Array 1 1552-203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPJA01000029.1 Vibrio sp. ER1A contig_107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1551 28 100.0 32 ............................ TAAGTTCTATTACGGCGGCTCTAAATATCATG 1491 28 100.0 32 ............................ AATGGATGGAATCGAGCTATCGCGTGGGCAAC 1431 28 100.0 32 ............................ TACACAATCAGATAACGGCCATGACAAAGATT 1371 28 100.0 32 ............................ ATTCAAATTCTTCGCAATAATCATTTTTGGCT 1311 28 100.0 32 ............................ ATGACCAAAAGCGGTTTAATGCTTCCTCGCTT 1251 28 100.0 32 ............................ AACGCGATAATGTGATGATGCCATTTGTACGT 1191 28 100.0 32 ............................ GTAAGTGGTACGGTTGGCCCTGTTGTATCCGT 1131 28 100.0 32 ............................ ACAAAGATGAATCTCATGCCCAGCAACATTAA 1071 28 100.0 32 ............................ CTGCTAATTGGGTACAAACACCACAAATCGCT 1011 28 100.0 32 ............................ AACGAAAGTAGCAGTTGCATGAAATGGAGAGG 951 28 100.0 32 ............................ AAATTGCCGATCGAGTAATGGCGTTCGTCATG 891 28 100.0 32 ............................ TGCTAACAGCTTTAAAAACTCGCTTAATCCTA 831 28 100.0 33 ............................ CTTTGCGCGGATCTGTAAGTTGAAAGTGTCGAT 770 28 100.0 32 ............................ TCTTGTGACTCGCGCAACAAATCATCTGCGAA 710 28 100.0 32 ............................ ATGAGCCAATCAACACAAGTCACTATTGGGAC 650 28 100.0 32 ............................ TGACAGACGTATAGGTATTGATTCTAAATGGA 590 28 100.0 32 ............................ CATGAATCCCACCTGCCCCAAAGTCAAAAGTG 530 28 100.0 32 ............................ CGGTTTGCAAAGGTCCGCGTGGTGAAGTCAGA 470 28 100.0 32 ............................ ATGCATCCAACCCTGACGGCGGAGAATCGAGA 410 28 100.0 32 ............................ AACACTCGCCTTAACGCCCCAAAGCGCTTCGT 350 28 100.0 32 ............................ TGATAATCTAACGTACACATGATAGGATCGCT 290 28 100.0 32 ............................ TTAGCTGCATAGTACCCTTGTAAGCTTTCTTT 230 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 100.0 32 CTTCACTGCCGAGCAGGCAGCTTAGAAA # Left flank : GAGTTACTTATGGAACAACCTTGGTTAAAAGGGTTGAGAGATTACACTCAAGTTGGCGACGTGCTGCCTGTTCCATCCGATCTAATTGGTTATCGCACCGTTTCACGAGTGCAAAGGAAAAGCCCACAAAACTTGCGTAAGCGATCCGTTGCAAAAGGTTGGTTAACAGAGGAGGAGGCTCGGCACAAAATTCCTGATACCAAACAACCACAATTGGATTTACCGTATTTGCAGCTGCGAAGCCTTTCAAATAAAAACGTATTGCGTATTTATGTGAAGCATGGAGATATCATTCAGGAAGCCGTGAGAGGAGAATACTCTAGCTATGGCTTTAGTTCCCAGGCGACCATCCCTTGGTTCTAGCTTTTTGACCCTATTTTTTCTTCTGCCCGTAACTCATTGATTTTTAAATGGTGGGCAAGGTATTTAAAAAATAGGGTTTTTCTCACTTTTTCCCATCAAGCTCTTTAATAATCAAGCTTTCAGCGATAAACTTAACA # Right flank : ATTCGGGTGCTTCTTCATGAGATAGATGTTTCGAGAATGAATAGAAATGCTTCTTTATGACATTAAAAACACATTACACTTTGTACTGAATAAATGATAATTGTCCAAGGGTGTGCTGAAGCCGATCGCGGTAAACACACCTTTGTCCATCTTCGAGCTAGCTGATGCTGCTAGCTCAGATCTGTCGAGTAGACGACACTTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTTACTGCCGAGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //