Array 1 1626711-1627534 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOCG01000001.1 Hydrogenoanaerobacterium saccharovorans strain CGMCC 1.5070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1626711 32 100.0 35 ................................ ATCGAACGGTGGCGTAGGTGGTTTAGGTCAAGTTG 1626778 32 100.0 33 ................................ GCTGTAACGTTAACATAAGTCCTAGTCAACTAT 1626843 32 100.0 34 ................................ ATTTCATTTGTAAATGTCAATAGCTATAATTTAA 1626909 32 100.0 34 ................................ ACAAGCAATAGCTCTATGATTGCCATCTGGTATG 1626975 32 100.0 34 ................................ TGCAAACCATATTGCTGTACGATGTGGCACCGTA 1627041 32 100.0 35 ................................ TATTTTTTAATTACATATAACCAACACAAAAATAG 1627108 32 100.0 33 ................................ CTGTGGATTCTTATCTAAAAAAGGCTGCTTTTG 1627173 32 90.6 33 ..........T.A.G................. GATTGAAAATATACACGCAGGTCGTCGCCGTTT 1627238 32 87.5 34 ............A.G.....C..........C TTCATAATATCACCTCAATAGGTATCATATCAAG 1627304 32 90.6 34 ............A.G................C AGATGATGACATAAGCATCAACCCAAGTATTATC 1627370 32 90.6 33 ............A.G................C AAATGGTAAATATTATCTATACCATACATACTA 1627435 32 93.8 36 ............A.G................. ATTGCTTGGGATAGCCACGACATCGTGGAACCGTTG 1627503 32 78.1 0 ..............G.........GCA..GTC | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 94.7 34 GTCGCACCCTACGCAGGTGCGTGGATTGAAAT # Left flank : TATACTTTCACTGTTTTCATTCGCGCGTCACTTATTTTTATTTATGTAGGTGCTTAAAATCTTTTACAATACATTTCAATGATTGAGTACTCGATGTCCGCCCCTCAGCCTCACTCAAAGTAGGTGGACAAGGTATGCGTTATACCGAATGTTGGGGTACAAAGTATATTTGTTTTTTTGCAGATAACAACCGTTGGTTTGATGCGGAAAGGATAGACAACGCAAAAATGCATCGCCTATCCTTTTGTAGAAATATGTGGAATTTTATTGTATAATAAAACTAGAACACATTAATGTAAAAACACAAAGGCGTACTGATTGTTTAAGCAAGCAAAAACAAGTGCGAACTAGAAGCAAACAGCTTTCTTCCGGAACGTTCGCACCCCAAAATAAGGAAGATTTATGCTTAATCAACATTATAGCTTTTGCTGCTTGCAGTTCCAAAGGCTAAATATAGTAAAACATTACAAAAATTCAATTGATTTTTGTTCGTTTTTGCT # Right flank : CAAAAAACCTCGAACACGCAAATTACGTGTTCGAGGGTCAAAGATGGTTGAGATATTAAAATTATACAATTACAATTATTTCAACATCATTTTAATGGAGGCTCTACGCAATGACAGAATACAACATAGCAGAATTAGTAAAAGAAAACTATGAATTAAAAGCTAGAATGAATGAGTTAAATGAAGTTATAGTTAAGTTGAATTTACAACTATATAATTCATCAAATGAGACTTATATTCCTGCAATTAATCAACGAACACTTTTTTGTGACTTTTATAAAAGTGGTTAACAGAGTATCATAAAAATTTTGTACAACCAACATCCTATCAAGAATATGAGCGTTTGATGAATAAACATATTTATCCATATTTTAAAAAAGAAAATGTTTATTTAGATGAACTCAAAGCAGATGATATACAAAGATACTATTATCGAAAGTCACTTGAAGGTATTACAAGTAATTCTTTGTTAAGACATCATTCCAACTTATACACATGCC # Questionable array : NO Score: 8.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCCTACACGGGTGCGTGGATTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1974474-1975698 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOCG01000001.1 Hydrogenoanaerobacterium saccharovorans strain CGMCC 1.5070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1974474 32 100.0 34 ................................ GTTTATACTTGCAGACTTAGCACCACTAAAGAAT 1974540 32 100.0 34 ................................ TACAGTAATGTTTTTTTCCTTGACTTCTGAAATG 1974606 32 100.0 33 ................................ TATCAGAACATGTATATGATAAAGAGCAAAATA 1974671 32 100.0 34 ................................ TATGTGTGTATTGTCGTATTTTTTGTGTTGTAAA 1974737 32 100.0 33 ................................ ACCCGCGGAGCTTAATATCTTTAATCTTGTATG 1974802 32 100.0 36 ................................ CGTTGAGGACATGCTAAACAAAGTTAAAGGCGATAA 1974870 32 100.0 34 ................................ TACATATCGTAACCGTTTCAGCTTGTTCCCTTAA 1974936 32 100.0 33 ................................ TGATAATCTTCATAGGCTGCTTTCGCACCCTGT 1975001 32 100.0 36 ................................ ACCCTCGTCATAAAGTAGCTGAATGAACTCAATGGT 1975069 32 100.0 33 ................................ TACCAAGTTTAGTTACAGTATAGCTTATCCTAC 1975134 32 100.0 36 ................................ AGTTGTACGGCAGCTTTCGTGCCGCATCAGTTCTCG 1975202 32 100.0 33 ................................ ATCGCAGGGGTTGCAGTATAGCTATGTTTTGGC 1975267 32 100.0 37 ................................ TTGACAGTGGCGTTCAAAGCCCCGAAGCGCAGAGCGC 1975336 32 100.0 34 ................................ CTTGCATTGTTTACAGTATGGCTTTATCTCTCCT 1975402 32 100.0 36 ................................ ATTGAATAGGATGGTTAAATCTATTGATTTTGACCG 1975470 32 100.0 33 ................................ GTGTCCAATAAATTAAAATGTTTTTTGCAATAC 1975535 32 100.0 34 ................................ AATATTGGCAAGCTTGATTTGCTTGTAGTGCTCG 1975601 32 96.9 34 .....................C.......... GTATTGATATTTGTTGGCATATGCTCCGCTTACG 1975667 32 90.6 0 .........................C.A...G | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 99.3 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : TGCGTATCCGCCATTTTTTTGGAAGTGAGGTTTACGCCATGCTGGTACTAATTACATATGATGTCAACACACAGGATGCTGCAGGAAGAAAACGGCTTAGGCAGGTAGCAAAACAATGTGTTAATTACGGTCAACGCGTTCAGAACTCTGTTTTTGAATGTATTGTAGATGCCGCACAATGTAAAATTGTACAACATGAACTGGAAGCCATAATCAATAAAGAAAAAGACAGTTTGCGGTTTTACTATTTGGGTAATAACTATCACACAAAAGTAGAACACATAGGTGTCAAAACATCTTATGATGCAGAAGGAGTGTTAATTGTATAGGCAAGAGGGAGTGCGAACTATAAGCAAACAGTTTTCTCCCGGAACGTTCGCACCCTAAAATAAGAGAATTTTATGCTTAATCATCATTGTAGGTTGTTGTAATATGTAGTTTTGATAGTGAAATATATCAAAACAGCACAATAAATTTATTGTTTTCTGTTTATTTTTGCC # Right flank : GCAAACGAACTGGCTCTGAAACAAAACTTATATCTTTCATCAGCACCCTATATTATCTTAATCCAGTTTAGTATATAATGTAAATAATGGACATCAATAAACAAATAGGGGGATTTTATGAAGACGGTATTGATAAGTGAATGCAGTGACTATAACATACCTCATACTGCGCTGCTTGACCTTTCGACTATCAAGGTAAAAGGCTGTACTGGCTGCTGGACTTGTTGGTGGAAAACACCCGGCAAATGTATTCAGCATGATTTGGATGATTTTTACCGAAGTTATCTTAACTCTGATAAAGCTATATTTATTGCAAAGCTTGAAAATGGATTTATCAGCGGCAACATGAAGTCGTTATTTGATAGAATGATACCACACTTTTTACCTTACTGCGCTTTTGCCAACGGCGGAACAATGCACATGCCCAGATATAAAAAATACCCCGATATTGAATTTTACTATGACTATCAATTTGAAAATCAAGATGTATACAACATATT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //