Array 1 149958-150668 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFZ01000005.1 Pelotomaculum propionicicum strain MGP Pmgp_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 149958 37 100.0 36 ..................................... TCATCCTTTCTGCCCGTTCGCCCGGGCCAGGCTAGA 150031 37 100.0 40 ..................................... ACGGACGAGACGCAGTAGTGGGAAAAATACCTGATATAAT 150108 37 100.0 39 ..................................... AGGGTAAAAAGCAGGTGGTTGCGGGTGCCGTATGGCCTG 150184 37 100.0 37 ..................................... CGAACTCCAGCACACTTTTGCCTTGCGCTTTGTTTTC 150258 37 100.0 38 ..................................... CATAGATATTGACAACCTGACTGTCGTCCTTCCAAATG 150333 37 100.0 37 ..................................... CAGTTCAAGCAACCAGCGGTGATATACTCATCCCCCT 150407 37 100.0 37 ..................................... TTTTCCATTTTACCACTTGATATATTAAAATAATATA 150481 37 100.0 37 ..................................... AAGAAATATCGTATAGATTTTGTTGACGAATTAATAC 150555 37 100.0 38 ..................................... GAAATAGCAACATTTACAGGAGTAATACTTTTAATAAT 150630 37 86.5 0 ..........................CCC..G....A | G,T [150660,150664] ========== ====== ====== ====== ===================================== ======================================== ================== 10 37 98.7 38 GTTACACTGCCGCTCCCGATAACAAGGGGACTGAAAG # Left flank : CGAGCCGATGGTACTGGATTTGAAATTCGGTGAGCCGAAGAAGTTTCACCGGCTAACCACCACAGGTTACGCTTTGGTTATGGAAGCGATTCACGAGTTTCCGGTAAACCTGGGCTGTCTTGTATATGCTGAGTTTAAGGGCGACCGCCTGGTTGTGAAAAAAGACATTCATATTATTGACGATGAACTCAGGCAGTGGTTTATTGAAGAGCGGGATAATAAAATGAGAATGATCTATGAGGAGATTGATCCAGGTTATGGAGAATGCCGCGATCATTGCCCCTATATTTTGCAGTGCCGGGGGTAAAATAAAGAAGGGTTAAAGAAGGGTTTTTAAAAATAAACTTGAATTCTCAAATAGATGTAAAAAACTTGGATTTTCGCAAATGAAGGGGGTTTTGATGCAGAAAAGGGTCTTTCGAAAAAAAGGACGTACCGAGCATTTCTTAGCATCTAATAAAACCAGTAATACCAATGGTTTCAAACGAAGTTCACGGTCG # Right flank : TGTCAAGCACCAATTTCGAGAAAACTGGAAAATATTTTGTCCTGGGAAAGCAAAAAAGGCAATAAAAAACTGATCCCAGATACTCAACTGGTAATAACTGGGCAACCAAGAAGGCGGTCACTTATAGGAGGCGATCAACCACCCCTCTTTCTAGGAATATATAGCTGGTTCGTGCGCAGCAAAGCATAAACCAGCCGGACCAGTTTTCTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACACTGCCGCTCCCGATAACAAGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 7878-161 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFZ01000063.1 Pelotomaculum propionicicum strain MGP Pmgp_63, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 7877 30 100.0 39 .............................. TTAGAGGAGGGCCTTTTTATTCCGCCCCGCCGCCCCCCA 7808 30 100.0 35 .............................. TATAATAATACTATTATTGCAAGAAATTTAATAAC 7743 30 100.0 35 .............................. TTACATAACAACATATTTGTTTTTGTGTTTCTAAC 7678 30 100.0 35 .............................. TGATTTTGAAAACATTGCAGAAGAGATGCTATTAT 7613 30 100.0 36 .............................. AGCGTCCAATACTCTCTAAGATATGCCCTAAGTTCC 7547 30 100.0 36 .............................. TCTCCTGTTATGTCATCAAAAAATTCATTATTCTTT 7481 30 100.0 38 .............................. ATTGATATTCTTTCACAACACACCCCCTTTTAACTAAA 7413 30 100.0 38 .............................. CAGTAGTGATTGACGAAGTACATGAAGCAAAAAATAGA 7345 30 100.0 36 .............................. TCGCAAAGGTGAGCGCACCTAGTAGCCGGGATAAGA 7279 30 100.0 37 .............................. CTGGGAGGCGGGCAAACACAAAATATGGATGCGCCCG 7212 30 100.0 36 .............................. TTTGACAACCTGGGCGAAAAGGACCCGGACACAATC 7146 30 100.0 38 .............................. TCTCCTCCAGCAGTCGGTAGAAAAACTTATACATTTCA 7078 30 100.0 35 .............................. AAACCGCTCTATCCAGCAAGGCCCCGGTGGACCCA 7013 30 100.0 37 .............................. CTGCAAATGGAATTGATACCTCTACTATCACAGCCAA 6946 30 100.0 37 .............................. ACCTCGCCCACTTCTTCCCGCAGACCGTTATAGCCCC 6879 30 100.0 36 .............................. GATCAAAACGTGATTATTGACATTACAAACAATAAC 6813 30 100.0 38 .............................. GCATATCATATGCAAGGGTTTGGTTGGAAAGAAGTTCT 6745 30 100.0 38 .............................. CCATGTGGACATTAAAAAGGATATACAAAACCAACCTA 6677 30 100.0 36 .............................. CGAATTTCTACCTGGTTTCTGTTATTGATGAAACAG 6611 30 100.0 35 .............................. TATATTACTACCGTCAGAATCGATTCTGGCGCGTT 6546 30 100.0 37 .............................. ACGGGGAAAGACAAGGAGCAGTGGTACAGCAACAAAG 6479 30 100.0 36 .............................. TGTCATATATAGAAGTATTTTCAAATATTCTGCTTT 6413 30 100.0 36 .............................. ATAAGTGGCTAGATAAAGTCATATCTGAATTAAATA 6347 30 100.0 39 .............................. GTTCTGCACACTTAAAATCTGTCGGCTGGACTAAATTCC 6278 30 100.0 35 .............................. AAGTTTGCTCTTGTTCTTTTGCGAAAAGGATATAC 6213 30 100.0 36 .............................. ATTCAATCCTGTTAGGACGCGGAGCACCAGTACAAA 6147 30 100.0 35 .............................. AAAGGGGTTCGCCGTCAGTGCCAGTACCAACAACC 6082 30 100.0 35 .............................. ATGAAACACTTTAATGCAAGGACAGCAGAGGAATT 6017 30 100.0 37 .............................. TGATTCATTATCTGCGAGTGCAAAAGAATTAGCGCAA 5950 30 100.0 37 .............................. TCAAGGGGTTGAAGGATGCGGTCAAGGGGATTATCTG 5883 30 100.0 37 .............................. GGCCTGGCTGTCAGGCCGGCCGGAGAGATAGCGTGTC 5816 30 100.0 35 .............................. TTAAGCACGACATTGCCGTCCCCGTCCCTTAGGAC 5751 30 100.0 37 .............................. ACAGACAAGGCGGTGCAAAACGATGACCAAAGCCCAA 5684 30 100.0 35 .............................. AAAATTCTCTCCTTTCCGCCCGTTCGCCCGGGCCA 5619 30 100.0 38 .............................. ACATACTCGACACTTACGGGGGTTTCGCGTACCTCGGC 5551 30 100.0 37 .............................. GCGAGTGGGAATTAATTGATACTATTGGTTAAGGGGC 5484 30 100.0 38 .............................. CCTGTACATGCAGACGTTCCCACATCGATCAACCCTCC 5416 30 100.0 36 .............................. TATTTTAAATAGTGAAGGTGTGGCGGATTACAATAC 5350 30 100.0 37 .............................. ACTGAAATAGATTGGATTCGCAGCCTACGCAATCAGT 5283 30 100.0 36 .............................. AGAAATGTGGCGATACATACGCTACCATATGGCACA 5217 30 100.0 35 .............................. CCCCCTTGGGGGATCCGGATGCTCCGCAGTTGTCC 5152 30 100.0 35 .............................. AAGATTATACTAGAAATAAAACTAATACAGAATGG 5087 30 100.0 36 .............................. TACCAAATCAAAGCTGTCAAGTCTTTCGGTGATGTC 5021 30 100.0 36 .............................. AAGGAGATCCCAATATACATCTGCCGTTGCAGTTGG 4955 30 100.0 36 .............................. TCTAATACGCCCTTGTTACTGTTTTGAGTTGTTAAT 4889 30 100.0 36 .............................. TGTGACACAATGCGCTTGTGTCACATTGGTCACTCC 4823 30 100.0 40 .............................. AGGCATTGCCGGAGGTATGGCAAAGTTGACAGTTTTATGA 4753 30 100.0 35 .............................. TCTAGTTGAATGGAAAAACCAGACTAGGCAGTCAC 4688 30 100.0 35 .............................. AGAGGCACACCGCAGTATAGGCAGTGGGTAGCCTC 4623 30 100.0 37 .............................. TCGGCTGGGACACAGCTGGGGAAATTCGTTGTTGTTG 4556 30 100.0 37 .............................. CGACATAAGGAGGGTTGTTGTTGATATGGCTGAGATT 4489 30 100.0 37 .............................. TCCCAAGGTCATTTCCTCCGCCGCATTTTGGATTTTT 4422 30 96.7 36 .......................C...... TTATAAAACCGGAAGATTGCTTAAGTACCGAATATG 4356 30 100.0 37 .............................. TCTGCGGACAGGGAGTTTTGCAGTTAAGCGAAGTAAG 4289 30 100.0 38 .............................. TATCAGCCAGGTTGATAATCGCTATCGTGAAAAGCTTA 4221 30 100.0 36 .............................. CTGTACTTCCGTTTTTGGTACTGTTGGTTGTTTGGT 4155 30 100.0 38 .............................. TAAAAACACTGAATAAGAGCTTTTTCCTGAACTCCTCC 4087 30 100.0 35 .............................. CCGGCCAGGTAAACTATACCATTTTTCATGTTTGC 4022 30 100.0 36 .............................. TAGGAAGCCTGAAAATCGGATTAAATGCAGCTTCGA 3956 30 100.0 35 .............................. TCCCAATATACCGCAACGTTTCCCTGGGACTGCTG 3891 30 100.0 36 .............................. TGTGACACAAGAGCATTGTGTCACATTGGTCACTCC 3825 30 100.0 37 .............................. TTTTTACTTTGTTTTTGATAAATTTTTTATATAAAAA 3758 30 100.0 35 .............................. TAATATAATTGCTGCTGGAGTAGGTATAACATTAA 3693 30 100.0 35 .............................. ATTTTTCATCGTCTTTTGAAACTCTAGCGTACGCA 3628 30 100.0 35 .............................. TCGTTGGTAAGATAATAGCTGTCCAGGCTCAGGAA 3563 30 100.0 35 .............................. CCGGACATCGTTTGATGTACTCCAGGCTGACCGGC 3498 30 100.0 37 .............................. CAAGATTTCCAAACCTTGCACCGCTGGCTTTGTTTGC 3431 30 100.0 39 .............................. CACTGTCCTGAGAACGCCACAGCCCGCAGGCCGGAAAAG 3362 30 100.0 36 .............................. AATTCGGCTTGTAGGGATTCGCCCCGCTTTGCGGCG 3296 30 100.0 36 .............................. TCTTCCTTATATTATGTAGAAAGTCTTCTGTGTTCC 3230 30 100.0 37 .............................. ACCGATGTGCTGCAAGAGGTTGTCCACCGGCAGGTGC 3163 30 100.0 36 .............................. ATAATTGTTTTAAAATATTCGTTTTCAATCCATTCA 3097 30 100.0 35 .............................. TACACTGCACCAGCCAATACAACGGCACAAATAAC 3032 30 100.0 38 .............................. TTTTCTGCGCCTTTCTGGACATAGGCGCAGGCATGCAT 2964 30 100.0 36 .............................. TTTTATAGCTAGTATGGGATATGCTTGAATAGAAAA 2898 30 100.0 36 .............................. AGCATAGTCAGGATATTGGTGATGTGCCCCCACCGG 2832 30 100.0 36 .............................. AAAATATTCTTTCCTACCCATCTTTCAAACCTTTTC 2766 30 100.0 36 .............................. AGCCAGATAAAGGCTGCTGCTGTGTCTGGAGGATAG 2700 30 100.0 37 .............................. CTTTGAGACCGGCGGATGCAAATCCTCCGGTAGCGCG 2633 30 100.0 38 .............................. CCTGCCCGGTCGCTTTCGTGGCGGGCTTCCGGATTAGA 2565 30 100.0 37 .............................. GCCCGGGCGATGACGTTCAAAATATCCTGCCTGGTTC 2498 30 100.0 35 .............................. CCGCCGCCGAAAGAAAAAATAGTCCCCCTGACGAC 2433 30 100.0 35 .............................. CGGCGAGCTTAGAACAGACGATATTTCGGCATGGA 2368 30 100.0 37 .............................. AATTCCCTTCTTCCACTTTTGCCTTTTGGCTACCTCT 2301 30 100.0 35 .............................. ATGTCCATAGGGTATAAATTTACTACCGTCAAAAC 2236 30 100.0 36 .............................. TTGATGTAAAAATCATTATGTCTGAGTATCCGCGTA 2170 30 100.0 35 .............................. TAACCTATATAATCTTTTTGTACTGGTGCTCCACG 2105 30 100.0 35 .............................. ATCTTCACCTCCGCCATAATCCCCAGGCGAATCAT 2040 30 100.0 38 .............................. ACCTATCCTCCAACCGCCCTTCCCGATCAGCTAAACAC 1972 30 100.0 35 .............................. CATTAATAACAGTTTCTAAAATGCTGCCATCTTTT 1907 30 100.0 36 .............................. AGGAACCGCCGGGCTACTTCGAGGAGCTGGCGGTAA 1841 30 100.0 35 .............................. CGCCGAAATAAACGGGCACAAGAAACAGGTCTACA 1776 30 100.0 36 .............................. TTGCGTCAGAAAACCGCCTATCATCGCTATACGGTC 1710 30 100.0 34 .............................. ATATCATGGCCAATGTCATCTACTCCAACAGTCA 1646 30 100.0 35 .............................. AACTAACCTGATTACGACAATGCGTGTCGCAATCC 1581 30 100.0 37 .............................. TCCTTGCTTTCTTCCTGAGCCTGGACAGCTATTATCT 1514 30 100.0 37 .............................. AAAGGCAACGTGGGGAATATGACAGCCCCCGTGCTGT 1447 30 100.0 35 .............................. GGGGTTTCGATAGTCTCTGAAGGTTTTTCTAGGTA 1382 30 100.0 37 .............................. TCAAGTATCTCTGTTTCAATATGTTCCCTTTCAATTT 1315 30 100.0 36 .............................. TCATCTCCCGCCGTCGGGTATATGAATTATTTCAAC 1249 30 100.0 35 .............................. ACGTTCAGTGTCTCGATAAATGGCTCAACAGTAAT 1184 30 100.0 34 .............................. GTTCATGACGGCGAAAAGGTGAAGGTCGAGAAGG 1120 30 100.0 38 .............................. CTCGCGACAGTACGGGCAGGAGTTTGAAGAACTAATCC 1052 30 100.0 37 .............................. ATTCATACTAACTTACTTATATTTAAAAATATACTAA 985 30 100.0 36 .............................. TCAAACTCTGAAGCCCACTTATTCAGATTATCCGGC 919 30 100.0 35 .............................. AGACAGGGGGTGCTTGCCAGCTACGGCAGCCAGAA 854 30 100.0 35 .............................. CAAGCACACTGAAAGCAAGTGTGCTTGCTAAATAA 789 30 100.0 38 .............................. TATTCCCCGCCAGTCTTTGATCGCCTCCAGGTGATCAA 721 30 100.0 37 .............................. AGATCGACAGCGACCCAATGGAGAAAGCGGCGACCGA 654 30 100.0 36 .............................. TATTCTTCGCATAAATCATTTTCTTCAATTATTTCC 588 30 100.0 37 .............................. AGGCTAATGGATTGTATAAGGTGCCCGATGGAATGCC 521 30 100.0 35 .............................. TTAAGAAACTAAACCTAATTCTTTTGCTTTAGATT 456 30 100.0 35 .............................. AAGAAGCTGGGCCATGATTATAGAAGTGCCAAGAA 391 30 100.0 36 .............................. AGTATAAAGCCGCCGAACGCGGTATCGCCGTGGTCT 325 30 100.0 37 .............................. CTACCTGGACGGGCAGGAGGTTTTCCCGGAGGATTTG 258 30 100.0 38 .............................. CTTTTTTGACCTGGTGTGGGGACAAGCGGATAGCATCC 190 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 117 30 100.0 36 GATTTTAGTTTACCTATGAGGAATTGAAAC # Left flank : TCGGTGAAAAAGAGTACAATGCGTTTATAGCCAGGTGGTAATAAATATTTTTGTGTGGTGTTTGCATTGTTCATAATTTTGGTTTATGATGTCAATCAAAAGAGAGTTGGCAAGGTATTGAAAAAATGCCGTCAGTATCTGCATTGGGTTCAAAACTCTGTTCTGGAAGGTGAGATTTCAGACACTAATTTAAAAAAACTGAAGATGGAACTGGAACGCATCATAAGAAAAGATGAGGATTCTGTTATTTTTTATAATTTAAGGACTACAAAATATTCTTCCAGGGAAATAATCGGTTTAGAAAAAGGCAGCCAGGAAAATATTATATAAATCTTCCCACCATTCTGTCGTCGACCTGCAATAGCGTATAAATGCTTTTAAATCGACGACAATAAAAACCATGATAAAACCAAATATATTAAGACTTGCTCAAAAATAGTTTAGAAGATTATTAATGAAATCCAAATTTAAAAAGTCTTATTTTTAGGGCTTTTTGACGG # Right flank : CAAAACTGCTGCCATATGGAATATGTCCGCTGGTCCTCGTATAATAGATTTAGGACCACCGAACAGCCATAATTCCAGTTAAGGAACTATATGGATGATGGATGGTAGTTTGGGAACCGGTTCCCTTAAATTACGGGTACCGAAGCCAATAAAATCAAGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 5724-14011 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFZ01000041.1 Pelotomaculum propionicicum strain MGP Pmgp_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 5724 32 100.0 35 ................................ ACGGGGTATTTGGGAGCGTGTTGGGGAATTGAGCG 5791 32 100.0 34 ................................ GACGTGACGGAGGATATGGTGGACTTCCGCATGA 5857 32 100.0 32 ................................ TTGGTAAGGGCAAGCTCGCCGTTCTTCTCGGC 5921 32 100.0 33 ................................ AAGCACCTCATCCATTTTCGCGTGCAGGTGTTC 5986 32 100.0 35 ................................ AGTACGTGCTCCGTGGCTTCCTCCAGGGCTGTCCG 6053 32 100.0 34 ................................ AATGGGCGGTATATAGGATTATTAATCCATTGCT 6119 32 100.0 35 ................................ CAGCAGCCGGCAGTCAACATCAATTACGATGATGC 6186 32 100.0 34 ................................ ACAAAAGCCGCGACATATCCGGCTTTCGCAATGC 6252 32 100.0 34 ................................ TCACCTCACCGCGGGAGATTAACTGTACTTCAAC 6318 32 100.0 33 ................................ ATCCCGCTTGCAATGAACCACCACGACATCGGT 6383 32 100.0 33 ................................ TTTGATGAGATAACCAACATGAGGAAAATCTTG 6448 32 100.0 35 ................................ AAAACGTGCAAATTAACATGGCCCGCCAGGAAGCC 6515 32 100.0 34 ................................ AGGCATGGAGTTGGGTTTATGCCATATAATGTCA 6581 32 100.0 34 ................................ CCAGGGGAAATAACAACTGGGGGAGCGATTGCAG 6647 32 100.0 33 ................................ ATAGTCGCGTGTGGATATGACCAGCCATTGAAC 6712 32 100.0 34 ................................ ATCCGCTACAGCAATAGAAAACTTGTGGCCAGTC 6778 32 100.0 33 ................................ CGGTTGATATCGAGGTAGCGGAAAAGCAGGTAT 6843 32 100.0 34 ................................ AGGACTCAAAGCTAAAGATTTGGTGGGGATCCCT 6909 32 100.0 34 ................................ CCACCTCCTCTTGTATAAGGGGTAATGGCAATAG 6975 32 100.0 35 ................................ CCTTACCCGCTCCCATGGCGCTCCGCACGCGGGGC 7042 32 100.0 33 ................................ GCCATCCCATGTAGAACCAGGCTTCCATCGCTC 7107 32 100.0 34 ................................ AGACAGGTTGACAACCTGGCCTGGTTGCGGGCCG 7173 32 100.0 34 ................................ CCGGAGGTGCAGCGTGGTTAGTTGGACATGCCCC 7239 32 100.0 32 ................................ CGGAAGTTAATCGAAGTGGCCACATCAAGAAC 7303 32 100.0 35 ................................ ACATCCGTATCGCGACAACCCGGCGGAAAACCATC 7370 32 100.0 33 ................................ AACCCCACCTATCACAAAAGCGGGGTGGGGGAT 7435 32 100.0 33 ................................ CATCGGCTGTAATAACTCGCTTTGAAGTGCGTT 7500 32 100.0 32 ................................ GCCTTATTCCTATGACGCGCTTAGTCCCGGCC 7564 32 100.0 34 ................................ CTATCCGCGGCGGCGACTGGGGCCACGGTGCCGG 7630 32 100.0 33 ................................ AGATCGTTAGAAAGGGGTGTTGCAATGTCCGAG 7695 32 100.0 34 ................................ ATCGCTGCTTACAACAAAGCTGCGCGACCAGTAT 7761 32 100.0 34 ................................ CCATCGTAACTTTGCTTGCGTTGGGTGCATGTCC 7827 32 100.0 34 ................................ CAGACGATGCTGCCGCTGGCCCGATGCACCGGCT 7893 32 100.0 34 ................................ ATGCCGCCGTATTTACAAACCCCGATTTGCGCCC 7959 32 100.0 34 ................................ ATAACTGAAGAGAGGTGATTTTTGTGGACACAGC 8025 32 100.0 35 ................................ TGGAACCATACTGTGTTTTGCTCCGGAAGGATACC 8092 32 100.0 34 ................................ ACACATGGAGGAAGAGAGGTGTTTACTCCGACTC 8158 32 100.0 33 ................................ GCTGGAAGAAGCACAGGAGGGTGTTTGTTAACT 8223 32 100.0 33 ................................ CCATGGTGCGCCGCATTTTGGACATACCTTTGC 8288 32 100.0 33 ................................ CTCTCTGACCGCCTTTATTCTGAGGTGGGCAAA 8353 32 100.0 33 ................................ CAGCCGCGCAGAAGCAGATAGTGGATAATGTAG 8418 32 100.0 33 ................................ AGACAGGTTGACAACCTGGCCTGGTTGCGGGCC 8483 32 100.0 32 ................................ ACGAGGCTGACACCTCCCGCTTCGCAGTCTCC 8547 32 100.0 32 ................................ CAATCGTGAAATGGACATAGACGTAGTGGAAA 8611 32 100.0 32 ................................ TTTAAACAGAAGAATTGGTGTAAATGTCATAA 8675 32 100.0 36 ................................ AAATCCCCCCCCGCTCCCAAAGGAGAAGGGCCAGGG 8743 32 100.0 33 ................................ GCAATGTTTGGGTCGGAACCTCTGTGGAGAACC 8808 32 100.0 34 ................................ TCCGGAAGCTTGAGCAACCGCAACCTGTTACTGA 8874 32 100.0 34 ................................ GTCCCTGGGACGGTCCTGCTCACACAATTACAGG 8940 32 100.0 34 ................................ ATGATTATTAGGTCATAGCGCTTATATGTGTGCA 9006 32 100.0 34 ................................ GCAAGTTGCGGCACGTTTGGTATCCTCCGATAAC 9072 32 100.0 34 ................................ AAGCGTGGTTAGCGGTCGGTGCCATGTGCCGTCC 9138 32 100.0 34 ................................ TCCCACCAGGCGCCAGCAGCATGCCAAGCCGTAC 9204 32 100.0 33 ................................ GTCCCTGGGACGGTCCTGCTCACACAATTACAG 9269 32 100.0 33 ................................ GGGCCTGATACTTGGGAGTAACCGCCTTCTTGT 9334 32 100.0 35 ................................ TCTCCGGTTCCCGTCGCCCTAGCCCTGGCGTTGTA 9401 32 100.0 34 ................................ TGCTGCATGTCCAGGGCCTTCAAAAGGTGCTTGT 9467 32 100.0 36 ................................ CTTAAGAAGAACCCAACGACGCCGACGACAATCGCT 9535 32 100.0 33 ................................ TGAATCTCCGAGTTGAAAGAGGCGTCGCCTTCG 9600 32 100.0 33 ................................ AGGGCCATGATTGCAGCCGCGACGTCTTCGGTT 9665 32 100.0 34 ................................ CCGCCTTGCCGAGGCAGAAGGACAATATCTCTTG 9731 32 100.0 33 ................................ ATCGAAGGCTTTCTTACCCAGCGCCTCCAGCTC 9796 32 100.0 34 ................................ CAATCGTGAAATGGACATAGACGTAGTGGAAATT 9862 32 100.0 33 ................................ CGTCCATCCGGGGCTGCTCTTGGCTCATTGATC 9927 32 100.0 33 ................................ ATCCCACTTGACCACTTGATAAACAGCAGGGTG 9992 32 100.0 32 ................................ ACGGAATACATCCACCATCAGCTCTATATATT 10056 32 100.0 33 ................................ CCAATGCGCTCCCGCCACCGCGAGTCTGATCGT 10121 32 100.0 33 ................................ TGAGGTGGGCAAACGGCTTGCTGCCCTTTTTGA 10186 32 100.0 33 ................................ CGCATGTCCTCCAGGGAATAACCCTGGCGCCAA 10251 32 100.0 33 ................................ CTGTTGGGCGTGTCAGCAACTCTCCTGTTGTGG 10316 32 100.0 33 ................................ CGCATGTCCTCCAGGGAATAACCCTGGCGCCAA 10381 32 100.0 34 ................................ CCTTACCGCTTGCGATTGAAACCATCCGACATGG 10447 32 100.0 33 ................................ TTTGCGCTCGGCATCGGCAAAAGCGCCTTCCAT 10512 32 100.0 33 ................................ ATAGTCACTTCTGGCAAACAAATCCATCTCTAC 10577 32 100.0 34 ................................ TCAAGTATAGCAGATTTCATTTTACATCATGCAA 10643 32 100.0 32 ................................ TGTCATTTTGTGCCACTAACACAAAATCATAC 10707 32 100.0 33 ................................ CCACTGCCTGGAGTACCACTATATAAATTTATC 10772 32 100.0 32 ................................ GCAATGGTTAAAAGCTATAAATTGGATTTTTC 10836 32 100.0 34 ................................ GCTGAAGGTACTGCTAATACTGATGTGGTAACAG 10902 32 100.0 35 ................................ AAAACATCTCCAACCTTTATTTTTTCATATTCTTC 10969 32 100.0 33 ................................ AGTCAACATAGAAAAGTTGGGTATGATTTTGTG 11034 32 100.0 34 ................................ CGGCGTTGTCCCAGGCCACCGATCTCGCCGCAAT 11100 32 100.0 34 ................................ ATCCAACAGGATGGGCCGGCACATCTCCACAAAT 11166 32 100.0 34 ................................ ATTACAACGCCAGGGCTAGGGCGACGGGAACCGG 11232 32 100.0 33 ................................ CTTAAAGCGGCGGGCTATCGGGTAATCGAGCAA 11297 32 100.0 32 ................................ AGGATGCCCGAGAAGAAATCGAAAAGATCAAG 11361 32 100.0 33 ................................ AGCCTGCGAGCCAGTTCGTCCCGTTCCTGCCGG 11426 32 100.0 33 ................................ CTTAAAGCGGCGGGCTATCGGGTAATCGAGCAA 11491 32 100.0 34 ................................ AAAGGAGGATTTAAAAATGAACTTTCCAGAATTA 11557 32 100.0 34 ................................ AATACTTCCTGTTTGTTTAATACCTTTTAGCATG 11623 32 100.0 33 ................................ AATCGTTGTGCTAGATGATACTGTCCTAACTCC 11688 32 100.0 34 ................................ ATAAATACAATAAAAAAAAGAATCGTCTTTAATC 11754 32 100.0 33 ................................ TATTTTATGTGTTAAGCGCAAAACTGATAATTT 11819 32 100.0 35 ................................ ATCAAATATTACTATTTTAAAATTAGCTTGCAAAA 11886 32 100.0 32 ................................ ATCATCGTGAGGGCCAAAATCAAAATATACTC 11950 32 100.0 34 ................................ AAAAGCGTCATGGGATTTTAGTTTACCTATGAGG 12016 32 100.0 34 ................................ AAAAGCGTCATGGGATTTTAGTTTACCTATGAGG 12082 32 100.0 33 ................................ ACTTCGGCACCCACGACGACGCAATCCGGGGCA 12147 32 100.0 35 ................................ TCCTTTCCGCCCGTTCGCCCGGGCACAGGCTAGTT 12214 32 100.0 34 ................................ ATTATAAGGAGCAAGTTTGCGCCGGCTTCTTTTT 12280 32 100.0 33 ................................ TCTCATCAACCTCAAAGTATTTCCCCAGCTCTG 12345 32 100.0 34 ................................ AAAGATCTCACTACCTGCTAACACCCTAAACAGA 12411 32 100.0 33 ................................ TACATGACACAGAACCGGAGCCACACCCTTTTA 12476 32 100.0 34 ................................ AACCGCTCTATGGTCCACATAATAGCCCCAACCA 12542 32 100.0 34 ................................ CAAAAAGAATATAATGCTTTAGATAACGAAAAAG 12608 32 100.0 33 ................................ TTTCTTAGTCAAATTTATCACTCCTTAGTAAGT 12673 32 100.0 33 ................................ CGGCGGCCAATACGGCACATTCCGGCGTTCTGG 12738 32 100.0 34 ................................ GTCGCGCTTAATATATGTTGGCCTGCCGCAGAGA 12804 32 100.0 33 ................................ TTCGCGACCAGTGGCGTGATTCCGGCTTCTCCC 12869 32 100.0 32 ................................ TGACTAATCGGAGTCATGGCCTGCTCTCGCTG 12933 32 100.0 34 ................................ CGAGAAGCTCACCGCGGAGGACAAAGAATGTTTG 12999 32 100.0 34 ................................ GACATGATTCGACAGGATATTACAGGAAATAGAT 13065 32 100.0 34 ................................ TGTTATAATTCCACGCACAAACAAACCAATCAAG 13131 32 100.0 35 ................................ TCTCAGCCGCCCATTTAGCGATTTGCCCAAGCCCA 13198 32 100.0 32 ................................ TGCCCGTTCGCCCGGGCCAGGCTGATTTTGGT 13262 32 100.0 33 ................................ GTCGGCCGACCCGCTGGCATCGCAATCACCTCC 13327 32 100.0 33 ................................ CGCATCAGTCGCGCCAAGCAGGCAATAATTCCT 13392 32 100.0 34 ................................ CGCGCAGACGCCAACACTCTGGTCATTATAGCCG 13458 32 100.0 32 ................................ ATTATATAGCGTTGCGACATTTTTTTTGGCCT 13522 32 100.0 32 ................................ ATTATATAGCGTTGCGACATTTTTTTTGGCCT 13586 32 100.0 33 ................................ TCCATAAGCCGGATTTGCCCGTTCCATTTGCTG 13651 32 100.0 33 ................................ CATATTTCATCATCTGGTGGACACGCCTCCCGC 13716 32 96.9 33 ..........T..................... ACGGTTATTCCTCCTTGCCCTCTGGATTAGAAC 13781 32 100.0 35 ................................ CGCCTTCGGGCGCAACAGGTGAGGCGCGCTGGCGC 13848 32 100.0 34 ................................ ATATAAGTATACCTCCTTATAAAATAATGATTTT 13914 32 100.0 34 ................................ GGTGACGGTGGTGTTGATGTGAACGGGACCCCGA 13980 32 96.9 0 ...............................A | ========== ====== ====== ====== ================================ ==================================== ================== 127 32 100.0 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : TGAGGATTATCCGCCGTTTTTCTGGAAGTGAGGTGTTTAATATGATGGTTCTTATAACTTACGATGTGAATGTAACAACAGTTACAGGCAAGAGCCGTCTTCGAAAAGTGGCTAAACAATGCGTTAACTATGGACAACGTGTTCAAAACTCGGTTTTTGAATGTTTGCTGGACCCAACACAATTTACTGAGCTAAAACACCGGTTAGAAAAAATTATTAACCCGGAGAAAGATAGTTTGAGATATTATTTTCTGGGAAACAACTGGAAAAATCGTGTGGAGCATGTCGGCGCTAAGGTTGGTTATGATCCGGAGGGGGTTCTTATGGTTTGATGCGAACCTTAAGTGAACATCATTTTACAGGTTGACTCGCAAGTTTTAAATAACAAAGGGATACCCGGCATTTTAAACAAAATTTTAATATTGTCTGATCTAAATATTTTATATGTTCGCTTTTTAATATGTTTAAACGATTGATTTTATTGCGTCTAGAAATAGACA # Right flank : AAATTAAGTTTAAACCATCTTCCAAAACTCTTCTTTCGTAATTTGAAGCTGATGTTTCAATATTTTCCGCCACAAGTTGGCTGGGATTTCTTTGCATACGGAATGGCTGACTCTTGTTCGTAAGATCTCGCCGCTCGATAATGCTTTTTCATAATACCAGTGGTCAGTATCCCTGATCATAATCCAACCGTTTTTCTCACAATACCTTTTAAGGTCACCGAATTTAGGAGGCATATTTATATCTCCAACAGGGACTTGATCTCCTGATCATTGTTACACAGCAATACCCGCAAAATATAAGGAAAATGCCCTTTACGGTTAGGGGCGTTCAAAAATAGTTGGAGACGTTCAAGGTAATCTTGCGCGTAAACTTTTAACTCTTGGACTAATTCATTTACAGCCTCATCTACAGTTGGTTTATTTACAGCAATATCTATTTCATTTAAAGCAACTGTGACAGAACCATCTTCTTCCGGTAGAATTTCCGGTTTTAAACGGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //