Array 1 92545-92818 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFBO01000012.1 Klebsiella pneumoniae strain 4300STDY6636961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 92545 29 96.6 32 ..T.......................... TATGCAACGCTGTGCACTCAACGGAGGAGGTA 92606 29 100.0 32 ............................. GGAGGCTCGTAATCTGTTGCAAACTTCTTTAG 92667 29 100.0 32 ............................. AGCTGCATAGTTATATCCTGTGTTATTAACTA 92728 29 93.1 32 ...........AA................ CGCAATCCGGGACGCAACGGCGGGTATTTCTG 92789 29 86.2 0 ............A...G.......C.G.. | G [92812] ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Left flank : GGGGGGCGGCGATCAGGTTTTTACTCAAAATGGGTTTTACGGTCGGCCTTGTAGGGTATCCCGCTGTAGGTAAGTCATACCTGCTCGCCCGGACATTGCCAGAAGGTTTTATTGACGGTCGAGAACTGGTGGCGAAGAACAACTGGGAAACGCCGGTGCCATTCCCTTCCGACAAGATCCCGTCCGGGCCTGTAGGCATTGATGAAGGAAATGTGTTCGGGAATGAAGCTTTGTTATCGGCAGCGGCGTCCCTGAAAAAATGCGGCGTTGTGTTTACTGCTCAACGTCTGAAAAATGCAGAGAGCCTCGCGGCAAGTTTAATGGCGCGGCGTGTGCTGATTTTTTATATCGGTGAGTATGAGTATTTTAAGTTTGAAGTTGCGGCACACTATGATCGGCGCAGGAAATCCTGAACCTGCGGAGGTGGTTTTTACGCCTCAGAATCTGGTGGAAAATGAATGAATAGAATTTGCATTTGTAATCAATAGTATATAGTTAGA # Right flank : GCTATATCGAACGCGTTACTGGGAAGTGATTTTCAGAAGAAAACATTCGCTCGCAAAATACCTATAGCTAAAACCGGTTCGCCGGTTTTTTTTTGTGCCTGCGGTATTCGGCATATCTTTTGCGGGAAGGATAATAGATCCCTGCGAAACCATTTGGATAAGGTGACAATAATGGCTCAGGTTCAGAGAGGTAAAACGGTTCCCGTTCGGCCATCAGCGACGTATTTCAGCTATAGCCCCGACGACGGGTATGAGGAGCATGACTCCCCGGAGAAGGCAAAAGCAGCGGCAGACGCTGCAATTGATGCTTATCGGGGTGAAGCATGTGATGGCTGGCCTGATGAAGTGACCGGCGTTACGTGGGGTGTGGTGGCACAACGAGCGGCAAAGTTTGGCGAGCGTAAGCGCACCAATGAAGACGCGCATCTTTCTCCAGAAATTCAAACGGTCTGTGACTACTATCTTGCGCCGGAAGTGACCGTACCAGCCTCACTCCCCTT # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 216760-213623 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFBO01000002.1 Klebsiella pneumoniae strain 4300STDY6636961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 216759 29 100.0 32 ............................. ACAGAAACCAGCAGCGCTATAACCTTGAGGGG 216698 29 100.0 32 ............................. CTCATAGGTATAGGCTGAGTTAACTGAACCGG 216637 29 100.0 32 ............................. GCTCGCAAGTTACATCGCTGCTGTGAGTGTCA 216576 29 100.0 32 ............................. GTTTCGCACTCGCCGTTCTGACTGCTGCGCCA 216515 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 216454 29 100.0 32 ............................. TCATAGCCGCCGCCCATGCAACGCGCTATCAG 216393 29 100.0 32 ............................. CTGGCGATCATTAACGAGCCGCTGGGTAAAGA 216332 29 100.0 32 ............................. CCGCTAAAAGTACCTGTTGTCCCACCAATACC 216271 29 100.0 32 ............................. CCCGCGGGGATCTGATGATCCTGGGCGGAAAC 216210 29 100.0 32 ............................. GTGTGAGAGCAACCACAGCAATGACGAAGAGT 216149 29 100.0 32 ............................. AGCGCCGCTGGTGATTCTGGCGAAGAGGACTT 216088 29 100.0 32 ............................. GGTTTAACCGACATTCTCTCGCCCGCAGTAAT 216027 29 100.0 32 ............................. AAACGATAAGGCGTCGGTTACGTGAGTTTTGA 215966 29 100.0 32 ............................. CGCCGATCGTGTTCAGTAGCAACGGGTATGCC 215905 29 96.6 32 ............................T TCGCTGTATTCACTCACCAGCTGGCTGCGCGG 215844 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 215783 29 100.0 32 ............................. GCTCAAATCACAGACGAACGTTTGGCAAAAAT 215722 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCATGTGGG 215661 29 100.0 32 ............................. TTTTACATCTCCCCCAGGAGACCTTGGGGGAA 215600 29 100.0 32 ............................. GCGAGCTAATGCCATACCGCTGTTGTAACGAT 215539 29 100.0 32 ............................. GACCAGAAAGCGTGGGCGCTTTTCCGCTCGTT 215478 29 100.0 32 ............................. CCCGCCGGGATGGATTTAACCCCGCTCTTTTC 215417 29 96.6 32 ............................A CACTGGCAACCCACACAGAGCGGGTGCCTCCC 215356 29 100.0 32 ............................. GCTGATTTAATTGAGTCGTGGACGCCCCCTGA 215295 29 100.0 32 ............................. TTGGCGGCCTGCCGGCGGTTTACGCGGCGGGC 215234 29 100.0 32 ............................. GTGTATAGCGAAGTGAAGCAAAAAATGGTTAA 215173 29 100.0 32 ............................. CAATCGTAATTTCCAGTCAAGGCGGCTTTACG 215112 29 100.0 32 ............................. CGGGGATCGAGGATTTCCGTTTTCACGACCTC 215051 29 100.0 32 ............................. GCTACGGTCAGCGCAGGTGATGGCTACCCAGT 214990 29 100.0 32 ............................. TGGAGTCTGGTGCATTTGACGGCGCGGTATTA 214929 29 100.0 32 ............................. ATCTTCGTCATTGCGATACATACTCACTGCCT 214868 29 100.0 32 ............................. CCAGCGGATATGCTCCACGACATGATCAGCGC 214807 29 100.0 32 ............................. TAAAATCGATACTTCATTCGCTGCCAATAAGC 214746 29 100.0 32 ............................. CGTCGCTGAATCTCCCAGCCCCAGGTTCGCGC 214685 29 100.0 32 ............................. CCATCAATTTCCGACGTTTTATAACGTCCCTG 214624 29 100.0 32 ............................. ACCAGATAGAGATCCACATTGAGATTAACCCG 214563 29 96.6 32 ............................A CGCGGAACCGTAATTCATGCATAAAATTTTTC 214502 29 100.0 32 ............................. GGAATGGGAGACTGGCGTTTCATGATTAGTGA 214441 29 100.0 32 ............................. CGCCCACGCTTTCTGGTCCATCACAGCGATAT 214380 29 100.0 32 ............................. TTGCGCTCGGCGGCGCTGTTTCAACCGCCAGA 214319 29 100.0 32 ............................. GCGGCGGGTTTATGGGGAAAGACTGGGACAGT 214258 29 100.0 32 ............................. AACTCTGGCCCCTGGCGCGGCGCCAGGATATC 214197 29 100.0 32 ............................. CAGCCAGCCATCTGCCGTTGAGTCGATGCTGG 214136 29 100.0 32 ............................. GGCAGTCCAGTTATGGTTCGGGTCCGCTGTGG 214075 29 100.0 32 ............................. GGGCTCAAGGCCGTTATTTTCTACGTGTTGAA 214014 29 100.0 32 ............................. GATGCCAAAAAACTGTTTGCGTTTGCGTGGGC 213953 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 213892 29 100.0 32 ............................. CCCCCCACTCGGTACGCATCATGATATTGAGC 213831 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 213770 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 213709 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 213651 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 52 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCTGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //