Array 1 1776471-1776890 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP033426.1 Lactobacillus crispatus strain CO3MRSI1 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1776471	    36	 100.0	    30	....................................	TAGAAGATGGTACAAATAAACCATTTTCTA	
   1776537	    36	 100.0	    30	....................................	AAATGCTTTTCACGATGGACCGGATTTATA	
   1776603	    36	 100.0	    30	....................................	AATGGGCGACTTCTTTTATTGTTGGGAAAC	
   1776669	    36	 100.0	    30	....................................	CCGTGAAAACGGCGTTTACATGCGTAAGAC	
   1776735	    36	  97.2	    17	..........G.........................	TATTAGCTTTTGCGGCG             	Deletion [1776791]
   1776788	    35	  80.6	    30	..ACC.A.C.G..-......................	CCACTATCGCGCCTGGAATACCTGTTTTCT	CGT [1776795]
   1776856	    35	  83.3	     0	.....................-...G.AG.C...A.	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  94.4	    28	GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC	                              	       

# Left flank :   CAAGCGCAAAGCTAAGCCTAAGGCAGAGTTTCCAACTGAACAGTCGCTTGATGCTTTTATTGGCATTCAGGCAATGAGCTACAATGACCGTTATTTCAATCGAATTCATAAAGGCTTTGGTCAGGTTCAGGACACCTTAGAATCCTACTTTGATTAAATAAATAATTAAAAAATCAATTTACGAGAAAGATCTATTTACACAAAAGATTTGACAGTTTCATGTTAACACCATATGCTATAATTGAAACAGTTCTTAAGATTCATCAAGAATATAATCTTGATAGTATTCCCGTGTTTTGTAATGTAGCTCATTACCTTGATGAAACACAGTTAAAAGAACTTAGTAAGATTGTTAGACAACTTAAATTGAAAATTATTTTAATTGAATTCACAGATAAGAAATATGGGGTAGCAGTCAAGGATGCTCAAGTTGCATATATTGATCGAGATCTTGTTGATTGGTATTAGACAATTGATTAAAAAGATATTATGAAATATCG
# Right flank :  CAGTAATATGCATAAATTTACAAATATTTTTCTGTAAATAAAAATCGCTCTAGAGAAACTCTAGAACGATTTTTGGACATACTTGATCTTAGTATCTATTATTACTTAGCGTAATCATCAATACCCAAGTGCTCCAAAATAAGTGCGGCAGTTTCTTCAATGGAGCGGTGAGCAACATTAATTACATAGCAACCTAATTTCTTATAAAGTGCTTGTGCTGATTCAAGCTCCTTGTTGATTGAATCCATATTAGAATAAGTAGTATCAGGATTCAAACCATAAGCGATCATTCTTTGACGTCTGATTTCGTTCAATACAGATGGATCGTTAGTCAAGCCAATAATCTTCTTAGGATCAATTTCGTAGATTTCTTTTGGAATGTGAGTTTCAGGAACAAGTGGTAAATTAGCTACCTTTAAGTTCTTATTGGCTAAGAACAAAGAAAGTGGAGTCTTAGAAGTTCTTGATACCCCAAGTAAAACAACGTCAGCTTCCAAGAA

# Questionable array : NO	 Score: 5.76
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-0.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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