Array 1 33814-30008 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJNR01000006.1 Klebsiella pneumoniae strain EuSCAPE_IE040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33813 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 33754 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 33693 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 33632 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 33571 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 33510 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 33449 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 33388 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 33327 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 33266 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 33205 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 33144 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 33083 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 33022 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 32961 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 32900 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 32839 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 32778 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 32717 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 32656 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 32595 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 32534 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 32473 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 32412 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 32351 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 32290 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 32229 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 32168 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 32107 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 32046 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 31985 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 31924 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 31863 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 31802 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 31741 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 31680 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 31619 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 31558 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 31497 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 31436 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 31375 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 31314 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 31253 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 31192 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 31131 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 31070 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 31009 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 30948 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 30887 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 30826 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 30765 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 30704 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 30643 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 30582 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 30521 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 30460 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 30399 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 30338 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 30277 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 30216 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 30155 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 30094 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 30036 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //