Array 1 147993-144542 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGRM010000008.1 Halomonas sp. ISL-104 Halomonas_sp_ALS10-contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 147992 28 100.0 32 ............................ TGCTGCTGGCAGAGTTGCACCATGCGGGCGGC 147932 28 100.0 32 ............................ CGTTGGCTGGCAGTAGAAGGCGACGACGAATT 147872 28 100.0 32 ............................ AGGGCCATTAGCACATAAGGGTCTTTAATCTG 147812 28 100.0 32 ............................ GCCAGGGCGTCGCGTTCTTGTATGACGGCTTG 147752 28 100.0 32 ............................ AATTGATGGTGGCGAACCGTACACGGGTTGGA 147692 28 100.0 32 ............................ TGTCCGGTGGGCGCGCTATCGGTGATATGCAC 147632 28 100.0 32 ............................ GGGGTAATGTCGCAATCAACCATATTGGCTCC 147572 28 100.0 32 ............................ GTGCAAACGCTTCAGCAATGGGAGTTCGCCGC 147512 28 100.0 32 ............................ CAAGGTCGTTTAGTTTTTTGCGGTTAGCTCCG 147452 28 100.0 32 ............................ AGCCGGGCAGTGCAGGCAGAACTGGAAAGTAG 147392 28 100.0 32 ............................ AGCAGCACGCCACCTGCAACACCCCAACCAAT 147332 28 100.0 32 ............................ CGGATGATTGGGCGGTTGCGGCGGGGATTGAG 147272 28 100.0 32 ............................ AACGCGCCCGCTTCAATATGCTGGATCTTGCG 147212 28 100.0 32 ............................ TGCGACAAGCTTAGCATTCACGAAAGATCGTT 147152 28 100.0 32 ............................ TCAAAACTGAACAAACTGGTTGAAAGGCACGG 147092 28 100.0 32 ............................ TGATTAGGCATAGCCTTCGCGAACTCTTCCGG 147032 28 100.0 32 ............................ TGCACCGAACGCACCCGCTCCTGGTATGAAGA 146972 28 100.0 32 ............................ TCGCAGCGCAAAACGCCAAGGCACACGCCGCG 146912 28 100.0 32 ............................ CAGCTGAGCTCTTCGGTTTCGCTCTGCTTTTC 146852 28 100.0 32 ............................ CGGACGTTTACCTATGCAAACCACAACCGAAC 146792 28 100.0 32 ............................ AATTACTGTCACCGCTGAACATTACGGGTACG 146732 28 100.0 32 ............................ GATAACGTTAGGACGGCGCTTAAGTTTGTACG 146672 28 100.0 32 ............................ GGATGCAGCGCCCAGCAAAGCGCTAGCAGCGC 146612 28 96.4 32 C........................... TGCTGCCGCCGCCCGGTCAACTGCTGAAACTC 146552 28 100.0 32 ............................ TGGTTAAGCAAGCACGCAGGTGGCACTCACAA 146492 28 100.0 32 ............................ ACCCCCAGCATATCAACGACCAGCCAGCACGC 146432 28 100.0 32 ............................ ACGAGCACGTCCAGGATGTTGGTCTTGGTTAC 146372 28 100.0 32 ............................ TAGATGCGCTCGCGCCTCCAAGCCTTTCAGAT 146312 28 100.0 32 ............................ GGCACCGGCGGCGCGGTGGTGGGCTGCATTGC 146252 28 100.0 32 ............................ CACAAAATAGGCCACCGCCCCAACTGGAAACA 146192 28 100.0 32 ............................ AAAAAGGTGGGGTATCGAAAAGCGCACTTAGT 146132 28 100.0 32 ............................ GAAGAAAGGAGAGCCGACGAAGACCTTCGGGA 146072 28 100.0 32 ............................ GGATCTCCCAAGCCGTAGGGGCGCGCCACTGT 146012 28 100.0 33 ............................ CCGCTGGGCGGCAATACTCGCACTGTTGACGAT 145951 28 100.0 32 ............................ TATGCCCGAAATGCCCCCGCTGCCGCAATTCC 145891 28 100.0 32 ............................ AAGTCGCCACGGCGTTGCAGCAGGTCAACGCC 145831 28 100.0 32 ............................ AGCGAGCGGAATATGCTGACGCCAGAGATTTG 145771 28 100.0 32 ............................ TGATCGACCAGCGCTTGCTGGATTTGCTCAAT 145711 28 100.0 32 ............................ TTCCTCTTTGGATATATTCAGCTGCTTAACGA 145651 28 100.0 32 ............................ CTGAAGGCAACTTGAACAAGGAAGACGTTTTA 145591 28 100.0 32 ............................ ACAGCGCCGCCTTTTTTCTATCTGAATTCGTA 145531 28 100.0 32 ............................ AGTGGCCGTGCGGAAGTTGGGCACCTCTGCGT 145471 28 100.0 32 ............................ GAAGCGCTGGAAAAGATCGAATCGCCGCTGGC 145411 28 100.0 32 ............................ AATTCGGACTCATTTATTCAGAGTTAGGTTCG 145351 28 100.0 32 ............................ GGCACGCGGAGGATCAAGCCCTTCACGTCATA 145291 28 100.0 32 ............................ TGTTTAGTCCCTACAGTGTAACGACTATTGTA 145231 28 100.0 32 ............................ AGCATCGTGATATGGCCCGGTAACGCCAAGGC 145171 28 100.0 32 ............................ TGCAGCCGAACAAGAGAACCAGGCTGACGAAT 145111 28 100.0 32 ............................ GCTCGGCTGCTGGCAGTAGGTGCGTTCGGAAT 145051 28 100.0 32 ............................ ATAAGAAGAGCTTTCGAGCGCTTGCTGTACGC 144991 28 100.0 32 ............................ AGACAAAATAAAACCGCCTCTTGGGCGGCTAG 144931 28 100.0 32 ............................ AGCGACACGGTTTGCTCGCCGATAATGCCGCG 144871 28 100.0 32 ............................ GTGTACATTTCCGACCAGCCGCCCGACGACGC 144811 28 100.0 32 ............................ GTGTACATTTCCGACCAGCCGCCCGACGACGC 144751 28 100.0 32 ............................ TGGTTAATGCCACGGACGGCATACCTGCCCCA 144691 28 100.0 32 ............................ CACGAGGATCGTTGTCCCGGTCTTTTCGGCAC 144631 28 100.0 33 ............................ AGAGGCGCAACTAGTCTTTACCATCGACTACAC 144570 28 78.6 0 .TG........CT.......T.....T. | G [144548] ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.6 32 GCTCGCTGCCGTGCAGGCAGCTCAGAAA # Left flank : CGCGTTTGCAGCAGCTAATGAGTGCGGACTGGCTAACCGGTATGCGTGATCACGCTCAGGCGAGCGAGGTGCTTGCGGTGCCTGCTGGTGCTCAACATATCAACGTGGCGCGTAAGCAGTTCAATACGGGCAGCCCAAGTCGTGCCAAGCGCTATGCCAAACGGCATGACATCTCGGAAGAGGAAGCGCAACAGATTTACGCTAAGTTGGCCGAACGGCGTATTGAGCTCCCATTTGTGCAGATCAATAGCCGCTCCACACAGCAGCGCTTTAGCTTGTTTATTGAACATGGCAAACCGGCCGCATCTGCCACGGAGGGCACGTTTAGCCATTACGGCCTAAGCCCCAACGCCACGGTGCCCTGGTTTTGACCCTTTTTTTCAGCGATAAAATAGGACACTAATAATCAACCACTTAGCGGTATCGCTCAAAAAAGGGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAACACATTAATTTTGATATGCTCTA # Right flank : GATTTAAGGTATGTGCATCTGGCACCGCTGCGCGGTGCTTCCGCGGGTGCGCTGACGCTTACGCCGCGCTACTCGAAATGTGCACTGGGCGAGTAAGGTGGTCTGTGAACTATGATACGACTTAATGCTCAACAGGTTGAAATGTGACCGCTTCATCGAAACCGTACATGCATTGCTCTGGAAAGGCGTGCAGCTCGTTATCAGTCTCAATCGCTGCTGCGCGGCGGGCATCTCCATACGTTTCGTTCATCAGTTCAGGTAGTAATGCTTTCAAGCTGGGGTTGTCGTTAAGCAGGCGGGTTGTTTTGGCTTGAGCATCGATGATCGTCAACCGCCAGCTACGTGAGCGCTGTTCAGGCTGGTGATCCCATTTAAGCAGGTGCATTAACAGGCGAACCAGTTGACTGACCAGCAGGCGCCGTTCAGTTTTGCCCATGCTCTCAATCTCCTCGGCTAGATGCTCAAGATCAAGTTGTTCCAGTTTTCCAGCCCGCAGAAAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCGCTGCCGTGCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //