Array 1 3312120-3314707 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013322.1 Klebsiella pneumoniae strain CAV1193 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3312120 29 100.0 32 ............................. GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 3312181 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 3312242 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 3312303 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 3312364 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 3312425 29 100.0 32 ............................. CCCGGAGGAAACGTGGCAACAGTTCAATACCC 3312486 29 100.0 32 ............................. AACGGAATTCAGTGGAGAGATGGGAAAGGTAG 3312547 29 100.0 32 ............................. AGGACGGCGAGCTGATCGCCGGACACGGTCGA 3312608 29 100.0 32 ............................. GGATACAAATCCAAACAGCGAGCCATTTTCCT 3312669 29 100.0 32 ............................. TTTATCGGACCGGGCGCGGACACGCAGACAAC 3312730 29 96.6 32 .............T............... GCGGGTTAGTTATCCATGGTGCATAGGGGCGA 3312791 29 100.0 32 ............................. TCACTTGATAGTTTATCTCGCCGCCGTGGCGC 3312852 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 3312913 29 96.6 32 ............................T TTTTTTGACGCGTTCGGACTTCAGGTAATATT 3312974 29 100.0 32 ............................. GGTTTACCAGCGGTAAAACAGCAGGAAGGAGA 3313035 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 3313096 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 3313157 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 3313218 29 100.0 32 ............................. CCAATTCATTAAAATACTCTGCAAGTATATCG 3313279 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 3313340 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 3313401 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 3313462 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 3313523 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 3313584 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3313645 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 3313706 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 3313767 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 3313828 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3313889 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3313950 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3314011 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3314072 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 3314133 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 3314194 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3314255 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3314316 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3314377 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3314438 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3314499 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3314560 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3314621 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3314679 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //