Array 1 1452419-1451724 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036523.1 [Clostridium] hiranonis strain DSM 13275 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1452418 30 100.0 36 .............................. ATGATGGAATAGAAAAGGATGCAATGAGATTGATGC 1452352 30 100.0 36 .............................. ATTATATTATTTTTAAGAGTTACAGTTTCTGGTTTA 1452286 30 100.0 38 .............................. GCATCTGTTGTTCTGCAGCTTTTTGTTCTTCTTCTGTC 1452218 30 100.0 36 .............................. AAGTAATTGAAAAACTCAAAGAAGTGTTTAACGTTG 1452152 30 100.0 36 .............................. TTAAAACAGTAAAGCCACGCATTATTTCGGGTCCCA 1452086 30 100.0 37 .............................. TTTGATAATCGTCGAACTTATCATCAGCATAGGTTGA 1452019 30 100.0 36 .............................. ATAGATATTAGCAAAATTAAAAATAAAGATGATATG 1451953 30 100.0 38 .............................. TAGAGATTATATCGAGCAAGATAGACAAAGATATGAGG 1451885 30 100.0 36 .............................. CATCTTGTATTCGATACAAATAGAAGAATGGATATC 1451819 30 100.0 36 .............................. GTTATAGAAAACTGTAATAAAGTTATAATGAAAGTC 1451753 30 96.7 0 .................C............ | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.7 37 ATTTGATTAGAACCATATTGGAATGTAAAT # Left flank : ACATCTCAAAAATGTAGTAAGTGTGGGTATATAGATAAAGAAAATAGACCTACTCAGGAAAAATTTAAATGTATTAAATGTGGTTTTGAGCTTAATGCGGATCATAATGCAGCTATCAATATTTCAAGATTGGAAGAATAATATTTATATAATTTTTAAATAATAATGGTTCTATAGGCGATTTAGCGTCTAAAGGTTGAGGGATAAGACAAAATGGTTAAGGTTTCGACCAACTAACTACTTATCCACTCGATAAACGGTAAAAACTCATACTAATATTCTTTATAGATAACGTGGTATGACATTCCAAGAATTATATAAATTGTCGACCTTAGATAATGTAAAATACCTAGGAGATAGACAAAATGAGATATTGCAATAGTTGGATCTGTTTTTTATCAAGAAGGACTATTTTTTACTTTAGAAAATATATGTTTATTTGTAGGTAGACAAATAGTATATCTGTATATGTTGCAATTGCTAGGTTTAATATATAACGT # Right flank : TATGTATTGCATATTGTTGACCAAGGTCCTATTGAATCTGACTAGAACTATTTTATGACAATTATGCAAATTAATATTTTTTAGCCAAGAAAACCAACATACGAAAGTTTTCTTGGCTATTATTTTAAATACTATTCCCTAGACTGCATTTGTTCTATTAATGACTGTTGTCTATATTTTCTAATTGACCAAGTTGCCAAAACAAACTCTAAGATAAATAGAACTAATACGAATAATCCCATATCAAATATAGGGAACTGATAAGGAAGTACTCTACCTGCAAAAGCTGCAGTACTTACTTTTCTACATGCGACTATAGAAATAGGAGTACCGACAATCACCGTAACAATTGTTGCAGCAAACAAGTAACATAGACCTTCAGTTACATACATTTTGTAAAGTTGTTTTTCAGTTAAACCTATAGAACGTAAAATACTATTTTCTACCTTCCTAGATATTTGATTAGATAAAGTTGTATTAATTAGATTAATAACACCAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGATTAGAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 2497785-2495708 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036523.1 [Clostridium] hiranonis strain DSM 13275 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2497784 30 100.0 36 .............................. TTGGTAATTTAGATTCCGTTAATGCCGAGTTAGATG 2497718 30 100.0 35 .............................. GGTGGAGCAGCTGCAGACGTCGATAAACAAAGCAG 2497653 30 100.0 36 .............................. GATATAAATTAACTATTGAAGATTGGGCATCTTATA 2497587 30 100.0 37 .............................. TTAAGTAAATTTATGAATATAACAGATGTTAAAGAGG 2497520 30 100.0 36 .............................. TAGAATTCTTTTACTTCTGGCATCATCTCTGAACGC 2497454 30 100.0 36 .............................. AATAAATGTTATGAAGTCACAAAAATGGGCTGCGAA 2497388 30 100.0 36 .............................. TAAGAATCACCGAAAATATACTTAGCCTGTTCTGGA 2497322 30 100.0 36 .............................. ATAGATGTTGGGATAAATCTGTATAGAATATCACAG 2497256 30 100.0 36 .............................. GTTCTACCATTCGCCATTCATTCCACCTCCAATCTT 2497190 30 100.0 37 .............................. TGGATCTTATCGTGATATGAACGCTTTTGATTTCTAT 2497123 30 100.0 36 .............................. TCTACTGCGGTATTGCTATTTCCAAAGATTACAACT 2497057 30 100.0 35 .............................. CTTAAGAACACTGATGCTAGGGAGTTTAGAGCTAT 2496992 30 100.0 37 .............................. TCGCTTTTGGCTTCATTTCTGCATTTTCTATTTCTAA 2496925 30 100.0 36 .............................. AAGCTTTAGTAGTGGTTATTTGACTAAAACTGCACA 2496859 30 100.0 35 .............................. CACACACCTTCTAACCGAAAAGCTGGAATAGAAGG 2496794 30 100.0 37 .............................. TCTCCATCAGGATATAGTTATAAACATAAACATATAG 2496727 30 100.0 35 .............................. AAATGAAATTAGTAGAAATATTATAATAACTATAC 2496662 30 100.0 36 .............................. GCAATAGTACTAGGTATAAGAAAGTGGACTAGAGAA 2496596 30 100.0 36 .............................. CGTGTGGAGGACATCCTAACTCTAGCAAAGGTCCAT 2496530 30 100.0 35 .............................. GCTTTATACAGATCATGAAAGAATGATTTATAAAT 2496465 30 100.0 35 .............................. GAAAATAAATCAAGAAATAGAAGCATTAAAAGCTC 2496400 30 100.0 37 .............................. AAAAATTTTCCAGATGATGATATTGCTAGAAGAAGTA 2496333 30 100.0 36 .............................. TAGAAAAAGGAGTTACAGTGCTAAAAGTTAGCTTTG 2496267 30 100.0 36 .............................. TTTAAAGAATTTATTTCAATATTATAATCATTCAAT 2496201 30 100.0 36 .............................. TTCAGACTTAATCCTGCTTCTACTAATTTGTCCTGT 2496135 30 100.0 36 .............................. TTATGTTGCTATAAAGAAAACATTCAAAATGAACGA 2496069 30 100.0 37 .............................. TCAGTCCATACAGGTGCATCACTTAATCCAGAAACAT 2496002 30 100.0 36 .............................. GTAAATACTCCAACCACTGCCATTATTATAGTTACT 2495936 30 100.0 36 .............................. GATACAGATAGGAAGCTTTCCCTTCTAGCTATACCT 2495870 30 100.0 37 .............................. AATTCAGGTTTTGCATAAATTGATACATTAACTTTGT 2495803 30 93.3 36 ..G.........T................. ATAACTGCCTGCTTGTTATGTGAATTAGCTAAAAGA 2495737 30 90.0 0 ..G.........................TG | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.5 36 GCTTATTAATAACATTTGATGTATTTAAAT # Left flank : ATTGGATTGTTACAAATTAATAAAATACATTCTTGAAGATAAGGAATTTGTTCCTTTTTCAGCTAAAGAAGGTGTTTAGTAATGAAGAATAAAAACTATAATTATGCATTCTTATTTTATGATGTAGGTGAGAAAAGAGTTCGGAAGGTATTTAAGATTTGTAAAAAGTATCTAGTACATTATCAGAATTCCGTATTTAGAGGGGATATAACACCTTCAAAGATTATTAGTTTAAAATCTGAATTAAAAAAAGTTGTAAATGAAGATGATTTTATATGTATTATAAAAATGATGAATGATTCTTGTTTTGAAGAGGATGTTATAGGCGAAAAAAGATATAAGGATGATGAGTTGATTCTATAAATATCCCAGCGATCTTTAGGAATTGTGTATATTTCAGTCTTTGAATAATTTTTAAATCGTTGGGAAATAAGATAGGAAATGGGAAAATTCAATAGTTTTATGATATAATAATTTTTAAGAGTATTAATTTTACTATG # Right flank : ATAATTAGATAAATATAAAGTAAACCATATTGACAAAAATAAAAACTCCTTCTAACATAAAAATAAACAAACGAAAAACAAGGAGTTGAAATAATGGGCTTTCAGACCATAACAGAAGTAATAGAACAAAACATCCAAAACGGAATCAAAAAAACAAACCTAACAACAAAAAAACTAATCCTACTTGGAATAGCAGCGGGATTTTTCATAGGAATCGGTGCAGAAGCAAGTAGCCTTGCAATGCATGGAATATCAAACGTGGGACTAGCAAGAACAGTAGCTGGAGCAGTATTCCCAATAGGTCTAATGCTAATCGTACTACTAGGTGGAGAACTATTCACAGGAAACTGCCTAATATCAATGGCAGTATACGACAAAAAAGCAAAACTAAAAGGAATGATCAGAAACCTGACAATAGTCTACATAAGTAACTTCATTGGAGCAGCACTAATGGCATGGATGATAAATAACTGTGGTCAGCTAAACTTTAGCGATGGTGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTATTAATAACATTTGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //