Array 1 1335408-1333854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023819.1 Faecalibacterium prausnitzii strain Indica chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1335407 28 100.0 33 ............................ GTAATAGAAATCAATGTACGCGTCATCGAAACC 1335346 28 100.0 33 ............................ CTACTTTGGTATGCGTGACAATGTGGAAGTCAC 1335285 28 100.0 33 ............................ CTTGCGGTACACGCTCTGGAGTTTCGAGGTGGG 1335224 28 96.4 33 .........................G.. TCATGTGGTAATGTGGTCTTGCTGTCTGTTCTC 1335163 28 96.4 33 ............T............... TACGGCGATGGTCGTTCAGGAAGTGAACAGCCG 1335102 28 96.4 33 ..............T............. CTTGACGAAGGATGCCTGACGGCGGTACTCAGA 1335041 28 100.0 33 ............................ TACTTAATCTTCAAATTTACCATGTAAAGTCCT 1334980 28 96.4 33 ............T............... CCACTCGTTCCAGATTTTCGCGTATGCGCCGAA 1334919 28 92.9 33 ............T.T............. TTAGCCAGGTTTCCCGGGCTTCCTCTTTTCTTT 1334858 28 96.4 34 ..............T............. CATCGAACAGGTCAAAAAGACCATGGAGAAAAAA 1334796 28 100.0 33 ............................ TAGTCTTGCATGGTCAGGCCGGTCTGCTTGAGC 1334735 28 92.9 33 ............GG.............. CTTCAACGCCTGCCTGACGGTCAGCAAGGCCTT 1334674 28 92.9 33 .......TT................... CGGCGGGCGCACCCGCAACTTGCCTCAGCACGA 1334613 28 96.4 33 ..............T............. CTACAAGTACCGCCAGCGCGGCAAAGTGGCAAC 1334552 28 100.0 33 ............................ CAGGCTTGCCACCGAATCGATTTCAGCCGGACG 1334491 28 96.4 33 ............T............... CGCGGCCATGGACGAGAACGTGAAGCTTTCGGC 1334430 28 100.0 33 ............................ TCTAACCGAATTCAGAACCACAACATAAAGGGG 1334369 28 100.0 33 ............................ CTCAATGTTCTTGCCGCCGTTGGCCGGAATGGA 1334308 28 96.4 33 ............T............... CCGAACGCCCGCAGCCACGCCGCCCCAGTAGTC 1334247 28 96.4 33 ............T............... CGCCACAGCGTCCAGCTGTCAAGCAGCAGCCAG 1334186 28 96.4 33 ............T............... CTGGACAACACGCATCGAGCTAGAAGCGCGAGA 1334125 28 96.4 33 ............T............... CATATAGATATGTTGCAGGATACGTCACAAAAA 1334064 28 96.4 33 ..............T............. TGAGCTGGTGCGTCACCGCATTGCGAGCTTTGC 1334003 28 96.4 33 ...........T................ GGGGGTGAAGCGGAACGAGACCCTGCAAGAGCA 1333942 28 96.4 33 ............A............... CTACACCAAGACCGCCAAGCTCAATGACGTGGC 1333881 28 85.7 0 .........A.............TC.A. | ========== ====== ====== ====== ============================ ================================== ================== 26 28 96.7 33 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : TGTACCTGCTCCTGCTCAGTGAGGAACAGCCGGATCTGACTGCCCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGGGGCACCCTGAAACCCTGCTATCTCGAGGTGGAGCAGGAGGAATGGCTGTGGGCGCAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAGGGGTCCTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGTCTGTTACCCTGCTGGTTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATCATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG # Right flank : ATTGACAACCCTGCGCAAAAAGCAGATAATAAGTTTATCTTGAATGCAAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCCCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCTGGTTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGTGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCCCACGAGGCCGGTGCCATCGAGTTCACGGGTCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACTGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACC # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : CTTTTCCCCGCCTACGCGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], //