Array 1 271201-269778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWZG010000002.1 Finegoldia magna strain FDAARGOS_1521 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 271200 36 100.0 30 .................................... CTTCAAGTTTGTTTGTGCCATCTCTAAGCA 271134 36 100.0 30 .................................... ACTATAAGTAACCAAATATCTCCATACGCT 271068 36 100.0 30 .................................... CTTCTTTGCCATCAAACACTCCTTTACGTG 271002 36 100.0 30 .................................... TTTCTTTGAAGTAATACTCAATAGTGTAAC 270936 36 100.0 30 .................................... TCAAATCCACAAATATCACCATAGCTTGAT 270870 36 100.0 30 .................................... TATCAGCCTGTGTCGGAACGTAAGGGCTTC 270804 36 100.0 30 .................................... TGAATATCCCGCTTGTTTCCTCGTCAGTGT 270738 36 100.0 30 .................................... ATTTGGGGATATATGAGTAATGAAGAACTT 270672 36 100.0 30 .................................... AAAAGCTTTATCATCATAAACATACGCATT 270606 36 100.0 30 .................................... ACTACGACGAATTGAATGCGAGAGGAGTTG 270540 36 100.0 30 .................................... TGTTGTTTCTTTCTCCGCAGCGATTCGATA 270474 36 100.0 30 .................................... AGTTGTGGACAGTTTAGACTTTGCAGGTGT 270408 36 100.0 30 .................................... TAAAACCTCTATTCTATACTCTTAATTATA 270342 36 100.0 30 .................................... TTTTTCAGCTCCACTTATTCTGATTTCGGA 270276 36 100.0 31 .................................... TAACTCAGATGAGTTTTTAAGAGATGTAACA 270209 36 100.0 30 .................................... TTTTTTATTGCTTCATATCGTTTAATGGTA 270143 36 100.0 30 .................................... TTAATTTTAGTATTTCCTAATACAACAACA 270077 36 100.0 30 .................................... TGTTACGTTTAGTAGAAACAATATGCCGCC 270011 36 100.0 30 .................................... AACTCAGATGAGTTTTTAAGAGATGTAACA 269945 36 100.0 31 .................................... TAAAGGGTATGTGTGTAAACTAGAAGTTACT 269878 35 97.2 30 ...................-................ TAAAAGGAGAATTAAATGGTAATTACGTTA 269813 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.7 30 GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC # Left flank : ACAAGAAAATCACAACAAAAATTATAAAAGATTTAATGGAAATTATCTCAGATGAAAAGCATTACGAACAAAAAATAAATTTAAACTCATCAATTATTAATTTTATTAACGACATTACACTAGATTATCCGTATATGCTAGAAATTGGTGATGAAATAAATTTTGAATCTTTATTAAAAGTAGTTCCAATAAAACCAAGTGTAGACTACACAGACTTCCTGGATAAATTTGTTTCTTATTTAGACGTATACCAAAATGTTTTGAAGATAGATGTATTCTACACAATAAATTTATTGCAGTATTTTACAGAAAAAGAGCTCAAAGAATTATCGGATTACATTAAAATTAAGAACATTTGCATAATAAATTATGATAATATATTAGTAGATAGCAATATCATTTCCAAAAAATTGCTGTTCGATAATGATTTATGCAGAGTTTTATAAGTATCTATGTGAAATTACCGCTTTGATGGAGTGATTCTACCTCATGGATTTGAG # Right flank : AGAAATTTAGGAAAATAATTTATTGGAATTATTCGTGAAATCAACAAGATCAGGGGTAAAGAAAGATGTTTTAATCATAATATATGAATTAAAAGAAGAAAAGAAAGAACTCATAGGCTAATAACAAGAGACACAATCTTAGAAGTTGATATAAAAAATCATTTAACAATATTTATGATATAATTATAGCGATTAAGACGTCAAAGAGGTGCTTTGCATGAATAACAAAAACAACATAGATAGAGTTCATGATGATGTTTTTAATAGCATCAAAATATTGATGGATAAGGCAAGAAATGAAGTTGCAAGAGAAGTCAATAATATTTTGGTGCAAACTTACTGGGAGATTGGACGCATTATCGTAGAAGATGAGCAAGGTCATTCAGAAAGAGCAGAGTATGGTAAAGAGCTTATAAATGACTTATCAAGCCAACTTACAAAGGAGTATGGTAAAGGATTTTCTAAGTCTAATTTATTTAATATGAGAAATCTATATTTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //