Array 1 273647-279093 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFJF01000004.1 Acinetobacter baumannii strain 4300STDY7045730, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 273647 29 100.0 31 ............................. TAATCCCCGCTTATGCAGCCTTGCTTCACTT 273707 29 96.6 31 ............................T ATTTTTTATGAAGCCCGTAAACAGAAAAAAA 273767 29 96.6 31 ............................T TTTTCCCCTTTTTTAATTTTAGCACCTAATT 273827 29 100.0 31 ............................. ACATCAGTTATCTCTATCTTTGGGATCATAA 273887 29 96.6 31 ............................T TAATCGCACCCATCGCATCTTGGACATTACC 273947 29 96.6 31 ............................T CGGATTCGGTGGAATTAGAAACCCTAGACAA 274007 29 100.0 31 ............................. TATAAATTTAGAATTCCATTAAAGTCATTTC 274067 29 96.6 31 ............................T TAGGTGCAGCAAGCTCTAATTGTTTTTGAGC 274127 29 96.6 31 ............................T CTACCCTGAATCCTGATTCCTTTAACACTGA 274187 29 100.0 31 ............................. AGATAGGTCCAATAAACCCGATCACCGATTT 274247 29 96.6 31 ............................T TGAGGATTATGTCGATAACGAAAAAGCTAAT 274307 29 100.0 31 ............................. TCAACACCGACACGAGTTTGAGCCAATGTAA 274367 29 100.0 31 ............................. TGAAGCTGTTTAGCGAATTTGGAGAGCTTGC 274427 29 96.6 31 ............................T ACATGGGCTTTTAGCCACTCCAGAATCATGT 274487 29 96.6 31 ............................C AGAGCCTCCGCCTGTCGGTTTTGGTTGTGAT 274547 29 96.6 31 ............................G TCTTGGTCTTGGCTGCTTAACAATTCGGTTT 274607 29 96.6 31 ............................G TGAGCGAGATTACTTTGTTAATCAGTACAAA 274667 29 96.6 31 ............................C AGTGTAAATACGTACTGGAGGGCAAATGGGA 274727 29 100.0 31 ............................. CTATAGATTCACCCTATATAAGTTTTACTTA 274787 29 96.6 31 ............................C AGTAAATGTGGCTGCTACCATTAAGGGTATT 274847 29 100.0 31 ............................. ATATGACCACGGACACTTTGTATCACGTATT 274907 29 96.6 31 ............................T TTCATGCGGGCCTTGATTTCCAGATCAGCAG 274967 29 100.0 31 ............................. AGCGAACACCATTGCCATCAGCAACAGATTC 275027 29 100.0 31 ............................. GAACCTCCGCCTGTTGGTTTTGGTTGTGATG 275087 29 100.0 31 ............................. CCCAGCTAATTAGGCGCTCTTTGTATGGCTT 275147 29 96.6 31 ............................C CACTTAGAACGTACTGTCTTAAAATCGTTAA 275207 29 100.0 31 ............................. AAGAGCAAGCTGATATGTGGCTCAAGAACGA 275267 29 96.6 31 ............................T TAATTGGATCTCGTTTAAGTTGGGTGCTTTT 275327 29 100.0 31 ............................. TAATGCCAGCGCCAGAAATGGTGTCTGATAA 275387 29 100.0 31 ............................. GCCGCTAACGCTCAAGCTCAGGCGTTATTAA 275447 29 100.0 31 ............................. AAGGAGCCAGTTGCAGAGTGGATGCTGTTTA 275507 29 100.0 31 ............................. GTCTTGATGATTTTGTCATTCTCGCCGTGTA 275567 29 96.6 31 ............................T ACGGCGCGGAAACCAGTGGGGAAATGTATTT 275627 29 96.6 31 ............................G TTTGGTTGAGGTTGATGACGTTCTTAAATCA 275687 29 96.6 31 ............................C GTATGGAAAACCGTTCGTCGTGTGACTGATG 275747 29 96.6 31 ............................T ATATGAACACATTAATGTATTGCTCAACACA 275807 29 96.6 31 ............................T GAATTACGTGCATCATTGGTTCCAGCAAATA 275867 29 100.0 31 ............................. TCCGGTGAAGCCCCGAACATTTCAATGAAAG 275927 29 100.0 31 ............................. ATGTTATTTAGATCTGCTGTCTCCCAATCTT 275987 29 96.6 31 ............................T GATTGAGCAGAAACGGTTTTAGATGCAACTA 276047 29 96.6 31 ............................T TTTTGGATGATTAGGAGTTACATCACAACTT 276107 29 96.6 31 ............................T TGCATAGCAGCAATTGCAAACTGATCACGTA 276167 29 96.6 31 ............................T TCCAGTATTGGTTGTTATTCTTGCCAATACC 276227 29 100.0 31 ............................. TAAAGGAGCCAGCCATGAGTGAGTTTAAAGT 276287 29 96.6 31 ............................T GAATTACGTGCATCATTGGTTCCAGCAAATA 276347 29 100.0 31 ............................. AAGCATCAAATTGATTTTGATTTATGGGCAC 276407 29 96.6 31 ............................T GAGCCAATGTTGTAAGTCAGCGATACCAAAG 276467 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 276527 29 100.0 31 ............................. AGTAAACGTAATGAGCAGTTACAAGCTGCTA 276587 29 100.0 31 ............................. ACAACGGGTGAACCTGTTACGCCAAAACCCT 276647 29 96.6 31 ............................C TGATGCTCAGGATCCAAATGCACCTGATGTA 276707 29 96.6 31 ............................T TATGATGCTGTAGCGTCTCAAATCATGTCTG 276767 29 100.0 31 ............................. GTTACCACAAGTGATAACACAGCAAGACCAA 276827 29 100.0 31 ............................. ATTCGGATCTGATTAACTGGACTGTCGGTCT 276887 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 276947 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 277007 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 277067 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 277127 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 277187 29 96.6 31 ............................T TTTGTTTATACGGTTAATAAATCAGTACAAT 277247 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 277307 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 277367 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 277427 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 277487 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 277547 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 277607 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 277667 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 277727 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 277787 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 277847 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 277907 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 277966 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 278026 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 278086 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 278146 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 278206 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 278266 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 278326 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 278386 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 278446 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 278506 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 278566 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 278626 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 278705 29 89.7 31 ....G........C...........G... CCAGTTTGCTGAAAATCACCAATACGGTCTT 278765 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 278825 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 278885 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 278945 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 279005 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 279065 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 91 29 95.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-77] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //