAAACGGGAGACAGTTTTTTATGGGCCTGCTGTGCGCCGCTGCTGCGGCCGCACCCGCAGGGAAATGTGCCTGCATGGGCTTTTGCGGGGAGAACCTTTCGGAGGTTATGGGGGATGTCCGTTCCGTTCTCCCTGAATGCACCCTTATTATGCCAGACAATCGTGGCAATTCTTTGTGGTAAATTTGAACAGTTTG

# Questionable array : NO	 Score: 3.86
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCATCCGCGGGGGTGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.40,-5.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [2-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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