Array 1 19187-19407 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOTS01000050.1 Pelosinus propionicus DSM 13327, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 19187 26 100.0 40 .......................... TGAAACTTCAAGAAAATATGAAAATCAACTTACTGAAATT 19253 26 100.0 38 .......................... TGAAACATAAAGCCATGTAACCAAAACTTTTTAATATG 19317 26 100.0 39 .......................... TGAAACTTTCTTACATTCTTTTATAGTGCCGACTTGATA 19382 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ======================================== ================== 4 26 100.0 39 GTCACGCCTTGCGTAGGCGTGTGGAT # Left flank : CAGACTCAATTCCCTCAGGTTCAACTTGAAAAAGGTACAGTAGCCTATGTACTTCATCGCTCGACAGAAAAAGTAGGACAATTCTTCTTTTATGAAAAATACCAAGACCAAGCAGCACTAGACTATCATGGGTCTACACCTTACTTAAAAGAAGTATTCAGCAACATTGCTGACTTACTTCTTGAAAAACCGGAAATTAAGCTATATGAAGAAGTAGCAGCCATTTCTCGATAGGTAATGTAAGAATAGTGAAAAATTCCTGCAAAGTAACTTACTTTGCAGGAATTTTGTCTTTTAATGGGAAATAATGAGGTAATCGGGAAAGACTCCTAATGCGAACCCTAAGTGCTCATCATTTTTGTGGGAGATTCGCAAGTTGGATATGATAAGGGGTTTGAGCATTTCTTATAACAAAATACTTTATTAAAATAAGGCACATTCCAGGGGTTCGCAAAATAATAGGATTCGACCTAGGTAGTTAGTGCATTTCAATATTGCCA # Right flank : TAAGGATACAAGCTGTTAGTCCTGTTGCATGCAAAAAATAGGATTCGCTAAAGTGCGAATCCTATTTTTATAATCACTATGTCTTAATGAGGAAATAAACTACTTCCTATCAGGAGTATCTGATCTTCCCACAAGATAATCTAGGGAGACATTGAAATAGTCGGCGAGGGCAACTAGCGTCTCGGCTGAAGGAGAAGTCATAGTCTTTTCGAATTGCGTTATACTGCCTTTGCTCTTCAATCCTATGGCATCAGCTAGTTTTTGGGTTGATACTCCTTTTAATTCCCTGAGTTGTTTTAATCGAATTGAAAAAATATTTTTGTCGTACATGATAAACCTCTTGACGGTTAGTATTACTAACCAATATAATGGGATTGTAGGTTAGTAATACTAACCTATGTCGAAAATTATCTTACTGAAAATATTCGTGTTAACGTATGTAGTTAAGAATGATTATATAAATTTAATTATACCTGATATTGCAAAGAGTTCCTAGTCAC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTAGGCGTGTGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 29737-30421 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOTS01000050.1 Pelosinus propionicus DSM 13327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 29737 32 100.0 32 ................................ TCTTTGCCTTGTTTCCTTAATTGATCATCTTC 29801 32 100.0 34 ................................ CTGTGTGGTGCGAAGATTGCTGATGGGCATGATT 29867 32 100.0 33 ................................ AAGTATATAGGGGAATTTGAAGCTAATTCAAAA 29932 32 100.0 33 ................................ ATCGATATCCTTATTTTTTATATACTCGTCATT 29997 32 100.0 34 ................................ CTATAGGTTTATGTTGTTTCCATAGGTTGTATGC 30063 32 100.0 33 ................................ AGCAAATTTCAAGGAATTATTTACTCCAACTAA 30128 32 100.0 34 ................................ GATGTATTATGTCCCAAGCGTAAAAAGCTAGGTG 30194 32 100.0 33 ................................ TATGCTCTGCTATCAACTTATGTGTTAAACCGA 30259 32 100.0 35 ................................ ACTCTGCGTTAACTAATAAATCGAGTCTATTAGTG 30326 32 100.0 32 ................................ TTATTGTTGCCAGTCTAATGCTAGTTAAATGA 30390 32 78.1 0 ............A......G.CA...CA...A | ========== ====== ====== ====== ================================ =================================== ================== 11 32 98.0 33 GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Left flank : TTTAGAAGATTATCCGCCATTTTTCTGGAAATGAGGGTTTAGCAATGATGGTATTAATTACGTATGATGTAAGTGTGACTACCGATTCGGGGAAAAAGCGTCTTCGCAGAGTAGCGAAACAATGCGTCAATTACGGACAGCGAGTTCAAAACTCCGTTTTCGAATGCTTACTTGACCCAGCACAGTTTGCAGAGTTAAAACATCGCCTGGAAAGTATAATTAATCATGAGACGGATAGCCTGCGGTATTATTTCTTAGGAAGCAACTGGAAAAATCGCGTAGAACATGTGGGTGCGAAATCAGGATATGATCCAGAAGGAGTTCTGATGATCTAATGCGAACCCTAAGTGCTCATCGTTTTCCTGAGGTATTCGCAGGCTAGGAGGTACAAGCCTTCTTGACGTTTATGTAAGAAAAATCTTTTTTAAAATCGAAATAATTTTCTAGTTCGCGAAATCATGTGCTTTGACCCATGGTTTTCTTATATCCTATAACTGCCA # Right flank : ATAAGGTAGAATATCATTCCGTGTCTCCAAATATTTGGAGTTTATTCGAAGCAGTTAGACTGGAAGAAGGAATGGGAACGTACTGTATGGAATGATTTAAGGAAGCAAAGAGAAGCTTCGTGGGTAACATTATATTACGAATAGAAGCCGTAATAATAAGAGATGCATTATGCGTCAAAAGAGCAAAAAAACTTACAAAGTTGAGGGAGCATAATGATATTTGTGAAACATACCCCTAATCATGCAGGAGTGGCTATATATGGTGATTATTTAGATATTGAGGAACTATATAATACATTGCATGACGTTGTTGGTAAGGAGAATGAATATACTTCCTACCAGGGTGTTCGTATGAGAGTACTGGGGTTCTGTTATGAATTACGTCATGCTTTAATGGGTAACCGGGAATTTGAATATGTTGACAATGGTATGGATGAGAATCGGATGAAAGAGTTAGCAATGATTACGCCTAAGAAAAATATATATGTAGGCACGCATGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //