Array 1 76694-76461 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGR010000006.1 Intestinimonas butyriciproducens strain BSD2780061687b_171204_A3 NODE_6_length_124384_cov_60.0904, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 76693 32 100.0 34 ................................ CAAAGATGTGATGATTTCCCTTGTTGTTGCGGCG 76627 32 100.0 35 ................................ CGGTCGTAGTCGCCGGTCTCGGCGAAGCAGGAGGC 76560 32 100.0 35 ................................ CGTCTGGAGGGAGACCGGGCCCTCTACGAGGCGGC 76493 31 84.4 0 ...................T-..T....C..C | C,C [76463,76484] ========== ====== ====== ====== ================================ =================================== ================== 4 32 96.1 35 GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Left flank : CGCGGGGATCTGGATGGGTATCCGCCGTTCCTGTGGAAGTGAGGATACTATGCTGGTGCTGATCACATATGACGTGAATACGGAGGATGCCGCCGGAAGAAGGCGGTTGCGGTGGGTAGCGAGACAATGTGTGAATTATGGGCAGCGGGTACAGAACTCCGTGTTTGAGTGCGTCCTGGACGCGGCCCAATACCGCCAGGTACAGGCAAAGCTGATACAGATTGCCGATCTGGAGCGGGACAGCCTGCGGTTTTATATGCTGGGCAACAACTACAAAAGCAAGGTGGAGCACTTTGAAATAAAACCGTCCTATGAGGCGGAGGGGGTACTTATGGTGTAGTGCGAGGACGGAGCGTGCAGCCAATTGCAGAGACGTTCGCACCTGCAAAAGTGCAGTGGAGAAAAGAAATTGCAAATGTATGGGCCGCACGAGGGAGAGAAAGTTAAAATTTGTGTGCAAGATCGCCAAAATAGATAGGGGAAGTTTGTGCGATTTTACT # Right flank : CAAAATGTGGTACGCTGGACAAGAAAAAATACCAGCAGTGAGGAGGAGCCCCAACGATGAGTTTTACCCTTCCTGTCTATCAGCCCCCTGATTTTGCCGCACTTGGTCTGGGGGACGCCCCCGATGTAAAGCTGGTCCCTGCGGAGCGGGACGGCGTGGTACCGGAGCAGTATCACGCCACCACCATGTTCCCCGAGTATTTCCGCCTGAACGGGCGGTGGGTGTTGGCCGAGGAGAGCCGCATGGACTGCGTGGCGGTATGCAGGGATGGGGCCGTCTCCATTGTGGAGTTCCGCAATGTGAAGAAGGGAGATCCGGTTGCCGTGGGCCGCACGGAGGATGGCGGTGAGGGAATTTATGTCCACACCGGCGGCTTTGGAGAGGAGGGCGGCGGTGGGGAGACCTTCTCCTTCCGGCAGGGACGCTCCAGGGAGACCGCTTACTCCATGGACTATGACTCCATTTACGAGCTTTTAAAGTATGAGCGCGACCATGGGAAC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.80,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 50934-48815 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGR010000007.1 Intestinimonas butyriciproducens strain BSD2780061687b_171204_A3 NODE_7_length_107871_cov_65.5779, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 50933 33 100.0 35 ................................. CACTGTGTTTTGTCATAGATGGTCAGCGGCACCCA 50865 33 100.0 36 ................................. ACGTTCCGGGTCTGGTAGATCTCCCACAGCAGCCGC 50796 33 100.0 34 ................................. CGGCTCCCGCTCAGGAAAAAGGAGATACCGGGCC 50729 33 100.0 34 ................................. GCCCCGTATCCGGCAAAGGCCGCCTTATCCTCCA 50662 33 100.0 34 ................................. GTCAGAGGTTATGGCCTCTGCCGGGCCTTTATTT 50595 33 100.0 32 ................................. AAAAGCTATCAGAAGAAGCGGCGGCTGACCAG 50530 33 100.0 34 ................................. TACTGCTGCTAAACTATCGCCCGCCCCGGAGGTC 50463 33 100.0 36 ................................. TCCAGGATGGAGCCCAGCTCCGTGAGGATGTACCAA 50394 33 100.0 34 ................................. CACCGTTACCGGGTACGAAACGGGGCCGGGATGG 50327 33 100.0 34 ................................. TTGTAGATGAAGCTCGTCGGGACGCGGAGCCCGG 50260 33 100.0 34 ................................. GATATGCCACTCAGCCGCAGTATTAGACGCAGCC 50193 33 100.0 35 ................................. TTTTATGGGCAGCGGCGCGGATCGGCGCGGGGGCG 50125 33 100.0 35 ................................. CTCGGAGTTGGGGTAGATGAATGTTTCGATACCGG 50057 33 100.0 33 ................................. ATCTACCCCAACTCCGAGGAAGTCGCGCCATAT 49991 33 100.0 33 ................................. ACCTGCTCGGCGTCATAGGCGCTGCCGGTGGAC 49925 33 100.0 33 ................................. GGCGCGGGGTTCGTATTCCTCCACGGCCTCCTT 49859 33 100.0 34 ................................. TCACGAGATGACTTCCTCTCGATGATGACGAAAG 49792 33 100.0 33 ................................. TCCTCCGCCCTGGCCATTAGGACACCAATATGT 49726 33 100.0 34 ................................. AAAAGCGTCTGGGCCGTCTCCAGCGTCTCAGACG 49659 33 100.0 34 ................................. CTCTCCATCGATTTTTTTATCTCTCAGGACAACG 49592 33 100.0 36 ................................. GGGGCGGTGATAAGGTCCTCTCTGTTGATCCTGTGA 49523 33 100.0 33 ................................. ATTCTCGCAGATGAGGTTTGCAGGGTGGCAGAG 49457 33 100.0 36 ................................. TCATTGCCGGGCCTCCCTCCCGGCAGCGGCACGCAG 49388 33 100.0 36 ................................. AACCGGCTTGCCATACCGATCATAGTAGCACTTGAG 49319 33 100.0 34 ................................. AGGACGGTACGCAGCTGCCCGGGCCTGCGGCGCC 49252 33 100.0 34 ................................. AATCGTCTGAAATGCCAGTGAAGCCCCTTGTTTC 49185 33 100.0 36 ................................. GTCCGCTTTTCTGGCCGGAACATCGTCCATGCTGAT 49116 33 100.0 34 ................................. CCCGTGCCGCTCCAGCAGTAATACTCACTCCCAG 49049 33 100.0 34 ................................. ATGGGAGCCACCGACGCCGCCCTGGGCAACGTCA 48982 33 100.0 34 ................................. ACCTTCCCCAACGGGTCCCGGATCGTGTTCGGCT 48915 33 100.0 35 ................................. ACCTTGCGCCGGAAGAGGCGGCAACCTTTGAGGTG 48847 33 81.8 0 ........................A..CTCC.C | ========== ====== ====== ====== ================================= ==================================== ================== 32 33 99.4 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTACCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGGGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAACGCGCAGAAAATCACCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGGAGAGGATATTTGTAAGAATTGTCTATTTTTCGCGCGAACAGCTTGAATTTTTAGCTGTTTTTGCT # Right flank : TTTATACAGTCGCTCACATATGGATAAAACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAAATGAATATCCAACAGGCCCAATGGTTTTTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATTGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCTCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCCTGGCGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAACCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //