Array 1 1686406-1684844 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010277.2 Flavobacterium psychrophilum strain VQ50 genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1686405 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [1686401] 1686329 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 1686253 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 1686177 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 1686101 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 1686025 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 1685949 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 1685873 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 1685798 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1685722 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1685646 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1685570 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1685494 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1685419 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1685343 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1685267 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1685192 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1685116 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1685041 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1684965 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTRAGC 1684889 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 21 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //