Array 1 22511-24780 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJIN01000040.1 Prevotella sp. oral taxon 306 str. F0472 ctg120004305429, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 22511 47 100.0 29 ............................................... ATCGTGAACACGTGAAAACTTTTCTTAAT 22587 47 100.0 30 ............................................... CTCCGGTCACAATTTTGCTACTGGCAACAA 22664 47 100.0 30 ............................................... ACACCGACTACGAGCGAGACCGCAAGGAAA 22741 47 100.0 29 ............................................... ATAAGTGTACCAGCAGTTTGCAAGCGAAG 22817 47 100.0 30 ............................................... TCAAGCTGGTGACGCATGGCGTTACATCAA 22894 47 100.0 29 ............................................... CAATTCTGATTTTTATGAGCAGCCTGAAG 22970 47 100.0 29 ............................................... TCCTTGCGCGTGCGCGTATCCTATTAATT 23046 47 100.0 30 ............................................... ATCGTTTATTTTCTTGTATTAATAGATTGA 23123 47 100.0 30 ............................................... GCCAGTCAAACTATATTGGAAATTTCGTAA 23200 47 100.0 30 ............................................... GATAAACCTAAAGGAAGACGAATGGAAGTC 23277 47 100.0 30 ............................................... TAAAAAGATAAATCTTTACAAACGTACTTA 23354 47 100.0 30 ............................................... AGCGTGTAAGTGAGTATATCCGTGTACACT 23431 47 100.0 29 ............................................... GGCTACTCCCTTGATGTGGTCAACTCTAA 23507 47 100.0 30 ............................................... ACAATTCCCGCAATTAGGATATTTTAATAG 23584 47 100.0 29 ............................................... ACAATGGGAAAAGGTTTTCGACCTATACA 23660 47 100.0 29 ............................................... AGCCTAACAACTGATACAAATCTTTGCGC 23736 47 100.0 30 ............................................... ACGTTCAAAGGTCAACCACTTGGCGCGCGT 23813 47 100.0 29 ............................................... GACCTACTCCAAGTATAAGTACAAGCGTA 23889 47 100.0 29 ............................................... TACTTGAAATATCAACGGCATCTGCTGAT 23965 47 100.0 30 ............................................... TACGCCTGAAATTGATGCACTAGGTTATGA 24042 47 100.0 29 ............................................... TACTATCATTAATAAAGGTGCTGCAAAGT 24118 47 100.0 30 ............................................... AAGTCGTATGTTCATCATAGGAAAGACAAC 24195 47 100.0 30 ............................................... TAGAGCAAGTCAAGATAATTTTCTTCGTCC 24272 47 100.0 30 ............................................... ATCATTTTATAACTTGCCCGCTGTTGATAG 24349 47 100.0 30 ............................................... GGCTCGTCTCCCATTATGCACCGCTTCTTC 24426 47 100.0 30 ............................................... ATTCAAAGATGTGATAAAATTTGGATTGCC 24503 47 100.0 30 ............................................... TACAATTCGGGACGTATCTTCTTATCTACA 24580 47 100.0 30 ............................................... ACCCTTTGAAAATTCTTCAAGCCTTAACTT 24657 47 100.0 30 ............................................... TTGAGGTGGCTGTATTCACTTGTGAGTTTC 24734 47 97.9 0 .........................C..................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.9 30 GTTGTATTTGATAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Left flank : TGTTTTAGTGGGGAACAAAGAAGAATGGTTTATCCTGAATTATAAAGTCAATTGGTGGAAACTTATAGATTTAGTCAATATAGGAGTATGTGGTTAATGGTATTTTTTGATTTACCTACAGATACAAAGAAAGAGCGAAAGGCTGCCTCTCTCTTTCGACAGAACTTATTAAAAGACGGATTTACAATGTTTCAATTCTCTATTTACATACGCCATTGTGGTAGTAAGGAAAACATGGAGGTTCACATTAAAAGAGTCTCAACCATTATTCCAGAGTATGGAAAGGTGGGGATTATGGGTGTAACTGATAAGCAGTTCGAAGGGATTAAGCTCTTTTATGGTAAAAAACCACATAAGCCCAATGTTCCAGGAGTACAGCTAGAGCTTTTCTAAAAAGATTAAAGTTCCACTTTTGAAAGTGAAACTTTAATCTTTCTTGCATTTTCCTTTTCCGTAAGTAGAGAGTATATTGCTTATAATCAATGTTTTATTCTACTTGT # Right flank : CCTATGAGATGGTTTCCGTAGTTCTTTGCCGATTTATTTATACCCTCTCTGCTTATTTTAACGAATATATACACGTTTTGTAACTGATAATTGATGTGGTAATTCATTTTTATTGTAACTTTGTCTTGTGTTTAGGACATTGGAGAAGTTGAGTGCTTATTGGAGTAAGACTAAATAAGGAGACTCCCCCTAAGTTCAGCAAATTATAAGAGCCAATATGACTTTATTGCTTTCAGATAACAGACAAGACAATGAGCAAGCAAGTATTTCAGACAGACTCCCGTCAGCGTTGGAGTTATTTTAAGTGGACCCTACGTGTAGTCCTTACGATTCTCTCACTCTTTGGAATCGTTTTCTTAGCAATGTTTGCCTTGGAGGGTAGCCCGCAGATGCCTTTCCATCACGACTATCGAAATGCGGTGTCAGCCTCATCTCCTTATACCAAGGACAACAAGACGGCAACACTCTATAAGTCGTTTCGTGACTTCTTCAAGGAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATTTGATAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //