Array 1 1221392-1228199 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIZ01000001.1 Geobacter sp. AOG1 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 1221392 29 96.6 33 ............................A AGCTGATACTCACCCACAATGTCCGCGTCGGCA 1221454 29 100.0 32 ............................. AACGCCCCGGCGCATACTGCCTCGTCCTTCCG 1221515 29 100.0 32 ............................. CAGCAGACATTGACGCACTGATTGCTGCCAGT 1221576 29 100.0 32 ............................. GAAAGCCTCTTGATGGCGTTGTCATCGGTAAC 1221637 29 100.0 32 ............................. CTATCGGGGATATGTCCCTGTCGGACGAAAGC 1221698 29 100.0 32 ............................. GAAATGCAGTTCTTTAGTGCTCCCCACGTACA 1221759 29 100.0 32 ............................. AGTTGGCGAAGCGAGGATAAAAAAGAGGGGCC 1221820 29 100.0 32 ............................. CAACACCAACGACAACATTGAATTGCGCTACT 1221881 29 100.0 32 ............................. ATACGGGTCCACAGGCACAAGGTTGCAGTTCG 1221942 29 100.0 32 ............................. GCTCAGAACTGAACCCGGTGTTGCTGGCGCAA 1222003 29 100.0 32 ............................. ACCCGGAGGCGATAATCAGGCGGCTGCATGTT 1222064 29 100.0 32 ............................. GGGAACATCCTCAAACAGGGAGAACTCCACCC 1222125 29 100.0 32 ............................. GATGAACTGGGCGCACCGGTGGCGTACCAGGT 1222186 29 100.0 32 ............................. GGGAAAAGATCATCCCGGCCGATCAGAACAAG 1222247 29 100.0 32 ............................. GTAATGGCGTGGGGTTCGGGCTGGGTCAGGAA 1222308 29 100.0 32 ............................. ACCCTGGGGATTACCACCGAACAGGCGAGCAT 1222369 29 100.0 32 ............................. GAACAGGCCTATGACTGCCACCTGGTCACGGT 1222430 29 100.0 32 ............................. CTTGGCAGCTACCCACTTACGGGCATCGACCC 1222491 29 100.0 32 ............................. GATGGCATCGCCGAATTGGAAGTCGAAGCCCT 1222552 29 100.0 32 ............................. GCGAAGGCCGGCACGAACATGACAAAGGTTTC 1222613 29 100.0 32 ............................. AATGACCGTTATCGCAATAGAACCGGAACCGC 1222674 29 100.0 32 ............................. GCGGTCGAAGGCAACCAGCTCGGCCCGGATCC 1222735 29 100.0 32 ............................. CCGATCAGATCGGCCCGCCAGGTGGTGGGGGT 1222796 29 100.0 32 ............................. CTGGGGAACGGCCTCATCCTTCAATGGACCGC 1222857 29 100.0 32 ............................. GAGATTATTCGGATGAATCCCGTCCGCCTCAG 1222918 29 100.0 32 ............................. ATCCGGGGGCAATAATTAGGCGGTTACATGTC 1222979 29 100.0 32 ............................. CAGTGTTGCCGCAGGCCGAAACGGAAGAGAAG 1223040 29 100.0 32 ............................. GCGCTGGGGCCTGCGGTTTCGATATGGATACA 1223101 29 100.0 32 ............................. AACTGAACGGCGAGGATGAGCGCGAGAAGCGC 1223162 29 100.0 32 ............................. CCCGTGCCGCTTATGGCTTGGTGCATGGATAA 1223223 29 100.0 32 ............................. GAAACGATCCTCTACCCATTAGCCGAGGATGA 1223284 29 100.0 32 ............................. CCAGAAGTTCGTCAAGGGGGGTCATTGCCATA 1223345 29 96.6 32 ............................T GTTCGGCTGGGCGTTGAGCAGCATGTCCACGG 1223406 29 96.6 32 ............................C CCTGCGTACTTCGCCATATCGAACTCGCCCCG 1223467 29 100.0 32 ............................. TAGATTATTTTCCTCATTTCCGGGGTATCCGC 1223528 29 100.0 32 ............................. CACAAAGAACAGCCCTGCGATCTCCACGTAAT 1223589 29 100.0 32 ............................. TTCCTCTGTGTTGGCAGCGGTAGCCGCTAGTA 1223650 29 100.0 31 ............................. TCCAATGCAGCTATCCTGTCCCGACATATGC 1223710 29 100.0 32 ............................. CCTGGCGGCGTGATTGTCTGGAATGTTGCCGA 1223771 29 100.0 32 ............................. GGGCAGTCAGCAACGATTAAGAAACTCCGCTC 1223832 29 100.0 32 ............................. GACTACCTGGCGGTGAGCCCCTACGAGTCGAA 1223893 29 100.0 32 ............................. GCGCTGGACTCGCAGGCGCACGCTCCGGCCTT 1223954 29 100.0 32 ............................. TCGGCCGGGCTCTGCTCCGTAGAGATCTCCAG 1224015 29 96.6 32 ............................C CCTTCGCCTCGCGCTTGACGAGCTTGGCGGTC 1224076 29 100.0 32 ............................. ACCCAGATTCTCCTGAACAGCGCCCTCTGGTT 1224137 29 100.0 32 ............................. CCTCCTGTCGGTGCGGGGCTGGTGGCGATAGA 1224198 29 100.0 32 ............................. GCGCTGACCCATATCATCAACGAACAGCTGTC 1224259 29 100.0 32 ............................. TAGTGGATTTCACCCTGTACGACAGCCCCGTT 1224320 29 100.0 32 ............................. ACACGGGAATTCGTCTGCAGGATTACGCTGTA 1224381 29 100.0 32 ............................. ATGGTCTACACCAAGGGGACCGGCGCCGGCAC 1224442 29 100.0 32 ............................. GCACAATATGAGAACCATTGAAAATATAATCA 1224503 29 100.0 41 ............................. CTGCAACCGGCTTTGGTTATCATGGACACTCCCAATGGTAG 1224573 29 100.0 32 ............................. ATCAGGCTTTCGCTGCTCTGCCCACACAATTC 1224634 29 100.0 32 ............................. TTCACGATGAGTTTCCGTTCCTCGCTGTCGAT 1224695 29 100.0 32 ............................. ATATTTTGGGCAAGGGGTGACATAGCCTAGCC 1224756 29 100.0 32 ............................. GAGTTGTTTGCTGGCAGCGGTGAGGAGCGCAC 1224817 29 100.0 32 ............................. AAGGATGAGTTGCGCGGTATGGGATTGGGACC 1224878 29 100.0 32 ............................. CGACGAGCGGTTGCTGTTCGGCCAGTTGCTTT 1224939 29 100.0 32 ............................. CTCTATACTTCCCGGCTTGCTGAAAATTGTTA 1225000 29 100.0 32 ............................. CTGCAGATGATGCTGCAAAACTTGCGGCGGAA 1225061 29 100.0 32 ............................. AGCTTCACGCCCACAACGATACCAAGGATGAT 1225122 29 100.0 32 ............................. GTTGATTATCTAAGCTTCACAACCCGCCGTCA 1225183 29 100.0 32 ............................. ATACCCCCAGATATCGGCACAGGTAAAAGCAC 1225244 29 100.0 32 ............................. GTGATCGGCTCGCTGAACATGTCGGCTCCTTA 1225305 29 100.0 32 ............................. TACTGGACGGCAGCGGGGGGGACCAGCGCTGC 1225366 29 100.0 32 ............................. TTAACCCGCCTGGTAGGATGTTGTTTTATGGG 1225427 29 100.0 32 ............................. GCGGCGCGATCTGGAACGCGGGGCCCCAACTA 1225488 29 100.0 32 ............................. ACAGGGGAGCATCAGTTAGGGCGAGCACAAAA 1225549 29 100.0 32 ............................. CTGTCAATGGTGCTTGACTTGCTCATCAACTC 1225610 29 100.0 32 ............................. GACTGGAACCGGGGGCGACCCCCGAACTATAC 1225671 29 100.0 32 ............................. GCGGTAGCCATGCCCCGTGCATAGGACTGCCA 1225732 29 100.0 32 ............................. GAACATTTTGATAACGCCCTGTTTAATGATCT 1225793 29 100.0 32 ............................. CCAACCAGGACGCCATCGCCGCCGCCGAGCTG 1225854 29 100.0 32 ............................. CTGCTTCCAGAGGTTCGTTTTCCGGCTCTTCC 1225915 29 100.0 32 ............................. TAATCAGTAAAAAGTGAAACGTAAACTTACGC 1225976 29 100.0 32 ............................. GTGCAACCCGCCCTGCTCGGCCCGGCCTGTGC 1226037 29 100.0 32 ............................. TAATCGGCACCTACAATGCGGGCGCGTCGTTC 1226098 29 100.0 32 ............................. TCGAAACAGAAGAAAAGATCATCGTGGGCGGC 1226159 29 100.0 32 ............................. GTAATAAGGGCCGCCCGACAAAAACCGATCTA 1226220 29 100.0 32 ............................. GTTGCCGTTGGCGACGAGCAGCAGCTTTCCGT 1226281 29 100.0 32 ............................. GAGCGCAACCATGCCAACCATACGGGTAAAGA 1226342 29 100.0 32 ............................. ATGGTCGGCAAATACATGCAGGGCTACACAAT 1226403 29 100.0 32 ............................. GGCCAACCTGCGCGTCGACGTATTCAAGGACG 1226464 29 100.0 32 ............................. CCGGGAGTGTCATTCCACGATGTAGTCACAGT 1226525 29 100.0 32 ............................. CTGACATGTAGGGATAAGGCAAGGCTGGCTCA 1226586 29 100.0 31 ............................. TCGCCGGGGAGTATCTGCAAAAGGGCAAGAC 1226646 29 100.0 32 ............................. ATGGCATTATTCGGGTGAGGGGTATTCAAGTT 1226707 29 100.0 32 ............................. ATGGCATTATTCGGGTGAGGGGTATTCAAGTT 1226768 29 100.0 32 ............................. GCCGAACCAGAAGCACGATTATTCTTGAAGAA 1226829 29 100.0 32 ............................. CCGTGACATTGAAGCAGATCAGCGCACCGCAG 1226890 29 100.0 32 ............................. CCCACGATGCAGAGGTAGCGCGACTCGACAAG 1226951 29 100.0 32 ............................. GACATACTGAGCGGCCTATTCGGCGGCAGCGC 1227012 29 100.0 32 ............................. CCGTGCAGCTTCGTGCCGTACACCTTTTCCAC 1227073 29 100.0 32 ............................. GATAAGCAAGGAGATGGGCATACATATGACGC 1227134 29 96.6 32 ............................C ACGTCCCTGTGGGGTGGGTGGTGATGGCGGCG 1227195 29 100.0 32 ............................. TTGCCTTGCGTGCTGTCATTATCCACTCACCG 1227256 29 100.0 32 ............................. AACCCCCCCATCAGCAACGGATTGTTGAGATA 1227317 29 100.0 32 ............................. AGCCATGGAACAGACAGATACCACCGCGGTCG 1227378 29 100.0 32 ............................. GGCTGAAAATCAAGGGGCTGGCGCTGGTGGTT 1227439 29 100.0 32 ............................. ATCTATCAGGAGGTAACGTTCAACGAGGAGCG 1227500 29 100.0 32 ............................. AGGCATGGGAATGGGGGGCGGTTAACCTTCAA 1227561 29 100.0 32 ............................. GTCCGCGGAGTATCCAAATAGACTTTACGGAT 1227622 29 100.0 32 ............................. GACAACGTGGGCCGGCTCAAGATCAAGGGGAA 1227683 29 100.0 32 ............................. TCAGCATTACCGCCAACGCCGGGGGCGCTCCC 1227744 29 100.0 32 ............................. AAGGGCTGAAATCAATACACGCATTTGTCAAG 1227805 29 100.0 32 ............................. ACATGGCATCATTGAACAAGGTCCTGCTTATT 1227866 29 100.0 32 ............................. TGATGATCCAGATCGTCGGCAGGCCTTCACAC 1227927 29 100.0 32 ............................. CTCAATTTCTCGGTATTCGAGCTTTGCGACAG 1227988 29 100.0 32 ............................. TAGCAGCAAACGGCAGGTTGTAATACGCCCAT 1228049 29 100.0 32 ............................. GCCGACCCCTGGTGGAGCGGACTCATCCTGGA 1228110 29 100.0 32 ............................. AAATTTGAAGATTTGAAGGGGAAGACGCTTGC 1228171 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ========================================= ================== 112 29 99.8 32 GTGTTCCCCGCACGAGCGGGGATGAACCG # Left flank : CCAACCATCGAGCAGGTGCTTGCTGCTGGTGGGTTTGAGGTGCCGAAGGCGCACGAAGAAGCGGTGGCGCCGGCAATTCCCAATAAGGAGGGGCTTGGCGATGCTGGTCATCGTGGTTGAGAATGCACCATCCCGCCTGCGGGGGCGCTTGGGACTCTGGCTCGTTGAAGTGCGGGCCGGCGTGTATGTCGGAAAGGTCTCACGCCGGGTACGGGAAATGATTTGGCAGAATATCGAGAAGGGCATTGATGACGGCAATGCAGTGATGGCGTGGCAGACCAATAACGAGTCGGGTTTCGATTTTCTGACCCTCGGTGCAAACCGACGGATACCGATAGAGATGAATGGGATTAAGCTGGTATCATTCCTGGCAGAGCAGATGCCAGCGCAAGGTAGGAATGGTCTGTGATGGCTTGATTTGAGAGGTGTTACAGGTGGGCTTAGTTGGTAGATTATTTGCGACTGAATATCTTCAATTATTTTGAGGGAGTAGAAGAAGT # Right flank : GCGATGAAATAGGCATTGACCGACCAAGCTGGACCTCCTGTGGATAGAGGCCGTGGACCCACATACTTCCCTTGATAGTCCCTGCGAATCCGTCGCCAACAGGCACGAGTGTTTTTGTTTCAACTCCCGCTGCCAGAGCTACCGTGTACTTCATGAGGGGAATCCCACTCTCAGTCACTTTGGCAAGATTTACAGCCCTCCCGATTTCCCTTTCCCCAAGAAAGACCGGTATCCCGTAGCCCCCAGTTGTGTCGTGAATTGAATCCGTGCAAGAATCGACATGGCATGTGTCCTTGGCGTCGTAAAGGGGAACGCCTTTGCAGAAAATATCTAACGTCGTAGTTGCTATCGGCATTTCCTTCATACTGGTTGCCCCCTTAATATTGGTAGGTAGTCAATTCATCATGCTGCCTTACGGCGCTTGGTGAGTTTGGTCATTTCCGTTGCTAGAGTCCAGAGTGCTCGGTTGAGCCGGACATCCTCGGAGACCGATTTTACCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //