Array 1 31480-34873 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADNA01000048.1 Fannyhessea vaginae DSM 15829 Contig65.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 31480 28 100.0 34 ............................ TCAGGATTATGTGATATTTCCTGCGCTAATTCTA 31542 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 31603 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 31665 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 31726 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 31787 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 31848 28 100.0 33 ............................ TAATATATGAGCATACACTCCCGATAAGTGGTA 31909 28 100.0 33 ............................ CGCACCAGCCTCTTTCGCGGCTGCCGTTGTAAC 31970 28 100.0 33 ............................ CAAAAGAGCCTGCAACAATTGCAAGCCCTGACG 32031 28 100.0 33 ............................ TACAGCTCCTCAAGACAATTTGCAGCATAATGC 32092 28 100.0 33 ............................ TTGAAAAATATCAGTTCGCTCTTAAAAAAATCC 32153 28 100.0 33 ............................ CAAGGTTATCGCAAACTACGATAGAGGCTGGGA 32214 28 100.0 33 ............................ CACGAACGGACACTATTGTGCGCGACAAGATAC 32275 28 100.0 33 ............................ TAAGTGGTATTCCCCACTGTATAAACGCGCTTA 32336 28 100.0 33 ............................ CCCATTTAGCGTCAAACCGAGCGCCATGTTTAA 32397 28 100.0 33 ............................ TTGCACCCAACACAGCTACAGCTACAGTGCCAA 32458 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 32519 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 32581 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 32642 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 32703 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 32764 28 100.0 33 ............................ TAATATATGAGCATACACTCCCGATAAGTGGTA 32825 28 100.0 33 ............................ CGCACCAGCCTCTTTCGCGGCTGCCGTTGTAAC 32886 28 100.0 33 ............................ CAAAAGAGCCTGCAACAATTGCAAGCCCTGACG 32947 28 100.0 33 ............................ TACAGCTCCTCAAGACAATTTGCAGCATAATGC 33008 28 100.0 33 ............................ TTGAAAAATATCAGTTCGCTCTTAAAAAAATCC 33069 28 100.0 33 ............................ CAAGGTTATCGCAAACTACGATAGAGGCTGGGA 33130 28 100.0 33 ............................ CACGAACGGACACTATTGTGCGCGACAAGATAC 33191 28 100.0 33 ............................ TAAGTGGTATTCCCCACTGTATAAACGCGCTTA 33252 28 100.0 33 ............................ CCCATTTAGCGTCAAACCGAGCGCCATGTTTAA 33313 28 100.0 33 ............................ TTGCACCCAACACAGCTACAGCTACAGTGCCAA 33374 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 33435 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 33497 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 33558 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 33619 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 33680 28 100.0 34 ............................ TTGGGCGCGTGGTGAGATAGGCTATTCTCGTTGG 33742 28 100.0 34 ............................ CACCAAAATTTGATAACCTCGGAGCCAATGTAAA 33804 28 100.0 33 ............................ TAATATACACCTTGATAATCCTGTACATGCTCT 33865 28 100.0 33 ............................ CACAAAAAAAGGAGACATCTGCCGCGCTTTCGA 33926 28 100.0 33 ............................ CGCCTTTAGGTAGGCTTTCAGTCAAAGTCACAG 33987 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 34048 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 34109 28 100.0 33 ............................ CGGAGCGTCCCATTTGCCTTGTAGCTCATGTGC 34170 28 100.0 34 ............................ TTATATACCGCAACGTTTCGATTGTACACTAAAG 34232 28 96.4 33 ............C............... CGTATTATATAAGATATACGCAACAATTAATAA 34293 28 96.4 34 ............C............... CAAGCAAAATACTACCTTGACACCGTAAACGATG 34355 28 96.4 33 ............C............... TATTTCTGTCTACGCTGTTGTTTTCGTTCCACT 34416 28 100.0 33 ............................ CGAAAGCATGACGGTCGCAACGTTCGCACGTAT 34477 28 96.4 33 .....A...................... CGGCGTTGGCACGCAATTGTACAAGGAGATATT 34538 28 96.4 34 ..A......................... CGCTGGTATAGATGTAACAAAGGTTTCAAAGCTG 34600 28 96.4 34 ..A......................... TAAGTTCATCTGCGTCTTGTGCGCTAATAGGTGA 34662 28 96.4 34 ..A......................... TCGTGGAAAGCAGCGTGTAGGACGTGGGATATTC 34724 28 96.4 33 ..A......................... TTGGGCACGTGGCGAGATTGGATATTCACGTTG 34785 28 96.4 33 ..A......................... TGGTCATTCTGTCATTGAATTTGAGGTAAAAAG 34846 28 82.1 0 ..A...................G.G.GA | ========== ====== ====== ====== ============================ ================================== ================== 56 28 99.1 33 GTTTTTCCCGCATACGCGGGGGTGATCC # Left flank : AACAGACGACAAAATCATAGAAATAGGCGCAATTAGAATTTGCGACAAGCAGGTAGATGACTATCAGTGTTTAATTAAACGGGATTCATTGAATCTTTCCCCAGCTATAACCCAACTAACTGGGCTTACCGATATAGAGCTCGCCAATCGGGGAGTAAATCCTAACTTGGCTCTTAATGGGTTGAAACAGTTTATAGGACATTTGCCTGTTCTAGGTTATAACATTGCGTTTGATATGCGATTTATAAATAATGAGCTACGCTCTATGAACGAAGAGCTTCTTGATAACAGAGAAATTGATGTAATGAGATTTATTAAGAAAGAAAAGATGTTCTTAGAGAGTTATGCGCTTGATAATGTTCTTAAAGTGTATGGAATATCAGCTACTGTTCCGCACCGGGCGCTTGGAGATGCTAAACTGATAGCAAAGCTTGCATTAAAAGTGAATAAAATTCTTGATGTTCTCTAGTTAAAGCAGCTTTAAACAGGGATTTTTAAGA # Right flank : ACCCCATCAACCTTGAGGTACATGGCGGTGTAAACGTGATTTTTACGATTGGTGGATTCGTCAAGTGTAAAGTTGAACAAGCGCATCTCTACTGGTTTGTTATGACACTTGCAACGTATGTTGTTAGTGTGTCACCTTAAAGAAAGAGCTTGAGGCGGACGCACGTGCGCTCATACCACGCCTAAACGCTAAAGGAGAAATATTACTGAAGACGACGTAACGAACGTGTAGAAGCGTTTACAAAGAGCTGTATTACGCATTCGATTAACTAATTGGTTGGATAACGGTAACTACACAGGGAGTAACCACTAAAATAATCTTGTTGAAAAATGTTGCAAGGATAATTCGAACGGTAAAAAATTGATTGTGAACGTGAAACCGAAATATTACGTCATACCGTTTTAAAACGGTGGAATTCTTATTTATATGTTATATTGTATAAAACACTTTACGCTGTAAAGTAAATGCTATAAATAGAATGTTAAAAGAGGTAATTATGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCATACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //