Array 1 62050-60983 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMUP01000019.1 Escherichia coli strain WW10 NODE_19_length_70938_cov_25.7682, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 62049 29 100.0 32 ............................. TTTCAGAAAAGTACGGCTCAATTGATCGCCCC 61988 29 100.0 32 ............................. CGCTGGTGGCGGAAAACAGCCAAAATAACGCA 61927 29 100.0 33 ............................. TGGATTAATCCGCGGCTGGCGATATCTCGCAGC 61865 29 100.0 32 ............................. CCTTGATCGGATTCCAGAAACGAACCACTAAA 61804 29 100.0 32 ............................. TCGTTTAGTGTGGAATTTGGCGACGCGGAGCG 61743 29 100.0 32 ............................. TTTAGCTAATATTGGGCGGCTAACGTCATCAA 61682 29 100.0 32 ............................. GTTAAATATTGTTCACCATCATGGATCAGGAA 61621 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 61560 29 100.0 32 ............................. AATTAAATGATTTTGATGCGCGCCGACTTGAA 61499 29 100.0 32 ............................. CCACGCGGCTGCATTCAGTGATATCCAGTTTG 61438 29 100.0 32 ............................. CATCTATTTATCTCGCCGCGATTGGCGATAAC 61377 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 61316 29 100.0 32 ............................. GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC 61255 29 100.0 32 ............................. GGATGACCTGTCGCTAAAACTCGCCGCGTACA 61194 29 100.0 32 ............................. TCCGTTTGGTCCACCAAATGTTTGATGCTTCA 61133 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 61072 29 96.6 32 .A........................... GGCGCACTGGATGCGATGATGGATATCACTTA 61011 28 72.4 0 .AA........C..T....T-.G.....C | C [60986] ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : AGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //