Array 1 601771-607585 **** Predicted by CRISPRDetect 2.4 *** >NC_007759.1 Syntrophus aciditrophicus SB, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 601771 35 100.0 40 ................................... AAAGCATAGCGTCTGCTCCTTAATACGTTTACATTATAAC 601846 35 100.0 37 ................................... GCCGCTGCCATTCCTGCAAACATCAAAACCATTGCCA 601918 35 100.0 41 ................................... TTGAACATTAATCCCGCTCCATCTGAATTGTTTTCAAAACA 601994 35 100.0 39 ................................... TGATACACACCTCTGCAATTATCACACGTGAAATAATTG 602068 35 100.0 36 ................................... CTGAGCAAAGCCTTACATTCTGTCCGGGTAATACGG 602139 35 100.0 40 ................................... ACAGTTACGATCAACGGTATTCCAACAGCAATCAAAACAG 602214 35 100.0 40 ................................... CGTAAATCCTGATTCCCGCTATCTCCCTCACACCCATCTT 602289 35 100.0 39 ................................... ATACCGCTACAATGGTCGCATGTAAAGTAACCGTTATCG 602363 35 100.0 39 ................................... GGTAAATCTCCACTCATAAAATTGGAGGAACTTCTATTG 602437 35 100.0 39 ................................... CTTAATACATCCATTTTAACCTCCTAATCGCTGTTATTT 602511 35 100.0 38 ................................... GCCTTTATGGTTTGTTATTTGGTTGCCTTGGTTGCCTT 602584 35 100.0 38 ................................... TTTGCATTGCATCCACCATACGCCCCATTGCTTGCAAC 602657 35 100.0 39 ................................... TGTGAACTGTGCCAGACTGAAACAAAATTCGATACTTGC 602731 35 100.0 39 ................................... TGCCTTTGCAGGCGCTACATCTACAGGGTTAACCATTGC 602805 35 100.0 41 ................................... CAGCAAATTGGCGTTGTGATATTGAATTTTCATGTAACCAT 602881 35 100.0 40 ................................... TCCTCTGCCGTGTTGACAATATAAATCCGGTCATCAAAAT 602956 35 100.0 41 ................................... TATGGCTTGTAATTTTGGAAATGGTCGTTGATGAGTTGGAA 603032 35 100.0 40 ................................... GACCAATCGACAATAGGCTTTTCGATCCAGGGAGCGATGA 603107 35 100.0 39 ................................... ATCATACACGTCCTCACAATATGTGTATATCCTCTCTTT 603181 35 100.0 38 ................................... AAGACTCAAGATCAAAAATATATCCTCTGCTCCTTGGT 603254 35 100.0 38 ................................... CATATTTCCTCCTATCGATACCGATCCGTTACATCCTC 603327 35 100.0 40 ................................... TTTTCTTGTATCCATTTATTCGGCCCATCTTCTTTATCTT 603402 35 100.0 41 ................................... TCCACATTCCAGTTCAAAAATCACTTCCCCATCCCATCGAC 603478 35 100.0 37 ................................... GAATCGGTATAGTCTCATGTGCCATAGCTCTATACCT 603550 35 100.0 38 ................................... CGCGAGATAGGATATTCAGGAACTCGGAATGATTGCCC 603623 35 100.0 38 ................................... CGCGAGATAGGATATTCAGGAACTCGGAATGATTGCCC 603696 35 100.0 39 ................................... TCAGGGATAACCCTTAGAATCCTCCTTTCTTTAGTGAAA 603770 35 100.0 40 ................................... GAACGCATACGAAACACGAACTGGCTGGCAGGCTGATCAA 603845 35 100.0 41 ................................... CTCAATACCGAGTTCGTTCAATACCCGCACGGAGTTCATCA 603921 35 100.0 38 ................................... TATCTATCTGCTTTTCAAATATTCTTTCCCAATTCGTT 603994 35 100.0 40 ................................... CCTGCATTGACTCGTTTCAATAGGCCGAGGCTCTTGTCCT 604069 35 100.0 39 ................................... CTTTTCTCCTTTTCTTCTTTTTCTTTTTCGTCTATTTCC 604143 35 100.0 39 ................................... ATGATAACCGTGAATAGCATTATCATTATCGTCATTATC 604217 35 100.0 39 ................................... ATGATAACCGTGAATAGCATTATCATTATCGTCATTATC 604291 35 100.0 38 ................................... TAAAGATGAAATCATGGAATACATCGGCGGAGTTTCGG 604364 35 100.0 38 ................................... CATCAGCCATAAGGTTGATATCATCCTGAGTACACTCC 604437 35 100.0 37 ................................... CAATTTTGATAAATCCATTCTATTAAATTCTTTTCGT 604509 35 100.0 37 ................................... GGAGGGGCGACCGGCGAATTGTACCGGGAAGACAGCA 604581 35 100.0 38 ................................... TACATTTTAGCACGTTAAAAATGTCGTGGTAAAAAAAA 604654 35 100.0 40 ................................... CTAACACCCCGGCCTCAATATGTTTTGTAAATGTGCTTTT 604729 35 100.0 41 ................................... TCCCCGAAGCCGGAAATTAATTTCATTTTCTTTACAACATT 604805 35 100.0 35 ................................... TCGTAATGCCTATTCCCAACGGCCTCCAAAGGTGC 604875 35 100.0 37 ................................... TAAAACTTCCCGACTTCAATGTTCATCATTCCCCCTC 604947 35 100.0 36 ................................... GTGCTGTCCGACGCGCAGATCGTAGTCATATACCCA 605018 35 100.0 41 ................................... AGCATTAAAGTTTTCCCCGAACCAGTGGCAGAAACCGCCAC 605094 35 100.0 39 ................................... GGTAATTCCCGGCAATAATATTCATTGCCCTGAGCGCAT 605168 35 100.0 36 ................................... TTTGCGGCTCTTTCGTTCTCCTGTTTCTTTTCACCT 605239 35 100.0 39 ................................... AATACCTGGGTATCGCCTTTATCGAAACGCTTCAGTATT 605313 35 100.0 40 ................................... ATGCGCTCCTGATTGCGTTCAATTTGTTCAAGGCGTTCGT 605388 35 100.0 37 ................................... AGGGGCAATTCTGGGGATGCACTTTCGAGGTTGCCCA 605460 35 100.0 40 ................................... TTAATGTCTGCGCATTCAACATGCAAGTTTGGGAACCATC 605535 35 100.0 40 ................................... CTGGTTTGCAAGGGCTTTGTAGTTTTTCATGATCGCCTCC 605610 35 100.0 39 ................................... CAAAAACAGCAACCGTGCTTTTCCTTTTGCTTCTCATAG 605684 35 100.0 38 ................................... CCACAAAATCGTGTTCATCAACATGATCCTTGTGATTT 605757 35 100.0 39 ................................... GCCGCATCGCTCACAGCGATATCCGGCTTCTTTCAATGC 605831 35 100.0 41 ................................... TCATAGGTTGTACTGATAGGTTTGTTCAGTGCTTGCATTGC 605907 35 100.0 40 ................................... GATTGATCCCATTTGACCGTTTTCGGTATTGTGATAACCA 605982 35 100.0 39 ................................... TTTCTTCCCTCCCCCTGCTTTTGCGGGTGACTGCGTTTT 606056 35 100.0 41 ................................... ATGCCAGTGTATCAGCATCCAAAGTATCCCTCACCCTGACC 606132 35 100.0 39 ................................... CCACGCCCATGATTTTTATCATGTTTTTTGCGTCTCTGA 606206 35 100.0 40 ................................... TCTTAAGGATCGTGTTATAGTAATCAGCCGGGTTGTCGTG 606281 35 100.0 37 ................................... AATGGATTCCCAGAGAAAAAGCGAAATCTTTCCTCGG 606353 35 100.0 39 ................................... GTCTCAACATGGCGTTAAACTCTGACGTTAGCATGGTTA 606427 35 100.0 40 ................................... CGCAGTCATTCTCTAATCTATCGTTTTCTTCCCTTAATCG 606502 35 100.0 40 ................................... CGCAGTCATTCTCTAATCTATCGTTTTCTTCCCTTAATCG 606577 35 100.0 40 ................................... CGCAGTCATTCTCTAATCTATCGTTTTCTTCCCTTAATCG 606652 35 100.0 41 ................................... CAGCTTGTTCGGCTGCTTGTTCGGACAAGTATTTCTTTTTC 606728 35 100.0 39 ................................... GCTCTTTCCCGTGCGTATTGGTTGTGTCTGCGTCCTTTG 606802 35 100.0 40 ................................... GCGTGATCGTGACTTCTCCTTTGGATAGCTTGGTAAGCAA 606877 35 100.0 42 ................................... AACTCAGAGATAACTTCATTGATTGCTTCATTATTCGTAATC 606954 35 100.0 41 ................................... ACGCGGCATGTGAACATTAAGGGGCAGTTCCAGGGTCATCT 607030 35 100.0 40 ................................... GAACCCATTAATAAGTTTAAAAAGCTGCCTTGCCCTCTCT 607105 35 100.0 39 ................................... CGCAGAGAGGCTGTTAATTTAAAAAGGCTGTTGATAATT 607179 35 100.0 40 ................................... TCAGTAATCCGGGGCTGGGGAATGTGACTTGCCTCCGCCC 607254 35 100.0 42 ................................... GGTTTCATCCTGTCCTCCGTTATCGGTATTGATCGGTTACGT 607331 35 100.0 39 ................................... ACTAAATTCCGTCCACGTGTAAGCAGATTTTTAGGAATA 607405 35 100.0 38 ................................... CAACGTATCCGCTGTGCTCATTCATCCAGGCGATGACT 607478 35 100.0 38 ................................... CAACGTATCCGCTGTGCTCATTCATCCAGGCGATGACT 607551 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================== ================== 79 35 100.0 39 GACAGAATTGACCTGATTTACGAAGGGATTGCGAC # Left flank : AAACTCCCTCTGCAAGCAACCTTTGAATTTCTCCATACAGCGGATATTGATGTAGGACATCGTTTTTTCCAAATAATCGATGAGATCAAAAAAATTCAAAGCAACCGTAATGAATCCATCCTTGCCCATGGAATAAAACCGGTTACAGAAAATGCTGTTGAAACAATTTTTCAGACGGTGTCCAATTTCACGGAATTCAAAAACGCCTATAATTTTCCCAAATTGCCACAATCGTGACAAAAAAGAAACGGGATTGCCCATTTTCCGCGAACCCCGATTATCAAACAGAGGGAACATACAATCATTTGATATTCTTAGTATTATATAAATACTTATTCTTTAGGTTTGCAGGTTTGGAAATTATTCAATGAAATCGGATAAATCGATTTAAGAAATGGAGTCTGCAGTATGGAGAAATCGATGTTTTTTGGGTTTGTGGATACAGGTTCGCGATTATGGTACCTGGAATCCTTGTATTTTCTCCAAAATCGAAGGCCGCG # Right flank : CTATATAGAGCTCACCATCGAGCTCGATATCTCGTAGGCCCGACGGAATTGGCCTGATTTACAAAATTAACGTGGAATTCCGGCGGCAACGTTGCCGATTTTGTTTCCCTCGGATTGCCATGGGATAATGCCTTTAAATTCGAAAATGGAGGCGACTTCCCATGGTGGTTTACGTCCGGACCCAGGGCGCGAGAATTATCAAGGAGGGACGGCATCTGCTCGTCAGGAAAGGCGATGCCGTTTACCATACCCTCTTCACCTACAAGCTCGATCAGCTCGTTATTTTCGGTAATGTGGAGATCACGCACCAGGCATTGGCTCAGCTGATGCGCTATGGCATTGACGTCGTTTTTCTGAGTTTCAGAGGCCGATACCTGGGGCGAATATCGCCGCCGGAATCGAAGAATGTCTTTCTTCATAAACGGCAATACAGTCTTCTGGGCAACGAAACCTTCACCCTTCGACAGGTTCGGGCCATCGTCGCCGGAAAGCTCGCCAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACAGAATTGACCTGATTTACGAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 2752984-2747386 **** Predicted by CRISPRDetect 2.4 *** >NC_007759.1 Syntrophus aciditrophicus SB, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2752983 32 100.0 35 ................................ TTTCGGTGGTGCCGGGACTCGGTGTGGCGGGAGTG 2752916 32 100.0 38 ................................ TACAAGCACGCCCACGGCTGGAGCAATCGGCTGGTAGC 2752846 32 100.0 35 ................................ GAGGAAAAACCGATTGGGGAAGGTACCGGTTACAC 2752779 32 100.0 35 ................................ GACCTTTAATGCCAGCAGCAACATCGAAGCTTACC 2752712 32 100.0 35 ................................ GTCATGGCCGTAGACATCGCCCAGGTTGCGGACGC 2752645 32 100.0 34 ................................ TGTCTTTGCCGCCCAGGTCAGACATCCGGAAAGA 2752579 32 100.0 33 ................................ ATCTTTATTCGCCGCCCAGGACGACTCGATATG 2752514 32 100.0 34 ................................ GGTCGCGTCGGATATCTCCACGATTGAGTGGGAC 2752448 32 100.0 34 ................................ CCCGCCCGTGGGAATAGAAGTCGATGGTGTATCG 2752382 32 100.0 32 ................................ TAAAATGTAGTCAACGGTAGTCAACAGGCAAG 2752318 32 100.0 35 ................................ AGCCCACCCTGACCCTGGATTGGGAGCGGGTCCGT 2752251 32 100.0 34 ................................ CCTTAAGGGCTCTGTAAAATAAATTGAATCCATC 2752185 32 100.0 34 ................................ GGGAAATTTGATAGGAAACGACTTACCCACAAAT 2752119 32 100.0 35 ................................ GGATTGGTGAATTAATACACATAATTCTTGACAAT 2752052 32 100.0 36 ................................ GGCGAGATCGAGATCGGCAAGGGCAAAACGGCCAGA 2751984 32 100.0 34 ................................ CTTCAGGAGCTTATATGTCCTGGCCTTCCCAAAG 2751918 32 100.0 33 ................................ CTCCTGTTTGCTTTCGATGACTATCTTATAAAC 2751853 32 100.0 34 ................................ CCGCATATGTCCGGACGCTGGCAGAGGTTGTTAA 2751787 32 100.0 34 ................................ TTTTTTTGGGTTAGTGAAATAGGGCTTGATGAAA 2751721 32 100.0 34 ................................ ATCTAAACCCTCTTTGATACGGCCCTAACGCCAG 2751655 32 100.0 35 ................................ GAGCAAAGCCCGAACCGGCAAGCGTTTCCGAAGAA 2751588 32 100.0 33 ................................ TATGATGAAGCCAGCCGAAACCGAGGGACTTAT 2751523 32 100.0 33 ................................ AGGCATAACCCCTGCCAACATAGGCGGCTTGCT 2751458 32 100.0 34 ................................ CTAAGGAATACTGGAACCTGAAAAATGAAGGCAA 2751392 32 100.0 34 ................................ GCATTGTTCAGGGTATGAAAATGCGTATTCCTGT 2751326 32 100.0 36 ................................ GCAACACCCCCTAAAGACCGTGGCCACCGGGCTGCC 2751258 32 100.0 34 ................................ TAGCAAATCAAACCAGTGATGTCCTGATGCGCTA 2751192 32 100.0 34 ................................ GGGCAATGAGGGCAAAGGTCGCTGATAGCTTTGA 2751126 32 100.0 33 ................................ TATGATGAAGCCAGCCGAAACCGAGGGACTTAT 2751061 32 100.0 34 ................................ CAGATAACGAGCCTGCGCCTGCGGATCGGGGAAT 2750995 32 100.0 36 ................................ TGGCTACCGGCGACTTGTGGCTCTTTTTTGATTACG 2750927 32 100.0 36 ................................ TGGCTACCGGCGACTTGTGGCTCTTTTTTGATTACG 2750859 32 100.0 35 ................................ AATCTGCCGCCCTTTGGCAAGGTAAGATCGAAAAA 2750792 32 100.0 34 ................................ ATCCCGATAGGACTGTGAAAGCAGTCCGAGCCTC 2750726 32 100.0 34 ................................ AAGGCAAATGTCACGATTGCGGCAAAGACCTGGA 2750660 32 100.0 34 ................................ GACTCCCTGCCCGTCCACCAATAGAAAGGAACGC 2750594 32 100.0 34 ................................ AGGGGGAGAAAACAACAGCGGACGGGAGAGACAT 2750528 32 100.0 34 ................................ CGCCCAGATCAGACCGATGTAACTGTCCGCCATT 2750462 32 100.0 34 ................................ GCAATGATGAAGCTGTCCAATACCAAATCTCGGT 2750396 32 100.0 35 ................................ ATATCGGATGTTGACGAAGGGCGCAAACGTGAAGG 2750329 32 100.0 33 ................................ GGATCGGTCTCGGCCACATCCGCAGACACCATC 2750264 32 100.0 34 ................................ TGAAAATTCAGCCTGGAGGAACGCCGCTCAACAT 2750198 32 100.0 34 ................................ TGGATGCAAACCTGCTAAACAAAAAAGCAATGTG 2750132 32 100.0 33 ................................ CTCAGGGCGGCAATGCCGCAATGATTGTGAATT 2750067 32 100.0 35 ................................ CGAAACCGACGCCCAACTCGCCCAAGCTGACAGCT 2750000 32 100.0 35 ................................ GTTGCGCTGCGGCTAAAACAGGCGATGGACGCCAA 2749933 32 100.0 33 ................................ CGTCAACGCTCATCTTGCCGGTGTCCCGATAGA 2749868 32 100.0 33 ................................ TCCAGACAGTAGGTTGCTGTATCCCAGATATTC 2749803 32 100.0 34 ................................ AGCTTAAAACGGAAGGATCGGAACGGATCGCCAT 2749737 32 100.0 36 ................................ TATCCCCTTCAGACCGGGCCAAAGGAGGCACAGGAC 2749669 32 100.0 35 ................................ CCTTCTGCTTCCCCTGACCGACCGGGAACAGGGGC 2749602 32 100.0 35 ................................ TACAATGCCACCTGGCGCACGATAGCCGCCCTCTC 2749535 32 100.0 34 ................................ AATGGGCAATATAACTCAGTAACCCTTAACCCAT 2749469 32 100.0 37 ................................ CCCTGCCTACCTCAGGAGACGATGAGAGGAATCAATA 2749400 32 100.0 33 ................................ TGAATCATGTCATCAACCCTGCGGTTACGAATA 2749335 32 100.0 34 ................................ CAGAACGCAACGGCGCGGGAATAACGACGATAAA 2749269 32 100.0 33 ................................ TTTGCTCCCCGTCTGGTTGCAAGCCGGTTCAAT 2749204 32 100.0 35 ................................ TTCGATGCAGTCCGCGCACATGCCCTGATATTCGC 2749137 32 100.0 33 ................................ TAATACGGTTGCGATTTCTTCCGCGCTGTCATC 2749072 32 100.0 34 ................................ TGGACAACAATGCGGAAAAATGATTCCCTGGCCA 2749006 32 100.0 34 ................................ CGGAAATGATAACCGTTCAGGATATAGGGATAGG 2748940 32 100.0 35 ................................ CGAATTGCATAGGCTCACCTCAATGTGTCATCCGG 2748873 32 100.0 36 ................................ TCCCTGCAATACGGAACCGAGGACAAGCTGGAGCAT 2748805 32 100.0 33 ................................ CGAGAATCAATTCCCGAAGGAACTGACGTTAAT 2748740 32 100.0 34 ................................ CTTGAGGGTCAATGTCTCCCCTCTGCAATCTAAT 2748674 32 100.0 33 ................................ CCCAAAACGGGCATAGAAATCAGCCGTAGCGGA 2748609 32 100.0 34 ................................ CTTATGGGGGTGGGAAGCGCCCAGGGGAGACAAT 2748543 32 100.0 36 ................................ CGGGCTTCCATGCCATTTGTTGGCCCCTCTATGCAT 2748475 32 100.0 34 ................................ TACCATATTAATATGACATTGCTTATTAGTCAAG 2748409 32 100.0 34 ................................ GTCAGTCAAATAAGCCCCGTCCTCAGTTATGAGA 2748343 32 100.0 34 ................................ CTGTCGATCTGCCGCAGGGTGCGGATTGCAAACC 2748277 32 100.0 34 ................................ CCGCATATCGGGCAAATCCTTGGCTCTTTGCATC 2748211 32 100.0 33 ................................ GCTTATCAGGAGTCTGGCAACCGAACCTCTATC 2748146 32 100.0 35 ................................ GTCCGCGTTACTCGGTCGATGTGCCGTTGCGCCGT 2748079 32 100.0 35 ................................ CGCTGTGACCCCACGGATTCAGCCGATGCAGGCGT 2748012 32 100.0 33 ................................ CCTTGATTTACATGCCCTACAAACTCGAGGCAC 2747947 32 100.0 34 ................................ GTTGTCTAAAATCCAAATCGTAGAGGTGAATTAT 2747881 32 100.0 34 ................................ GTTGTCTAAAATCCAAATCGTAGAGGTGAATTAT 2747815 32 100.0 34 ................................ GTTGTCTAAAATCCAAATCGTAGAGGTGAATTAT 2747749 32 100.0 36 ................................ CGTCGTATTGGGATTTCCTTCCCGGAGGGGTTCCGG 2747681 32 100.0 35 ................................ ATAACTGGAAACAACACAACATGGGAGGTAAATAA 2747614 32 100.0 34 ................................ AAAGCACGCCGCTCCGGATGCATACAAGCACTAT 2747548 32 100.0 34 ................................ GCATTGATAAAACATGAATTAACCAAGAGGGGAT 2747482 32 100.0 33 ................................ AGAAATCACAAGAAAGGGAGAATCATCATGGGT 2747417 32 90.6 0 .............................TGT | ========== ====== ====== ====== ================================ ====================================== ================== 85 32 99.9 34 GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Left flank : ACATTACTTAACAAACAGGTAACGAAAAATGATGGTTGTTGTCAGTTATGATGTGGCTAAGTTGGATACTGGTGGAGCCAGGCGATTGCGCCGTATAGCAAAGACCTGCCAGAATTATGGCCAAAGAGTTCAATATTCTGTTTTTGAGTGCATTGTTGATCCCGCACAATGGACACTATTTCGGAAGAGTTTGATTGATGAAATAAATCCCGAGGAAGACAGTTTGAGATTTTATTTTTTGGGATCGAATTGGCGACGGCGTGTTGAACATGTTGGCGCGAAGAAAACCATTGATCAGGAAGGTCCCCTTGTTATTTAAGCCGGCGCGAACATCAAGCTGTCATAATCTTGCATGGGAGTTCGCGGATGAAATAAGTAATTGATATTACGGATATTAAAAAGGATCATTAATCTTATTGTACACTAAATAAGTCTATCCTCTTACCATTCGCGGAAAGTCCTTGAAAAGCATCCTTAAAATCTCAATTTAAATGTAAACA # Right flank : TTCTGCCCAAGGGACGGTTAAGATCAGCCCGGTCCACATCAGCCAGCCTCCAGAAAAACAAAGGGGGTTGATTCCCGAAAGAACCAACCCCCTTTTTCATGAAGGAAAGCGAATGCTCAAATTATGGTGCCGAAGGCCGGACTTGAACCGGCACGGTCATGAACCACTACCCCCTCAAGATAGCGTGTCTACCAGATTCCACCACTTCGGCATGTTACTGGAATTCCAGACGTTTCCTGAAAAGTCCTGCGTACTTCCGGAATCCTGTTTTATGGAGCAACCTGCAATCGGAGCGTAGGCTAACTTAACTCCGATGATTTTGTCAATACGAAAAGATGGTTTTGGGTGCTTTTTCTCAAAGCGTCTTTCCTCATTTCGCCGGTTGAGTCGTTGTCGGCGAAGCCGGAGCGCTGCTGGAAGCCGGAGCGCTGCTGGAAGCCGGAGCAGTTGCAGCCGGAGCTGACGGTAATGGCGCAGGCGCGGACACCGGTTTTTCGGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //