Array 1 13854-13218 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QYME01000054.1 Klebsiella pneumoniae strain N015.H-11 NODE_54_length_16976_cov_41.077, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     13853	    29	  93.1	    32	............TG...............	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
     13792	    29	  93.1	    32	............TG...............	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
     13731	    29	 100.0	    32	.............................	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
     13670	    29	 100.0	    32	.............................	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     13609	    29	 100.0	    32	.............................	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
     13548	    28	  89.7	    32	.....-......TC...............	ATGGGCTGGCGCGACTCAAATGCCCGTTTGGC	
     13488	    28	  93.1	    32	.....-......T................	CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA	
     13428	    29	 100.0	    32	.............................	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
     13367	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     13306	    29	 100.0	    32	.............................	CACTACCAGATCCGAATGGACACCCGTAATGA	
     13245	    28	  93.1	     0	.......................-....A	|                               	
==========	======	======	======	=============================	================================	==================
        11	    29	  95.6	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATGGGTCTTCCCCGATCATGGTGGGAAGACTCAGAACGCCATATTCAGTTTTCCATAGTGGAACATCACTCCCAGCTTAAAGCGCTCCCGGTTCCTGTATCCTCTGGCTTTTATTCTCAGCAGTCTGATCTTGCTGTTCAGCGCCTCTGCATTACCATTCGAGACACGATGATG

# Questionable array : NO	 Score: 5.83
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGTGTGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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