Array 1 157282-155569 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081493.1 Flavobacterium psychrophilum strain CHN46 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 157281 46 100.0 31 .............................................. TTACTCTGAATAAGGTTGTTTTGATGGCGTG 157204 46 100.0 30 .............................................. TTTATTCTTTACTCGATTTTAGAGAAGAAA 157128 46 100.0 29 .............................................. ACTATATAAAATCTTAAATTTCTAACTAC 157053 46 100.0 30 .............................................. TAATAATTAAATTTTAAATTATGGGAAATG 156977 46 100.0 30 .............................................. TTCGCAGGCATTGTTGCTTTTCATTCTTTT 156901 46 100.0 29 .............................................. AGGATATAATGATAATTATATGTCGGGCA 156826 46 100.0 30 .............................................. CGTTGGCTAATACTTCAAACCCCTCTTTTT 156750 46 100.0 30 .............................................. CGAGAAAATTTTTGATTTTTTCCCAAATGT 156674 46 100.0 30 .............................................. AACCAAAACCATGTTCAGGAACTGGTATTG 156598 46 100.0 30 .............................................. GTAGTTCTATCAATTGAACTGTCACTAACA 156522 46 100.0 30 .............................................. GTTTTACTTTTAAAGTTAGTCAAATAGCCG 156446 46 100.0 29 .............................................. CTTTTATAAGATAATTCATATCTATATCT 156371 46 100.0 29 .............................................. TCGCATTGATTAAACAAGAGCAGGTAGTT 156296 46 100.0 30 .............................................. TGGGGCTTATTATGTAACGCCCGAGAAGAC 156220 46 100.0 29 .............................................. TAACACATTACCCTCATTACCTATGGTGG 156145 46 100.0 30 .............................................. TTGCATCTTTTTTTTGTTTTTACGAAGATA 156069 46 100.0 30 .............................................. AATATACCTGTATATTGATTAGCCCAAACA 155993 46 100.0 29 .............................................. TAATGTATAGATGCGTTGTAAAATTATAC 155918 46 100.0 30 .............................................. CAAAAAGGGCAAAACTTCTATAAGCTAATC 155842 46 100.0 30 .............................................. CGTCTATAAAATCATTACTAGAAGCTCTTA 155766 46 100.0 30 .............................................. ACCAATTTTTGATACATCGTATTAAATCGC 155690 46 100.0 30 .............................................. CCGATACTATATTTTTTGCTGCAGGTTTAA 155614 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 23 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TAAAAGGAAATAATGATATTTTCTAGACCATCAATAATATTGTGTCTTTTAGGCACTAAAGCAGGTTCAAAACTACCGTCTCGATCTCTTGGTACTTTAATTTCATCTTCACCAAAGGAAGTTTTTATTTTCTTGGTTCCGTGTCCATTACGGTAATTACCATTGAAGGTTTTTTGATGTTTTTCATTGTCTAAATGTGCATCAAGTTCTGCTTCAAGCATATGTTCAACTGCTCGTTTGTGCATTTGTTTAAAAAATGAAGTTAAATCTTCTCCATTTTTAAAGGATTTGTAGAATTCCTTGTTGTTTAATAAGTTGTCTTTGTCTATCATAACTATGTAAATATATAAAATGTTAAAAAGTTATTTCCGAAAATTTTTGAGCTTTTTGAATTAGCTCAAATTTTCAGAATAACTTTTTAACTTACACACTTTGTGTTATACTGCCTATTTTAGCTTATAATTACCAACCAAAAAAAGATATATCTTGTTCAGGTAATG # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGCTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTTCGAAATTCACTGGCAATTTTACGCTCTTTTCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 159347-158692 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081493.1 Flavobacterium psychrophilum strain CHN46 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 159346 46 93.5 30 T....T...G.................................... TAACTTAAAATAAATAAACGCCATGACACA G [159342] 159269 46 97.8 30 ..........................................T... TCACGATCTAATGACGAAAACAATACAAGT 159193 46 100.0 30 .............................................. CCAAAATGGTTGTATGATTCTGAACTAATA 159117 46 100.0 30 .............................................. CAGTAGGAAAAAAAACAATTGATGAGTATT 159041 46 100.0 30 .............................................. TTCAAATTTACATGCACTTAACAGGTTTCA 158965 46 100.0 30 .............................................. AGACCCCTGTAAACGATTGTTTAGATATTA 158889 46 100.0 30 .............................................. ACACAGCTGAAGCACTTGACGAAATGATGC 158813 46 100.0 30 .............................................. CGTTGTTGGTTTGCGACTCTTGCGGATTTG 158737 46 89.1 0 .......................................G..ACTA | ========== ====== ====== ====== ============================================== ============================== ================== 9 46 97.8 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAAAATGGCATGTTTTGGTGGTTCTTCTAATGTTTTCAAAAAAGCATTAAATGCTGCAGATGATAACATGTGAACCTCATCGATAATATAAACTTTATATTGTCCCGTTTGTGGGGGGATACGAACTTGATCGATTAGATTACGAATATCATCGACCGAATTGTTTGAAGCCGCATCGAGTTCGAAAACATTGAAAGCAAAATCTTCGTTCGGGTCGTCGTAACCTGGTTGGTTTATTTTTCTGGCTAAAATTCTGGCACAAGTTGTTTTTCCTACGCCACGAGGACCAGTAAATAATAGGGCTGATGCCAAATGATTTGTTTCTATCGCATTTAGTAACGTATTGGTAATGGCTTGCTGCCCCACCACGTCTTTAAACGTTTGCGGACGATATTTACGAGCCGATACTACAAATTGTTCCATAAAAAAATATTCGAAAGCAAATATAATGGTAATAAGTGAAAATGCAAAAGTGAAAAGTGAAAAGTTTTAAAATGT # Right flank : TCCCGCAAAGTGTGTAAGTTAAAAAGTTAGGCTTGAATTTTATAATCTGAGCCTTTTGTCAAATATAAGATTAAATTGATTTAAAACAATACCCCAATTTTGTATTGGCATTGACCATTTTTTTGTTGCTTCTTTTAAAGCTAAATAAACTGATTTTAGAACCGCATCATCAGTAGGGAATGACATTTTATTTTTAGTGTATTTTCTAATTTTTCCATTTAAATTTTCTATTAAATTTGTAGTATAGATTATTTTTCGAATTTCTAGCGGGAAGTCGAAAAATACGGTTAATTCGTCCCAGTTTTCTCTCCAGGATTTGATGGCATAACCATATTTTGATTCCCATTTTTGAGCAAAATCTTCCAAAGCTAATGCAGCAGCTTGTTTTGTTGGTGCGGTATAAACAAGTTTCATATCGGATGTAAATTGTTTTTTGTCTTTCCATACCACGTATCTGCAAGCGTTTCTAATTTGATGTACCACGCAAATTTGTGTTTGTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //