Array 1 16382-14523 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWVG01000052.1 Klebsiella pneumoniae strain KSND-3 Scaffold89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16381 29 100.0 32 ............................. TTATTTCTAAACTCAGTTTTGTTTCATGCAGT 16320 29 100.0 32 ............................. GAGGAGCCTCAGTTGCTGGTATCCAGTGCCGG 16259 29 100.0 32 ............................. CGTCACTGTTCTTCAGCAGTTAACCCAATCAC 16198 29 100.0 32 ............................. GAGAGTCCGACAAGAAAAAAGGGGAGAATTAT 16137 29 100.0 32 ............................. GCGACGACGCTCTGCTATCCCTCGCCGAAATG 16076 29 100.0 32 ............................. AACGCTCAAGGGCTGGGTTGTCCCTCGGGTGG 16015 29 100.0 32 ............................. TCCATCCTGACGGCGCAGACCATCGGCCAGCA 15954 29 100.0 32 ............................. GATGCCAACCTAAAAAAGCTGGGCGCTTTGGT 15893 29 100.0 32 ............................. CGCTGAAAATTCAGACCGACAGCCACATTGAT 15832 29 100.0 32 ............................. TACTGAAAGACGGCGACAAGGATAACGCGATC 15771 29 100.0 32 ............................. ACCCCTGGCTTTTTAGATACTCCAGTTGAAAG 15710 29 100.0 32 ............................. CACGTACGCAAAATTAACCGTTCCAAAACCAT 15649 29 100.0 32 ............................. ATGGCAAACCTTCGTAAAGAAGCGCGTGGCAG 15588 29 100.0 32 ............................. GCCGCAGACAATTCATGGTATGGATGGTCACT 15527 29 100.0 32 ............................. TCATTGAACAACTCACCCTGCGCATCAATGAG 15466 29 100.0 32 ............................. GTGTTCAGCCTCGGTAACTTCTACGAATATAG 15405 29 100.0 32 ............................. ACGGTCTTCAGGTGGCGCAATACGCCACCTGG 15344 29 100.0 32 ............................. GTGTTCCAGCATGGAGCAACTCCGGTGGCGAT 15283 29 100.0 32 ............................. GCGTTTTCTGAGATAACTAAAGCTCTTTTGGA 15222 29 100.0 32 ............................. ATTGATATGATGCATTATCATCCCTTCTTTTT 15161 29 100.0 32 ............................. TTCTCTTCCGGCCACTGGGTGAACTGCGGGTC 15100 29 100.0 32 ............................. CATCCCTGTTAACGTGTTCATTAGTCCGTTAA 15039 29 100.0 32 ............................. GCTGATAGCTGCCAGATAATTAGCGTCAAAAA 14978 29 100.0 32 ............................. CGGCATGAACTTAGCATTCAGGTGCAGTTTTC 14917 29 100.0 32 ............................. GCAATAACGCCCTTCGGCATCACGCCTAACAA 14856 29 100.0 32 ............................. TGAACGGTGCGCGATTCGTTCATCGCCATCTT 14795 29 100.0 32 ............................. AGCTCTGAGTTTGAAGAATGCCTGGCCGCGTA 14734 29 100.0 32 ............................. GGCAGCGCCTCGACTGCACTGCCGATTTTGAG 14673 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 14612 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 14551 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGCTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCGCGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //