Array 1 32712-29964 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJOMB010000036.1 Kineosporia babensis strain JCM 31032 36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 32711 36 100.0 37 .................................... GGGGACAGCATCATCGACCCGAGCACAGCACACTCGG 32638 36 100.0 37 .................................... GCCGAGTTCCGTGGTCAGACGGTCGATCACGTCGGTC 32565 36 100.0 37 .................................... GTGCGGGTTGTGGAAGAACGGGCGCCGGTCCAGGCCC 32492 36 100.0 37 .................................... GTCTGCCGCGCTGCTGCAACCCCCGGGCCTGGCCCAC 32419 36 100.0 36 .................................... CGGCGGCGGCTCCTGGATCGTCTACGAAACCCCGAA 32347 36 100.0 37 .................................... CGCTCGGCGAGCGTCCGGACGACCCGGTTGACCTCGG 32274 36 100.0 39 .................................... CTGTGAGCATCGAGTCCCTAACAGTGGTGATGCACCACT 32199 36 100.0 38 .................................... ATGTATGACCCGGCGTCTCCGTACACCCAGTCCTGCCT 32125 36 100.0 37 .................................... GCCTCCAGCAGTTCCTCGGGCGCCTTGTAGGTAGGCG 32052 36 100.0 36 .................................... AACGCCTCCGCGTACTTCTCCGGGTCCTCGCTGGCG 31980 36 100.0 38 .................................... ACGTCGGGGCGGAGGTCGCCGTGTCGCACGAGCTGCGT 31906 36 100.0 40 .................................... AACCTGCATATCCAATGCGATGGAAGTAACCCGCGTCGAG 31830 36 100.0 38 .................................... GTCACCTTGCCGGGCCTGCAGTTACAGGGGTGAACGAT 31756 36 100.0 37 .................................... CAGTAGCCGCCAGTAGTACGTCCGCTTCCCGTACTTC 31683 36 100.0 38 .................................... CGGTGCGTGAGAGCTTGTACCGCAACAGCATCCGGCGA 31609 36 100.0 38 .................................... CGGTGCGTGAGAGCTTGTACCGCAACAGCATCCGGCGA 31535 36 100.0 37 .................................... GTCGACATCGGCGCCCTGATCAAGAGCGGCACGGACA 31462 36 100.0 38 .................................... TTGTCGGGCCCGAAGGTGATGAAGGTGCCGTCGGCGGT 31388 36 100.0 36 .................................... CGCTAGGTCGTCCTCTTCGAGACGCAGCGGCATGAG 31316 36 100.0 35 .................................... GTCATGTACGTCGTCCTCCACGAGACGGCGGTCAG 31245 36 100.0 39 .................................... GACGCCCACCTCGGCGACATGCAGGCCGAAGCCGCCGGC 31170 36 100.0 38 .................................... GCCACCTCGAGCAGCACGTCGGCGTGGCATGGCTGGCC 31096 36 100.0 37 .................................... CTGGTGGTGCGGCGGGTCCAGGCCCGATGTTGTGGCG 31023 36 100.0 37 .................................... CGGAGAGTCCCGCCCGGGTGAGCGCCATTGGTGTACC 30950 36 100.0 35 .................................... TCGGCTTGTACGACCGAGGCTGATTCGGTGAACGA 30879 36 100.0 37 .................................... TCTCGTCTGCGAATCGTCTAGAACCACACCCCCGCCG 30806 36 100.0 36 .................................... TACTGGGTTCGCCAGGCTGGCGTCCACGAGGACCGC 30734 36 100.0 37 .................................... ACCCTCACATGATCTTCGCCGGGGCTACGGGGGCGGG 30661 36 100.0 37 .................................... ACCAGAAGCGCTCGAGCACCGGATGATGGGCAACCTT 30588 36 100.0 38 .................................... AAGCCCGCTGGCCTACGTCGAGATCGCCGGCACCAACG 30514 36 100.0 37 .................................... CGCCATTCGTCGGCGGCGACCGCCGCTGAGACGCGGG 30441 36 100.0 40 .................................... CCAGTACGGGAACAACGCATCCCACCTCGGATGCAGGGGA 30365 36 100.0 38 .................................... GACGACCTGTGGGTCCTGCCGTCCTGCCGCATCGACCA 30291 36 100.0 38 .................................... GACGGTGCAGCCGCGGGCGGTGGCCTGGACCTTGGAGT 30217 36 100.0 35 .................................... GCACATGGACTGTGCGGTGGTCGGTTACTCGTCGC 30146 36 100.0 38 .................................... ATCGCGAGCCATTGCTCGGCGGGCATCCGGTCTCGCCA 30072 36 94.4 38 .............T.................A.... CGGAACGCGATCCGGCAGCGGACCGCCGACGAACCGAC 29998 35 91.7 0 ............C.T..........-.......... | ========== ====== ====== ====== ==================================== ======================================== ================== 38 36 99.6 37 CCGTTCCCGGCCACCCGGCCGGGCCTCCATAGCGAC # Left flank : CACACCACTCACCACCCGCTGACCCCCAACGCCGGGAGGAAACATGGCCCGCCGCCGCCACCTGATCGCCTACGACATCCGCGACCCCACCCGCCTCAGGCGAGTGGCCAAGACAATGGAGGAGTATGGCGAGCGACTCCAGTACTCGGTCTTCGTCTGCGACCTCAGCCGAACCGAACTCATCCACTGCAGAGCCGCGGTCGAAGAACAGATGCACCTCACCGAAGACTCTGTAATCATCGTCGACATCGGCAGCCTGAACGGCCAGCAATTCACCTTCGTAGGACAACCCCTGAAGCTACCGAGCAACGGGGTACGGATCCTGTGAAGCCTGCGAGCGGTCCAATGACCGCCCGCGCACGCTTGAGCGCTCGCATGCAGGTCAGAGGCATGATGATCAAGGAAGCCTGCGGAGCTCACTGCAGAAACCCAGTCACGGATTGTGAGCGCTCGCAAGTTGCTGTAAAGATGCAGGTCAGCTACGCCAAATATGGCGAGCC # Right flank : TTGAGGGGAACGGGGTCGTCCATTCGCGATGCCCGTTCCTGGTCAGGGACTGTCCCGGTCAGGGGTCCTGTAGATCCGTTGGCCTGGTTGACCGTGGTGCTTCGACTGGGACGGTCGGTCGTGTGACGCAGTTGGCCGAGTTGGCTTCGCCGTTGGTCCTGTTGATCTGGTCAACAAGGAAACGGAGAAGGCTGGATAGCGGGTAGCCGGGCGAGCCGGTGTCTTCGAGTTGTGGAGGTTCGTTGTGGCTGGTGCCTCGCTGCCGCATCAAGAGCGAGCGGTGTGCTCGCGTTCGGGATGGAGGCCCGGTGGTGGGCTTCTTGCGGGTGTTGAACGTGCTGTCGAGGCCAGCCCTGTTCTTCCGGTGCTCTGGCCGTCCGGAATGGTGATGCCGGAAGCGACTGCATCGGGTGAAGAGCACAGACCCGTGACTCCCGCGGTTCTGCGCAAGGTGCTGATGTCGCCCAATACCTCGGGGGATCTGCAGGACGAGGTGTGGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCGGCCACCCGGCCGGGCCTCCATAGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.00,-15.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 58421-56556 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJOMB010000036.1 Kineosporia babensis strain JCM 31032 36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 58420 36 97.2 37 ..T................................. CAGCAGGATCTTCCGCGAGATCGGCGGGAGCTCACCC 58347 36 100.0 39 .................................... GAGCGTGGATGCGCCGCGCAGGCTGAGCCAGGTGACGGC 58272 36 97.2 38 ........................T........... CCGGCCGCGAAGCGAGAGTCCATCGAGCGGATGAGCGC 58198 36 97.2 38 .......................G............ ACGACCCCGACGTGCCGCCCCTTGCCGCAACCGGGCGG 58124 36 100.0 37 .................................... GCGCAGCCAATACCTCATCCTGCAAGACCTTTTCGGT 58051 36 100.0 39 .................................... GGGTGGCGGCTGGTCGGTCGATCGGATCATGCGTGAGGA 57976 36 100.0 37 .................................... GCACGCGCTTGGCCAAGTCCACGACACCACCCTTCGC 57903 36 100.0 38 .................................... GCGGGGCCGGATCTGCTGGCCGAGATCGCCGAGACCCA 57829 36 100.0 38 .................................... GCGCGGATCGCGCAGTCTGAGGATTCGGCCGCCGAGCT 57755 36 100.0 37 .................................... ACACCCGGATACTTCCGCACGTCAGGGTGCAGGCCAA 57682 36 100.0 37 .................................... CATGGACGAAGCCATGGAGGGACTGAAGCGCGTGACC 57609 36 100.0 37 .................................... AGTAGTGCGACTGCAGCTTCTTGCGGGCGAGCCGACT 57536 36 100.0 36 .................................... GCGGTCCGCTACCGAGGCCGGGGACGTCGAGGCGAT 57464 36 100.0 35 .................................... CTGGCGGGATTCGCCCGGCTCGTCGCGGATGTCTC 57393 36 100.0 39 .................................... GTGGGCGCGGGTTCGTCGGGTGGTGGGTCGGTGAGCCAG 57318 36 100.0 35 .................................... CTGGTGGACAGCATCACTGGCTCGCCGTTCGCGGC 57247 36 100.0 37 .................................... GCCGTCTGATGGCGGCCAAGGCGGCCACGGTGGCGGC 57174 36 100.0 35 .................................... GCACCAGTCGTCCGGTCGACAAGCCGGCCAACCAG 57103 36 100.0 37 .................................... CGCAGTTCGGGTGCCGGTCGAAGCCGCGGTTGTACTT 57030 36 100.0 38 .................................... ATGACTTGCCTGCCTTTTCCCATCCTGCGACGAGGATG 56956 36 100.0 37 .................................... CGGGCCGCGCGATGAGCAGCGCCACAACGTCCACCAG 56883 36 100.0 37 .................................... TTCCCCTCACGAACGCGCTGAAGGGCCTCACGGCCCT 56810 36 100.0 38 .................................... TCCTCCACCGTGATCACTCCGATGATGGTCAGCTCGTC 56736 36 100.0 35 .................................... GATCAGAGCGGCTGCAAGGCGTCTGTGTACCTCCT 56665 36 100.0 38 .................................... GTTGCCAGTTCCGAGCTGATGGTTCCGGCGTGGCACGA 56591 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 26 36 99.7 37 GTCGCTATGGAGGCCCGGCCGGTAGGCCGGGAACAG # Left flank : TGACCCGCCTGATCAACCACTGTCG # Right flank : GGCTCGCGCGTTACACGGGCCCTGAGCTGCGATTTTACAGCCGATTGCGAGCGCTCACGGTAAGTCACGGGGTTCAAGGTCTCCTGCGGCTGAATTCCTTGATCATCTGGGGTCTGACCTGCGTGCGAGCGCTCAAGCGTGAGGGCGACGGTATCGGAGCGCTCGCGGTGAAGCCATGAGGGCATCGGTTGCGGTTCGCTCGATTCTGAAACCTTTCAAGCGCCTCATTCATACCCGCGCTAACTAGGTACAGAGCATCAGAAGGAGGGCGAGGTTTAATCGAACGGAGCTGGCAGGTTCGCCGTAGCTTCAGGTTGATGTGGTGGGCAGCATCTCGGAGTAAGGGCGTGCTCAGCACGGCTGTGACATGGCTGCCGTGGCCTTTCTCGTTGTAGCGGATTTCATCCGGACACAAGTTCCGGTGGGGCCTTTCGGAGGACACTTTCATGGCCGCTCATCCTGGTTGGGGGATGGGAAGGGGCCTTGAGTATCGGTCGGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTATGGAGGCCCGGCCGGTAGGCCGGGAACAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.30,-16.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //