Array 1 149699-149151 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820630.1 Porphyromonas sp. HMSC077F02 Scaffold195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 149698 37 100.0 35 ..................................... TCTTGAACCCTACGCTGTAGGGTTACCTTCTCTAG 149626 37 100.0 37 ..................................... GGCTCGGCCTTATTCAGGCTGCAAGTCTAGTAATAGT 149552 37 100.0 37 ..................................... TGCAACAAACGCGTTATCCATGTCAAGATCGACTGTA 149478 37 100.0 37 ..................................... TCATCTTTTGAAACTCCTCCCACTGCTCATCTACATA 149404 37 100.0 35 ..................................... TCTTGAACCCTACGCTGTAGGGTTACCTTCTCTAG 149332 37 100.0 35 ..................................... ATTGTCATCAAGATACAATCGAAGTTTGAAATTAT 149260 37 94.6 36 ......................T..G........... TTTTCACATTGATGTAGAGCATTGCTCCCTGTGCTA 149187 37 89.2 0 ...TT..G.............G............... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 98.0 36 GTCGCAGACCATATTCCATTAAAACAAGGATTAAGAC # Left flank : CGTGTGATAGTCTCTATTACACGAAATCTACTGCCCCTTAAAAGCCTTTTCTGGCTAATTTATAACTTGCTGATTTACAGTATCCTATAAAGCCAAAAAATGAGATGCAACTAAGCAATCGGTTAGTTGCAACAAAGCAAATGCTTAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTTGCAACTCGTCATTTGCTTAGTTGCATCTCAACTTTTTCTCTACTCTACCAACAATTGAAATGGGGTATAATTCTACTTTTATAGACCGTTAAAAAATGATGAAAGACAATTCAAAATTAGCCTATTGCATCATTCAAAAATAGTTGGTAACTTTGCACATCAATTTGAGAGACCCCTTTTTACCCACTTTTTAGGGGGTTCAAAAAGATAAGTCACTCAAATAGATAGAGTTAAGAGAGGTGCT # Right flank : GCTGATCCTGCTGGATTTTTCTTGAGATTTCCTTGCAGAGTATATATCCCAGTAGAGTAAGGATCGTGTGATTCCTTCGGGGTAGTTTGATTATGGTGTCCTTGCTATCCAAGCTTCTCCTATAGGCTAACTTACACTTGCCTATAGGAGAAGTTTGTATTAATTGACCTTGGTCCAGAGATTTCAGTATTTCGGTGGGTCGTCCGATTTGTCTGACCTGTCCGACTCGTCCGACAAGAGACCCCATCGTTATCTGCTTGTGGCACACGTGTGAATAGGGCTTCTTAGATTTTTTGTACCTTTGTGATTGTAGGTAATACAATTTTTGATGATGTGATGTAAGCTATGAGACTTCCCGACCCTTTTTTACCGATTGTAGATGTTCCTAAGGCGTATGCTAAGAAGTATGCCAAGGAGACTTGTCTCTTGACTCGTAACCCCCTCTCTGGGAGTTGGGACGAGATGACGTGGGCTCAGTTTGGGAGCATTGTGCAGAGGAT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGACCATATTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 183916-184082 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820630.1 Porphyromonas sp. HMSC077F02 Scaffold195, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 183916 36 100.0 29 .................................... TATATGCTCTTGTATCATTTTCGATCTCA 183981 36 100.0 30 .................................... CTTAACTTTATGAGTACACGTCCAGCCATC 184047 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Left flank : GGAAGAGGCGGATATTAAGGTGATTACCATTACCGACAAACAGTATGCTGAGATCATACACCTCTCGGGAACGAAGCAAAAGGAACCGAAGATACCGAAAATACGACAGCTATCACTCTTTGAGGAATTTTAGGTAGCTTTGAACTGAAAAAATAGACCCCTATTGGCTCTTTTCATCAAACATCGGCATTTTATCAGACGTCCTATGACCTCTAACCTATTGATATTTACAACTATATATCGCCGGCGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTTCACGTAGTCTAGCCATTTGATTAATTGGTTGTGGATTGATTACTTTAGGGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGATTACTTTAGGGAATGAGATACAACCGGTTAATGATGCTCAAATAGAAAAGATT # Right flank : CTTTAACTTTATGAGTACTCGCCCAGCTATCGTTGTGGATTGATTACTTTAGGGAATGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGATTACTTTAGGGAATGAGATACAACTGAACATACCATACAGCTAACACTTGACGGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTGTTTTTCAATGGCAATTATATCGGGTTTGTTGTGGATTGATTACTTTAGGGAATGAGATACAACCAAGGTGAATGCAGGGGTGGACATCTGTAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTACCTGCGGTGCAGACATTTCAAGAATTAGTTGTGGATTGATTACTTTAGGGAATGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 185079-185310 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820630.1 Porphyromonas sp. HMSC077F02 Scaffold195, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 185079 36 100.0 29 .................................... CTTCCTGCTCTTTACGTTTCACGAAGTTA 185144 36 100.0 29 .................................... ACCCAATGTTTGGTGTTAAACAGTCGCCT 185209 36 100.0 30 .................................... TCTCATTGTAACCGAAGGTGTCTTTACGCT 185275 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATTACTTTAGGGAATGAGATACAACTTCACTGCGTCGCATAGATTGACATTCATAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACATCTTGGCACTTTGGAATTGACCTACGAGAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACATTTCAACTGCAAAAGGTTGATTATCAGTGGTTGTGGATTGATTACTTTAGGGAATGAGATACAACGCTACGATTTCATCAAAGTACTGCTGCTTGTTGTGGATTGATTACTTTAGGGAATGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGATTACTTTAGGGAATGAGATACAACACGACCGATTTAATGAAACTCTAGAAAAGG # Right flank : CACTTGTTAAAGAACTCAATTAACCTATCGGTTGTGGATTGATTACTTTAGGGAATGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTGATTACTTTAGGGAATGAGATACAACCTTGAGAGGATACTCAAAAAAGCCAAAGAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTCCTTCACAGGCTTCTCTGCCTGCTTCACAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTACTTTCTCATCTTGTTTAATACCTAGCTGTTGTGGATTGATTACTTTAGGGAATGAGATACAACATTTGGCTATAACTTCAAGTATCGGTGTGAGTTGTGGATTGATTACTTTAGGGAATGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 4 185532-185698 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820630.1 Porphyromonas sp. HMSC077F02 Scaffold195, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 185532 36 100.0 30 .................................... TCCTTCACAGGCTTCTCTGCCTGCTTCACA 185598 36 100.0 29 .................................... TACTTTCTCATCTTGTTTAATACCTAGCT 185663 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Left flank : AGGGAATGAGATACAACACGACCGATTTAATGAAACTCTAGAAAAGGGTTGTGGATTGATTACTTTAGGGAATGAGATACAACCTTCCTGCTCTTTACGTTTCACGAAGTTAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACACCCAATGTTTGGTGTTAAACAGTCGCCTGTTGTGGATTGATTACTTTAGGGAATGAGATACAACTCTCATTGTAACCGAAGGTGTCTTTACGCTGTTGTGGATTGATTACTTTAGGGAATGAGATACAACACTTGTTAAAGAACTCAATTAACCTATCGGTTGTGGATTGATTACTTTAGGGAATGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTGATTACTTTAGGGAATGAGATACAACCTTGAGAGGATACTCAAAAAAGCCAAAGA # Right flank : CATTTGGCTATAACTTCAAGTATCGGTGTGAGTTGTGGATTGATTACTTTAGGGAATGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGATTACTTTAGGGAATGAGATACAACGGTGGTGGGTGACTTCTATATGCAAAGAGGTTGTGGATTGATTACTTTAGGGAATGAGATACAACCTACTAGGTCGGTGAAGTTGTCACCGAGCAGTTGTGGATTGATTACTTTAGGGAATGAGATACAACGAAGAACTCAAGGCACAAAAGGCAGAGCAGTTGTGGATTGATTACTTTAGGGAATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGATTACTTTA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGATTGATTACTTTAGGGAATGAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //