Array 1 13700-10996 **** Predicted by CRISPRDetect 2.4 *** >NC_019677.1 Nostoc sp. PCC 7524 plasmid pNOS7524.01, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 13699 37 100.0 34 ..................................... ACGGCAGTGGTGATGCTGAGAGCAATCGCCGTGT 13628 37 100.0 38 ..................................... TTTGTGGCTTTGGTTCTGGTTGTGCCTTTGGTGGTGCG 13553 37 100.0 33 ..................................... ATAGTGGGTTTGCAATATTTATAAACTCCCCTA 13483 37 100.0 34 ..................................... TTGGGATGATGTAGACCGGATTTATTTGACTACC 13412 37 100.0 36 ..................................... GGCATATGCGGCTAGTTCTGCATCGACTTGTTCTTG 13339 37 100.0 34 ..................................... GCTGGAGATCCTAATGCGATCGCCCAGGCTGTAC 13268 37 100.0 36 ..................................... GAAAAATTCTGCGAAGAAGTAGCAAAAGTATTGCTT 13195 37 100.0 35 ..................................... AGTATTCATATTTCTAATTGCTTCTATCCAAGTAT 13123 37 100.0 34 ..................................... AATTTATTTATAAAGATACTAGCTAGCTATCATA 13052 37 100.0 38 ..................................... TATAACCTATTAAATGTAGGGTTTTTCTACTGCTTTCG 12977 37 100.0 36 ..................................... CGAATGCTATAGTGAGTATACACCTTACTTTGGTAG 12904 37 100.0 33 ..................................... AAAGCTACCCTTTGCGCCGTTTTCCCCTGCTTT 12834 37 100.0 35 ..................................... TGTGGTGGGTAGTGGAAACTGAACTACCTAGTTTT 12762 37 100.0 33 ..................................... AGCTTATGCTTTGCAGATTATCAACCATGATTT 12692 37 100.0 33 ..................................... TTTATAGAGGCATCGTACTTTATCAATATCGTT 12622 37 100.0 37 ..................................... TGGCAAGACTGAACGGTACTCAAGAGGATGAAGTCTA 12548 37 100.0 37 ..................................... CAAGCTGATCGGCAACCCCAAAGATGGCTATAGCGGG 12474 37 100.0 36 ..................................... CAAGAGAAAGATATTCTTGATGGACACCTTATTGGT 12401 37 100.0 36 ..................................... GACCTTGCTACTGGCGATCGCTACTGGGAGAATGTA 12328 37 100.0 35 ..................................... TTAATGCTAGCTCTAGCCGCTACAGTTGCCCCCAT 12256 37 100.0 35 ..................................... AGGGCTGCTTTTATCGATGCCTTGAGCCTTGACTG 12184 37 100.0 39 ..................................... GACATACTAGGTTAACCATGTGATAATACTTAAGGGGGA 12108 37 100.0 32 ..................................... CAAACTAATAAGCTTGATGAGAACGATGAAAA 12039 37 100.0 35 ..................................... ATATTGTGACACGTATGATTCTTCATCGCTGCCAA 11967 37 100.0 35 ..................................... GAGAGATTGTTTTAAAGCATGAAGAAACTCACGAG 11895 37 100.0 32 ..................................... AGCTCAAGGGCAAATCACCTGGAATGAGCTTA 11826 37 100.0 34 ..................................... GACTTACAGAGGGCAGAAATACTTGCTGATACTG 11755 37 100.0 36 ..................................... GTGGTGCATAATCCCACCGGGCATCACAGTTATGGA 11682 37 100.0 36 ..................................... AACAAGTCGGCGTGCGCTGCAAGTAATCTCTCCTCA 11609 37 100.0 34 ..................................... CCTATCAGCAAGCAATTGGGCTAGGTGCGCGAGC 11538 37 100.0 34 ..................................... GACTTACAGAGGGCAGAAATACTTGCTGATACTG 11467 37 100.0 33 ..................................... CAAGAGTACAAGTTTCATACTTAACCTCTAATT 11397 37 100.0 34 ..................................... GTCAAACAACAGATGATTGCTGCATACACTGAGG 11326 37 100.0 34 ..................................... AATATCATCTGATCAGCTTGAGACTGAGTTTGTC 11255 37 100.0 37 ..................................... ATAGCCAGGATCTCGGTATGCACTATATTCGCCTTCT 11181 37 100.0 37 ..................................... GTAACTATCCGTGAACCACGCAGAATCAGCGCATAAC 11107 37 100.0 36 ..................................... TTTACTCGCATAGACATAACACAAAGGTATAGACGA 11034 37 86.5 0 ...............................C.CGCT | C,A [11001,11003] ========== ====== ====== ====== ===================================== ======================================= ================== 38 37 99.6 35 ATTGCAATTAACCTTAATCCCTATTAGGGATTGAAAC # Left flank : CTCGCAGTTCTCAAAAAAAACGTCTTGACAGTAAAACTAAGCGAGGACAAATTAAGTCAATGAGAAGGCAGATAGTTGATTAAAGTATGATCCTCTTAAACCAAAAACCCAGCCGGGTTGACTGGGCTTTTGTTGGGGTTATATTCCCTCCTAGGTAATTTATAGAAGTTATTGATAAGTCGCTTTAGTAATAAGAACTACCACGCCTAGATTGCCAATTCCAGAAAATTAGAACCTTTGTTAGAGTTGAGATACACAATATTTTTTGGCTGAATGCGCGGATGGGTAGGTGTAGAAATTCTCTCTTTTGGACAAATGGCTGTATTCCTTGTAGGACGGTCTTTTGCAGAAAAATTAAATTAAAATCATCCGCGCACCTTACCCAGTCTAGGTTTCAAGAATTTCATGTAAATCGACTGACATTTTCGCGTGTTATAATCAACCCATCCGCGCAACTGAACCTTGAAAATCAAATACAGATTAGCTTTCAGCCTGCCGCG # Right flank : TCGTGTGTTTATCCTGATAAGTGCGATCGCGCTAAAAAACGGATAGTGCATCAAACATCTTGACTGTCGTATGTAGTGAGTGAGGGAATTAAACCCCAAAACATACACTCAATACCATTCACGAAAAAATGAAGAACAGCAAAAAAAACATCAACAATCAAGAGTCCAGACTGTCTCAATTGAGTCCAGAGTCCAAACTTCTCCCAGCAGAATTGGCAATAATTGCAGCAGGGACTGAGGTCAAACCACCCACAACGGTGATTATTCGGAGTCGTTTGTGACAAGGGTGAGCGCACCCCCTCAGCTTCCCTTACCTATCCACTCACGCCCCATCTTTTCTGCGGCTTCAGGCGTATAGTAAAGTTTGCGCTCACCAAACACTGCACCACTGGGACTAATCAACCGGAACTGCCAACAATTGGCCTGTGAATATACCAACAGAGTAGCGTGGTGAATGCCAACAATTAAATGAATTTTGGTGGTTGTCATTAGTGGCAGGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACCTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 32405-27800 **** Predicted by CRISPRDetect 2.4 *** >NC_019677.1 Nostoc sp. PCC 7524 plasmid pNOS7524.01, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 32404 36 100.0 54 .................................... AGCTAAATTTGTGCGCCAAATCATTGAGCGGGAACACGAATCTCCGTCATTCAA 32314 36 100.0 38 .................................... GCCACTTTTGGGCGAAGTATCAGCACCACCGCATGGTT 32240 36 100.0 38 .................................... AAACAAGTAACAAAAGTAGAATTGTTAGAACGTCAAAA 32166 36 100.0 39 .................................... CAGCTAGGCAGAGAACTCTCCTAGCTGATCTAAGTAAAA 32091 36 100.0 37 .................................... AAGGATGATGGCATGACCCAAAGCCACCTGGTCATTG 32018 36 100.0 39 .................................... CATAAAATGCTTCTGGCTTGTGCTACAGGGCATGATAAA 31943 36 100.0 41 .................................... TTAAGTTAAGCATAGGAAAGTTGTAGTCTATCTCCCAACAT 31866 36 100.0 41 .................................... TCTAATCTAGGAGTTTGTCATGTTTAACTTCACTGAAGAAA 31789 36 100.0 37 .................................... ATTGACGATAACGGACGAGACGAGCAAGGCAACCAGT 31716 36 100.0 37 .................................... TTGGTTCGTGGTATGTTCCCGACACTTTAGTTGATGA 31643 36 100.0 39 .................................... CTGGATGAAGCTTAGGATGATGCGATCGCCCTTCCTCCA 31568 36 100.0 41 .................................... CAGCTTTGCATGAGTTTTTGTATGTTAGTTATTAATGCGAT 31491 36 100.0 40 .................................... TTTATCAACAAGTTCAAGGGGCGCAAAACAAATGTTATGG 31415 36 100.0 35 .................................... ATGATGCCATTATTGATGCCTTAGATAACCATCTA 31344 36 100.0 40 .................................... GATTTGTACTCGCGATCTAAACCTTGAAAACTTAATACCA 31268 36 100.0 34 .................................... AGGAATTATATGCTAAAAGTTCAAATCTTTGTCG 31198 36 100.0 36 .................................... GGTAGAAAAAATAAAGATGGAGGTTTTAAGTAGAGA 31126 36 100.0 37 .................................... TGTAGTGCTGCTTGATCCGAGAAACAGAATAGCCCCT 31053 36 100.0 36 .................................... AGAGTTAACCATTTGGTTAGCGGCACTGAGAGAACG 30981 36 100.0 38 .................................... TAGAACTTATTGACCAGGGTGAATTTGTTAGTGATTTG 30907 36 100.0 36 .................................... TATACACTCGATTCGACAAAAAGAATCAGCCGATGT 30835 36 100.0 37 .................................... GTAACACTGGTAGATAGATTCTAGTATCACAGATTCT 30762 36 100.0 37 .................................... TAAAGTCCTTCTCCCGTGGTGCGTGTATCCTCTGTAC 30689 36 100.0 37 .................................... GGCCAGCGATAACCTTTAATCTCAGGAGAATAGTAAA 30616 36 100.0 38 .................................... GCTCTGTATCTTATAGCTCATAGGTTTTTTCCTTTGAG 30542 36 100.0 36 .................................... TTTCTAGGCGACGGTAATCCCATGTTTTCCGGTCAA 30470 36 100.0 34 .................................... CCCCGTATTGCATTCCGTCAATGACAAACTCTAA 30400 36 100.0 38 .................................... CAGAAAGAGAGGTAAAACAGTGGCTATCTAGTGACATT 30326 36 100.0 37 .................................... AGAACAATTAGAAATTCCTTTCTTCATTAATACTGAA 30253 36 100.0 37 .................................... ATATCGTTAAAGCAACTGTTGATGATTGGGTAACGGC 30180 36 100.0 40 .................................... CTCAGTATGTTACTTTAATTCTTTTTATGGTTGTTTTGTT 30104 36 100.0 37 .................................... CTGAATTAACCATTACTTATTCATTTATTTCTAATAA 30031 36 100.0 36 .................................... ATTTTAAAAGGAGAAAGCTCTATGGATATTTATGAT 29959 36 100.0 42 .................................... TTATCAAAATCAAATTAGAGAAAAAACAATGAAAACATCAAT 29881 36 100.0 35 .................................... GGGGCTATTAGGATAGGCTCTTTGCGCCCATTTGC 29810 36 100.0 35 .................................... CTGCTGCCACACATCATAAGGAGTAGTGCCAGGAG 29739 36 100.0 37 .................................... CGATCGTGATGAGCTAGACGGTAGCAGCCTTGAGCTA 29666 36 100.0 36 .................................... GTATGGCAAACAAAGCCCCCGGTCTTAGTTCTGAAT 29594 36 100.0 39 .................................... CGGGTATACCTTTAGTAAAGATGGGATACCCTTGAAACC 29519 36 100.0 38 .................................... TATCTTAACTATCCTTGAGGAGTTTATGGAATGATAGA 29445 36 100.0 38 .................................... GCTCTAGGCAACCTCCAGGCACAGCTAGACAAGATTGA 29371 36 100.0 41 .................................... GTGTACGGCGTGCAGCACAAAAGTGAAACAATTATTTTGGA 29294 36 100.0 42 .................................... GTCGGGGTGAATTGCTCTATCCATACTTTTACCCCTCATTTT 29216 36 100.0 33 .................................... CCGATGATCAAAAAGTTGAGCAAATGCAGTTAA 29147 36 100.0 37 .................................... GCAAAGTTTGCATGAGCGACTTATTTCTAGAAGTAAC 29074 36 100.0 36 .................................... TCGCCAACGTTTAGCGGCTTTGGTTGGCGATTCTAG 29002 36 100.0 37 .................................... ATCGCACCTCTAAGATAAAAGATATGCGAGTAACTGC 28929 36 100.0 40 .................................... AAAGAATTTATTGATGGTAATAAGGAAGAAGGGTATTCAT 28853 36 100.0 38 .................................... GCGTGAACGCATTCATTACTACCCGCACGAGGAACAAA 28779 36 100.0 36 .................................... ATTTGATCCTGTAACAACCGAGATTACTTTCCCTGA 28707 36 100.0 37 .................................... TTTTAAATCCTGCTGGAACACATACTGTAATTGAACT 28634 36 100.0 40 .................................... TTTGCTCAATGATCCAACCTTCCAAGATGCTGACAGGATG 28558 36 100.0 38 .................................... AAAAATATGCGATCGCCTATCACTTTGATTTGATTAAC 28484 36 100.0 37 .................................... TTGACAACACTAAATCAAATTTACGCGCAAACATCAG 28411 36 100.0 35 .................................... TGTTAGTTGCATAGCCATCTACTTAACTCTCTTTC 28340 36 100.0 36 .................................... TTGTATATGGCAATGAACCTTATACAGACTTAAGGA 28268 36 100.0 35 .................................... TTGGCTAACCACTCGGCAACATCTAGGGATATTTG 28197 36 100.0 35 .................................... CAGTTAGATAAAGGAGTCAGGGATAACATTGTAAA 28126 36 100.0 37 .................................... GCAATGGCTGCTAAAAACCTCCTGACTGGAGAAGCAG 28053 36 100.0 37 .................................... TTGAAATCCATCAAGGTAAAATCCTGTTGATAGGAAA 27980 36 100.0 36 .................................... TCTTCTATTGTCCAAGAATTCTCTTGTAAGTTATCT 27908 36 100.0 37 .................................... AATCATCGTTTTTACCTTATCGACCTGAAGGTATTTT 27835 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================================== ================== 63 36 100.0 38 GTTTCCATTCAATTAATATCCCCAGCGAGTGGGAAT # Left flank : CTGCTATTAGCAAGTGTTGACACAAAAAGCTTTGTGATGACCCCGGTATTCTGCCAGCTTCAATCCAAGGCTGCATTACTTGTAATTGTTCAAAAAAGCTGTTTCGTCCCCGTCCACTATTATTGTGTAGTGCTTTTAACATCGGGTCATGAAGTAAACCCCAGATTTTAGCCCGCCAATATTCTTCTGACACCAGTAATTTCCTTATGTAGCTGATATGTGCATTGTATTAAGGGATTTCAGTATTTGTCTAGGAATATAAAATATCTCAACATTTGCCAAAATCATCCTGAAATCATTGATTTGTAAGCTTTACCTCTTTATATGAGTTCTATCACAAATATTTTCTTATGTTTGACATCAGTTATTATTTATGAATTGACCAAACTATAGGTTTTCCTTGTTCATCTGTGATAGTTCATGTGTATTTCTTTGATTTTGTAAGTATGTTTTTATACTTCAAAAGTATATACTCCTTTTTAGGAGTCATATCTAAAAGC # Right flank : CCCTAGATTTTAAATCATTACTCCGTAAGAAATCCAGAGACGGTTTCCGAAGGTCAGGAAAAACCACCGCCAAACAGCCCACAAAGCAACCATTTAAAACCCCGTAACCTTTATCCAACAAGCTACCGAAGGTCACAACCAAAAAATCAATACTCCAGCTACTTCACCCAAACCTCGGAAACAGCTAGATAATAATTGAACTAGGTGGTTCAATCACGGGTATTCCTACACCCCAAGTTTCCACCTGAGACAGAGTATGCCTAGATAACGGATAAAACCTTACGTTATCCTCTTCTAACTTCAGTTGTTTTCTTAACCGACGACGCAAATCTTGATACTTTTCTGTATTTAACTGACATTCAAACACGGAATACTGCACACGCTGTCCATACCCTTCTAATAAGTCAGCCACCTTTTTACGACGTTTATCACAAGGAATATCGTAGGAAATTACATACAAAAACATAGTAAAATTTAATCAATTTTGTAAGGCTGATAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATATCCCCAGCGAGTGGGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 999315-996949 **** Predicted by CRISPRDetect 2.4 *** >NC_019684.1 Nostoc sp. PCC 7524, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 999314 37 100.0 41 ..................................... TTGTATGGGTAGTGTGAAAGTATAGCCAGAAGGTGTTTCAG 999236 37 100.0 36 ..................................... ACGGGATTTAGCCATGATCTGATTAGGATGATGATC 999163 37 100.0 37 ..................................... TAGGTGTGGGTAGCGATCGCCCTATTGCATCAGTAAA 999089 37 100.0 37 ..................................... AAGATTTTTAGCTAACAATTTGACCGCAAAAGATAAC 999015 37 100.0 34 ..................................... TTTAGTACCTTTGTTAACCCCGTGAGAATTACAC 998944 37 100.0 35 ..................................... GAAATTTTTCAACCGTTGACAGGGAAAAACCCCAA 998872 37 100.0 39 ..................................... AGCAATATTTTTTCTAGTCTTAATAATATTATTAGTATT 998796 37 100.0 35 ..................................... TAGAATCTATTACAATTTCTGACAGTTCCGATTTT 998724 37 100.0 40 ..................................... ACTTTTCCCTCCAGCAGTACCAACCCCATCGGGGGTTTCA 998647 37 100.0 36 ..................................... ATCACTTCTATGGTTGTCACCCCTAGCTAATCCCTA 998574 37 100.0 34 ..................................... AAAAAATCATTGTCATTACCAATAATTCCCTCAC 998503 37 100.0 34 ..................................... GAGAGCTTGAACTTTTACACAACTTTGACACTCC 998432 37 100.0 35 ..................................... AATAAAATTGCTCAATATGCCCGTTTTATGGGCTA 998360 37 100.0 33 ..................................... TAATTTAGAGCGATCGCACTCAGGCGATCGCTT 998290 37 100.0 39 ..................................... CTGGGGTCTGGCCTGCCTTGCGTCGTGTTTTTGGGTTCG 998214 37 100.0 40 ..................................... ATTTTTGTACCCTTGAGCGATCGCATAACTGCTCACCCTT 998137 37 100.0 32 ..................................... GGCTAAAACAGAGATAATTGCTTAGGTTGGGT 998068 37 100.0 34 ..................................... AATAAAATCGTCCACTCCTTTCCCCTCTTTTTCA 997997 37 100.0 36 ..................................... GTAACGAAAGGTACTTGACTGGAATTTGATTTTTTC 997924 37 100.0 32 ..................................... TCAATGGCAGACACCATTACTTTACCTTTGGC 997855 37 100.0 35 ..................................... TTGCTGTACAAACTCTGCCTAGCTGCGTAAATGGC 997783 37 100.0 40 ..................................... AATTCCTATTAGGGAAGCAAACAAATCAGCATCAGGTAAA 997706 37 100.0 35 ..................................... TTGTAGAGGCACTCATGCAGATGTAGTATGCGGTA 997634 37 100.0 35 ..................................... GTAAACACGGGCAGCTTGAGCAACAGCAGTAAATA 997562 37 100.0 34 ..................................... CAGTAGTGGACAGATGAGGGCTGAGATGCTGATT 997491 37 100.0 34 ..................................... GATGAAAAATACCGAATTGACCCCAAAGTTAATG 997420 37 100.0 37 ..................................... TTAATTAATGGCTAGTTTTATCTCAGACGAGTATAGG 997346 37 100.0 34 ..................................... GAGATATTGCCAGCAGTTGAAACGAAGTAAGAAG 997275 37 100.0 33 ..................................... TTTAAATTATGGATGGCTTGACGAAAGGTGGTA 997205 37 100.0 35 ..................................... TCATACTGTACTGAACTTTAGTAGTATATAATGTT 997133 37 100.0 37 ..................................... TGAGCGTAAATCCCGATGTCCACCATACGATGTTTGC 997059 37 100.0 37 ..................................... TAAGGTGATAGTTCCTTCCACGGGAACCCACACGGAA 996985 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 33 37 100.0 36 ATTGCAATTTCACTTAATCCCTATTAGGGATTGAAAC # Left flank : AAACCCGGTGGTAGAGTGGTGCTGGTGGAATACCGGGGTGAAAATCCCTTCATTATGATTAAGCGGTTGCACAAAATGACGCAAAAGCAAGTCCGTCAGGAAATGCAAGCTGTTGGTTTAGTGTGGAAAGAAACTAAGAACCTTTTACCGCAGCAACATCTCATGATATTTGAAAAGGAACTGGGGACTGGGGACTGGGGATTGGAAAGTAGCAATTCTCCCTCATCTTCTTCATCTTCCCACTCCTAGCCTAACTAAAACTCGGTATATGGAATGCGCGGATGGGTAGGTGTAGAAAATCGCTCTTGAGGAGAAACGGCTGTATTCCTTCTCACACAAGCTTTTGCAGTTAAATTAAATTAAAGCTATCCGCGCACCTTACACAGCAGGGGTTTTAGTTATTTTTGTTAAATCAACTGATGTGTCACCATGTTATAATCTACCCATCCGCGAAACTGAACCTTGAAAATCAAATACAGATTAGCTTTCAGGCGATCGCG # Right flank : GTAGAAGAACTCGCCGACAAATTTATCGGCAATTTAGAGGATATTTGAAAAGTCCCTAATGGTGTCTCCAATACTTTTAGATCCCCCTAAATCCCCCTTAAAAAGGGGGACTTTGATTCAGTTTTCCCCCCTTTTTAAGGGGGGTAGGGGGGATCAATAAGTCTCTAAAATCGCAGTTAACCCCTTTTCAAACAACCTCTAAGACACCCTACTAACTGAATAAATCACCCCTTAACTCAACTGAGCGACGAGTTGATTTTCTAACAGCGTTTCATTAGTAAATAAATCCTCAACAGAGATTCTTAAAAACCGTTGTTCATCAACTTGAAACTGAATTTTAATCCGATCGCTTCCCGGAAAGCCTGGGGGTGTGAGTTGGGCGATGGTTCTAGCGCCTTCTTGATCATTTAAAGGTTTAACGCTGGTGACACCACTATCTAGGCGGCGAGTAATTAAGCGATCGCCATCAAAATACACCTCTGTACCACCTGTTTCCGCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 2 1076786-1073074 **** Predicted by CRISPRDetect 2.4 *** >NC_019684.1 Nostoc sp. PCC 7524, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1076785 37 100.0 37 ..................................... TGAAATCCAGCACATCTGGCTTTTAATTGCGCGTGAG 1076711 37 100.0 34 ..................................... ATTGACAAAGTTAGACATAATCAGGCTGTGAGGA 1076640 37 100.0 38 ..................................... TTAGAAGGATATATCACCAATTTAGGAACTTCCTTAAA 1076565 37 100.0 35 ..................................... TTGGGAAGTCGAATTGACGATCTGCAACGATACTT 1076493 37 100.0 36 ..................................... ATATCCTTACCTGCACTGGCTAATTTTTTAGCTGCT 1076420 37 100.0 37 ..................................... CTATTGGAGGGGGGAAAGGACTGGAGGGGAGAGGAGA 1076346 37 100.0 42 ..................................... TCCTTAACCGCGATCGCGTGTCACTCCTGGAAAACCACCAAA 1076267 37 100.0 35 ..................................... ATCAGGAATACCGGGTCTAAGCCTGTAGTTAATTA 1076195 37 100.0 36 ..................................... AATACCTGTTCTAATTCATCAGAATCAGTAATTAGT 1076122 37 100.0 34 ..................................... TCATTACTCTATAACTCCTCTATCTCTCTGTAAT 1076051 37 100.0 37 ..................................... TTTGTAGGCCAGCCCAGAGGCTCGAACTGTTTGTGTT 1075977 37 100.0 35 ..................................... AACTGAAGTTGAATATGCTCGTTGTGCCAAGTATT 1075905 37 100.0 34 ..................................... CCTTTTAAATTGCCCGGAGATGTCTGGATTCATC 1075834 37 100.0 35 ..................................... TTGATGTTGGCGACTGTAATAAGTTCTCGCGTTTT 1075762 37 100.0 38 ..................................... ACGGGATATTTTGCCCCCTCTATTAAGTAAGGACTGGG 1075687 37 100.0 41 ..................................... CTTGCTCGGCAGTTGGGTAAAAACGGTAGCGGTAGGCTTTT 1075609 37 100.0 43 ..................................... TTGATTACACCCTCCGCCAACATCTCCTTTAAGGAGATTTCTG 1075529 37 100.0 38 ..................................... CTCTATCTACTAATTTCTGATCTAACTCACTAATATAG 1075454 37 100.0 41 ..................................... ACCGTACTGTACCTTGAAAACTCAACTACTAGCGATTAGTG 1075376 37 100.0 36 ..................................... TTCCAACGGAGCGCGTAAACTTGTTGGCCAACAGCA 1075303 37 100.0 35 ..................................... TGACCACGTACATCTTTTCTTAAACGCAAAGCCCA 1075231 37 100.0 36 ..................................... ACGATCTGACCATTAGGAGCCATCGGATCTTCTAGG 1075158 37 100.0 36 ..................................... GCTGTGTCATCAGGACTTCTAGGCTGACCTTGGGTA 1075085 37 100.0 40 ..................................... TTAACGGGGGCTGCGGTGGCAGAGCCTTGGACGATGCGGT 1075008 37 100.0 33 ..................................... CTGAGCAATGCGCTTGTACTTCTGCCCAGAAAC 1074938 37 100.0 41 ..................................... TTACAGCATGAGGAGGCCAAACTTAAACAACTGCGCTCAGA 1074860 37 100.0 32 ..................................... TTTTCCGGAGAGTGCGATCGCGCACATCCAGG 1074791 37 100.0 37 ..................................... GGCGGTGGCTTCGAAACTCGCCACCCCCTCCTCACTC 1074717 37 100.0 33 ..................................... TTTGAATCCCCATTTACTGAGAAAGTAGCAGGG 1074647 37 100.0 38 ..................................... GACGGTATCCGACCGAATTTAATGACACAGCCCCAAAT 1074572 37 100.0 40 ..................................... ATATAAACTTGTATGACTTTGCGAAAGATGCAGAGGTAAG 1074495 37 100.0 34 ..................................... CAGTGAATGCAGCGATCGCCGTCTTAGATGAAAA 1074424 37 100.0 35 ..................................... ATCAAGCCATGACCGATGATTGATAACTGATAACC 1074352 37 100.0 37 ..................................... ATGGCTCATGTGTTGGTCAACTTTTACGCAAATACGC 1074278 37 100.0 42 ..................................... GGTTGGTTAAAAGCAGACAAAGCGGCGATCGCTATTTGGTGA 1074199 37 100.0 36 ..................................... ACTGCTTCTGGTACATTTGTTGGTGCTGGCTTGGGT 1074126 37 100.0 32 ..................................... ATGACCAAACCAAACAACAAGCTAGAACAAAC 1074057 37 100.0 36 ..................................... AGCCTTATCTCTGAGATAGTGCCGAATCTCACCCTT 1073984 37 100.0 35 ..................................... AAGTTGCAATTGACTGGGCTTCTGGCAGTGATAGC 1073912 37 100.0 35 ..................................... TTAAGTATGGTGTCCGCCCAAAAGATGATGCTTCT 1073840 37 100.0 36 ..................................... GATCAAAGCCTTAACCCCCCCTCTCCTCGCCCTCAC 1073767 37 100.0 40 ..................................... GGCGGCGGGAGTAAGGGGGGTGCCGTTATCAACCACCATT 1073690 37 100.0 38 ..................................... GTAAAGATACCAAGCCGGGAACCCGGTGCTATTGTCGG 1073615 37 100.0 34 ..................................... CGATTATTAATGGATTAAAATCTCGTAGATACAA 1073544 37 100.0 35 ..................................... GCAAGCCCTTCCACTTGCCCCTCTGACAAGCCAAG 1073472 37 100.0 33 ..................................... AAATAAGCGATGAATTTACTGCTGCCATCAATC 1073402 37 100.0 32 ..................................... AGATTTAGTAGAAAGCATTGCCCCTGATGGGT 1073333 37 100.0 36 ..................................... AAGAGCTTTGTACCAACAGGCTTAAGACTTCTGGAT 1073260 37 100.0 36 ..................................... GCTAATTTCCATTACTGCCACTTCTGGTTCTGTATT 1073187 37 100.0 40 ..................................... AATGAAATTAATCTGTTAATCCAAGAAAGTAGTGACGAGA 1073110 37 94.6 0 ...................T........T........ | ========== ====== ====== ====== ===================================== =========================================== ================== 51 37 99.9 37 ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Left flank : GAAGAAGGTGGTTATATCTTACGATGTGCCGGAGGATAAACGCCGCACTAAAATCCACAAAATCCTGAAATCCTATGGTCAATGGGTGCAGTATAGTGTGTTTGAGTGTCAACTGACTGATACTCAATATGCTAAATTGCGATCGCGCTTACACAAATTGATTAAACCAGATACCGACAGCATCCGCTTTTATTTTCTCTGTGCTTGCTGTTTTGGTAAAATCGAACGCATCGGTGGCGAACAACCCCGTGATGAGACGATTTTCTTTGCTGAATGCGCGGATGGGTAGGTGTACAAAATCGTTGTTGAGGAAAAATGGCTGTATGCTTTGCTGTGCAGGCTTTTGCGGAAAAATTAAACCAAAATTACCCGCGCACCTTGTCTACTCTGGGTTTCAGCCATTCCTAGCAAATTAACTGACATTTCCTAGTGTTATAATCAACCCATCCGCGAAACTGAACCTTGAAAACCAAATACAGTCTAGCTTTCAGCCTCCGGCG # Right flank : TGTCAAGTTTTGCTGCGATCGCGCTACTAAAATAAATAAAGATTGATTGGTGCGATCGCTAGCTTGGAGTAAAAGATGATCAGGACTAAAGTCCTGACTACGAACTTTTTCACTAACACCAAGTTTGCACAACTCGTCCTGTTAATTCTTGTCCTAACCAGGGGGTATTACTCGAAAGGGTGTACAGATTTTTTCTTTCTACTGTCCAAGGTTTGTTGGGATCAAATAAAGTGAGTTCGGCTTGGTGATGAGGAGCAATTTTACTGACTCTTGCTTGTAAACATTGTGCTGGATTTGTACTCAAAGCTTGCCACAATTGTAATGCTGTAAATTCTCCAGTTTCAACGAGATGCTGCCACAACAAAGGTAATGCTAATTCTAAACCAATTGCTCCTGGTGGTGCTTCGGCAAAGGCTTGGACTTTTTCTTCGTAGGTGTAGGGTGCATGATCAACTGCGATCGCATCCACAATTCCCTGACGCACCGCTTCCCGCAATGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 3 1561878-1562238 **** Predicted by CRISPRDetect 2.4 *** >NC_019684.1 Nostoc sp. PCC 7524, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================================== ================== 1561878 33 88.2 51 ..A............G......T......-.... CTTACTGGGAATAGCAACATCCTCATCGGCGATGCTGTTTTTATGTTGGGA 1561962 34 100.0 47 .................................. TTGGGAATGACAATGGACTCATCGGCGATGCTGTTGCTATGTCGGGA 1562043 34 88.2 47 ..............T........A.....CA... CCGGGAATGACAACGGACTTGCCGGCGATGCTAGGAATATGCTCAGC 1562124 34 100.0 47 .................................. CTGGCAATAATAATTTTCTCTATGGCGATGCTGCTGTAATGCGCGAC 1562205 34 88.2 0 .............CT.............TA.... | ========== ====== ====== ====== ================================== =================================================== ================== 5 34 92.9 48 AACGCCAGAGGTGGCAACGATAAGCTCACTGCTA # Left flank : TTATAAGCAATCATATTTTACTAATTTGTTTAATTTTTATTGTTTCAAATACCAAAATTAATAATTGCCAATTTGGCTACCACGCAACCTGTAATTCATACATAATAAGTTACCCAAATTGACTAATTAAAGATGTGTTAGCTTTCGTTTTATATATAACAAGTCTTTTCAACGGTCTTGTCCACATTTGAAAAAGCTAGCCAGAATCTCAAAATAATTCCCGTATTTTTATTACCTAATCAAGGTAATTTTCCATTGACATTCTTTGAAAAATAAGAGGATATACGATTATGGACACTTATGTAGGAACACGCGGTAACGATAGGAAACCTCAAGACTTTACCCCACCTCTGCCTCCTTTCCCCAGTGCTATTAGTAACTCTATGGTTTATGGGGATACTGATGGCGAGCTAAATGACAATCAAAGAGGTGGGAACGACCGCATAGAGATTGTTGGGAATGATAACCGTCTCTTCGGCGATGCTGAGATTATGCGCGAC # Right flank : ACCGGGAATAATAACTCTCTCTACGGCGATGCTACAGATATGTACGACAACGCAATAGGAGGAGATGATATATTAATCGCCTCTGGTGGGGTCAACACCATGTGGGGGGACGCAGAGTTGCTAGGGACTGGAGTAATCACAGGGCGTGATATCTTCGTCGTACAAAAAGGTGTTATCCCCTGCCTAAGTGGTGACATGGACTACAACATCATTAAAGATTTTCGACCAGGAGAAGATCGGATTGGTCTTTCTTTTGGTCTGTTTTTCCACAAACTCTACTTTGGTGTAGACCATTGTAATCATACTACTTTAAATATTTTTAGTGACTCGACTCAAACTGACTTATTAGCAAAAGTAGAGAATGTCACCGCCCTCACACGTAATGATTTTGTTTATTTTTTTGGTTAGATAATGTTTGAAAACTATAAAACTAATGGCGTTGTATGGCTTATTAGTTAGAGGTTGTTTGAAAAGTATTCGGCTGTGACTTTAAGTACATT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.09, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACGCCAGAGGTGGCAACGATAAGCTCACTGCTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 4 2597398-2600981 **** Predicted by CRISPRDetect 2.4 *** >NC_019684.1 Nostoc sp. PCC 7524, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 2597398 37 100.0 36 ..................................... CACAACACAAACAGTTCGAGCCTCTGGGCTGGCTTA 2597471 37 100.0 35 ..................................... TTCAGCGTGATTATGTGATCGATCAGTTACGATCC 2597543 37 100.0 35 ..................................... CAAATATAGTAAATGAACTATCTAGCACTCGGACT 2597615 37 100.0 33 ..................................... AAGCCATTTTTACTTTCCGCGTAGACCCCTATT 2597685 37 100.0 34 ..................................... AACTAATCGATTTGTACAGCCACCCGGTTGAGTT 2597756 37 100.0 36 ..................................... TTAGAAATATTCACCAAGTACGGCGGCTCTGCTCAA 2597829 37 100.0 36 ..................................... CACTGATTGATAACTTGGCTTAAACCTCCTATAGTT 2597902 37 100.0 34 ..................................... ACTTGAATGTCGTTGTTTGTTTGCTGTGCTGTTT 2597973 37 100.0 36 ..................................... TACCCACCTGATTGGGTAGGTATTCAAGAAATGAGA 2598046 37 100.0 34 ..................................... CGGATGTCACATAGATAGATGATTCATTTGTCGA 2598117 37 100.0 35 ..................................... TCAGGCTGGATAATCCATAAACCTTTACGCTTACC 2598189 37 100.0 42 ..................................... AACTTACTTAAAAGCTTAGATTTTGCTGTAACCGATGCCAGC 2598268 37 100.0 43 ..................................... CTTTAACTTAACTCAGATGCCCTTAGCGGTTAAAGGCTACCAG 2598348 37 100.0 34 ..................................... AATCACGCCAGTGATTGGGATTGGGTACTGGGGA 2598419 37 100.0 42 ..................................... AAAATTTAAAAACTATCCGAGCCATGCGATCACGCCTCAAAG 2598498 37 100.0 50 ..................................... CCGAAGGGTAGGCAATGTGTGCGAAATAGTCGCAGGCACTTGCTTAAATA 2598585 37 100.0 35 ..................................... CCCTTACTATACCGTATCGATTGATGGCAGAGGGG 2598657 37 100.0 34 ..................................... TTCCCCAGAGTATTTACCGCTTCTTGACTCTACA 2598728 37 100.0 35 ..................................... TAAAGCTAAACGCTATATTACTAAATTTGAACTAA 2598800 37 100.0 35 ..................................... CTGCACTTACACCGCCTTGATTAGTGATGCCGATG 2598872 37 100.0 35 ..................................... ATCAGCTATGGTTCCCCCGATTCTCGGATTGATGG 2598944 37 100.0 32 ..................................... AGTGGTGAGAGGAATGGAGGGGGAATTAGGAA 2599013 37 100.0 39 ..................................... AAGTAGTTGACAAATGTAAAGCTAGGGACTACAGTTATA 2599089 37 100.0 42 ..................................... GATTTTCGGAATCTACAAAAATTACCATGTATCGTCTAGCGA 2599168 37 100.0 36 ..................................... AATCAGCTATTCAACCTGCTGCACCTGAACAGGCAG 2599241 37 100.0 39 ..................................... TGATTCACCACGGGAGGCAAATTTTTTAATAACGACAAG 2599317 37 100.0 39 ..................................... ATCTGGATAATTTACTGCATCCTTAGCTGCACCGAATTG 2599393 37 100.0 37 ..................................... AAGCTGCTCCTCTGCTTTTCGCAGCAATGAAAAGTAA 2599467 37 100.0 41 ..................................... GGTGTGCCACTGGCGGCCAAGTTTTTCACACACTCGCCCCG 2599545 37 100.0 35 ..................................... TAGGGCTTCTCGCAACATTTCAATTGCTTGTTCTA 2599617 37 100.0 41 ..................................... CCCAAAGATACCAACAAGAGCATTAAAATCAATGCTTGCGG 2599695 37 100.0 38 ..................................... GTAGAATTAATCGCAGATAACCCAGATGTAACCCTAGA 2599770 37 100.0 36 ..................................... GAAAATAATATCACCAGAATCAAGGGTGATATGGCA 2599843 37 100.0 38 ..................................... GGGGAAGTCCAGCACTGTGCTGAAGTAATCCACCCACG 2599918 37 100.0 37 ..................................... ACGGCGGCGGGGGTGGGGGTAGAGGAGGGACTACAAC 2599992 37 100.0 40 ..................................... TTCTCGATACGCTAGCGCAGGCGTTGCTGTTTGCCCTCGA 2600069 37 100.0 34 ..................................... CTAAAGACGCTCAGATGGTGCAGGGGCGGATTAA 2600140 37 100.0 35 ..................................... TTGCGCCATATCGAGCAGGGGGTGGAAACCTACGA 2600212 37 100.0 34 ..................................... ACCCACGTATCCAGTGACACGCTCAGTTTCAGAA 2600283 37 100.0 33 ..................................... ACGCCAAAAAGGTAGAAGGAACAACTATTGGTA 2600353 37 100.0 35 ..................................... CTGCTGCTAAGGCTTCCCCCATATACTTTTTAATA 2600425 37 100.0 36 ..................................... GTTTAATTGCATAGCAACCTGCAAAACGTCCTCTGC 2600498 37 100.0 45 ..................................... GCTCACATTCCCCGTCACCTCCCCGATGTGGGATAAGGGAGATTG 2600580 37 100.0 37 ..................................... AAGCTAGCCAGTTTTATTGGCGAAAAATGTACTATTT 2600654 37 100.0 35 ..................................... GGGCGACTTCCTCCCCTTGGGGGGAAGTGGTAGCT 2600726 37 100.0 35 ..................................... CTAGCCCTTAGCCCCCGCCAAATTAGGGAGCTAAC 2600798 37 100.0 34 ..................................... ACATTACAGGAGTTAGTTGAACTCCGTGGGGAAT 2600869 37 100.0 39 ..................................... CGGCTGCGCCCAAAAAGATGCTTTGTTCCAATTCCTTAA 2600945 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================== ================== 49 37 100.0 37 ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Left flank : GCGCCCAGCGATTACCCAGAATTTGCTCAGTTTTTGGTAGAACAGGGCATTGATTCTATTAGTCTCAATCCTGATTCGGTGTTAAAAACTATGTTAGAGGTGGCGAAGGTAGAAAGTAGGTGACAGGGAACAGGTGACAGGTGACAGGTGACAGGTGACAGGGAACAGGGGAACCAGTTTCTGTAGGGATGGGTTTATCAGAAATTTGTCTACCTACAGATTCACTGATTAAACCCGCCTCTACTATCTTTGATTGCAACTCGGTATGGACGAATGCGCGGATGGGTAGGTGTAGAGAAATGCTGTTTTGGAGAAATGGCTGTATTCCTTGTAGGGCAGTCTTTTGCCGAAAAATTAAATTAAAACCATCCGCGCACCTTGCCCAGTCTTGGTTTCAGCAATTTCCCTTAAACCAACTGACGTTTTTGCGTGTTATGATTAACCCATTCGCGAAACTGAACCTTGAAAACCAAATACAGACTAGCTTTCAGGCTGCCGCT # Right flank : CATTAATGCTAGGATATGATTGGCGTAAAGAAGGATTACAAAAGATAAAGTTATTTTCTGATTTATTATAAATTAAGCAATGGCTGTTTAACAAAATCTTTGCAAATAAATACTATAAAAATCAAACATAATTGAATTATTCCAATAAAAAATATGAAGCTTTTGATAAAGTAAATACAGATATGGAGGTAAGATTATGACCCAATCTTTGCCAAAATTACTGACATTTGATGAATTTATCGAATGGTATCCCAACGATGGTAAACGCTATGAATTACATAACGGAGTAATTTTTGAAATGCCCCCTCCAAGCGGAGAACATGAAAAAGTTGTGGGATTTATAGCTCGTAAGTTAACTGTCGAGTTTGATCGCCTGAACCTTCCTTACACCATACCCAAAACTGCATTCGTCAAAACTCCTACTGCTGAATCTACTTATTCTCCCGATGTCTTGTTATTAAATCTAGACAACCTCAGCAACGAACCACTTTTTCAAAAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 5 2915314-2918932 **** Predicted by CRISPRDetect 2.4 *** >NC_019684.1 Nostoc sp. PCC 7524, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2915314 37 100.0 34 ..................................... TAGACGATTCGGAACTACTCATTTACTCCCCCTG 2915385 37 100.0 35 ..................................... GTACCTTTTGTAACGAGTGCCGGGCTTTTGGTTAA 2915457 37 100.0 35 ..................................... CTAAATATCCCAACTTCAAGTCTAAACATGGTAAG 2915529 37 100.0 35 ..................................... CGCTGTCTTCTTTTGCTTCTATCCATTCCCCTACT 2915601 37 100.0 41 ..................................... TAATCTCTAATCTTCTAATCCTGCTAGGTGTGAAATCGCGC 2915679 37 100.0 32 ..................................... AGCAAACAAGTTGAAACTAGATACGCTGACAG 2915748 37 100.0 33 ..................................... GTTCTGAGCTATCGCATTCTATTTCTTGAAAAG 2915818 37 100.0 41 ..................................... CTGGAATGATTGGATTTGTAGAATGTTTCCGGCTGATAGAG 2915896 37 100.0 36 ..................................... TTAGTATTGCTCTTATTTCTTCTTGGTCGTTCTCGC 2915969 37 100.0 32 ..................................... ACCATCAGGCATCGGCATCGGTACCCACGCGC 2916038 37 100.0 38 ..................................... AGCAGTACCGATTAAAAGTGAACGTCTCCCCCTCTTTA 2916113 37 100.0 40 ..................................... GCCTTAATCCTAGACACGGAGATTAATCGGCTGATTACTA 2916190 37 100.0 40 ..................................... TTGCTGGGCGAAGCTCTGATGATTTGGCAATAATATCAGC 2916267 37 100.0 33 ..................................... GCATCTTAAACGCCAAATCAACAACAGTTAGTT 2916337 37 100.0 35 ..................................... AATAAGTCTACATAATACTCAAAAGCATTAGCATT 2916409 37 100.0 37 ..................................... TTCATACTTGGGGCGAAAACTTGTGCAGACTACCTGG 2916483 37 100.0 36 ..................................... GATATCCCTTTGGCAGATAAACCAGCCTGATCAACC 2916556 37 100.0 38 ..................................... GATTAGCTGGTAGATGGGAGCATCAAGGCAGTATTTTC 2916631 37 100.0 34 ..................................... AAGGAATTTTTAATCGCATTTGCCATTTTACAGG 2916702 37 100.0 38 ..................................... CATGACTCTGATAGATACCCTGAGACTGAGATTACAGA 2916777 37 100.0 40 ..................................... CTAGGTTAACCCGTGTGAGGTTGATAACATCCGAGGGTAC 2916854 37 100.0 35 ..................................... ATGGATTCAGTTCTAGTTACTTAAAAGAACCTTGG 2916926 37 100.0 39 ..................................... TGGAAGTAAAAGTTTTAACAATAGACGGAGACGAGGAAT 2917002 37 100.0 35 ..................................... TTATACATACTGCACTTACAGGTAAAGAACTCATT 2917074 37 100.0 35 ..................................... TATCAGCCCACTGCGCGATCGCTTCCAGTTGAGGA 2917146 37 100.0 34 ..................................... GGGTATTCCATCTAGAAAACTGAATGAGAGAATA 2917217 37 100.0 36 ..................................... AATCATTGCTCGCTCTCCTCAAAAATTACAGTTAAA 2917290 37 100.0 35 ..................................... AGAGCCTGGGGCAATGATGCCGATGCCCTCGCCGC 2917362 37 100.0 34 ..................................... TTTGCTCGTTTCTAGTATCTAGTGGATCTTCCCA 2917433 37 100.0 34 ..................................... TTCCTTGACCTTTGCAACCTTCTTGGGTGCAGGT 2917504 37 100.0 37 ..................................... CAGCAGCATTAACACTGTTCCGCTCACAGGGACAGCA 2917578 37 100.0 38 ..................................... GGCATTGTCCCTCAAGGTATTTGACTTAGCTAGTCGCG 2917653 37 100.0 35 ..................................... CAATTCCTTCCTTGGGATGCAGTTGAGTCTGACAT 2917725 37 100.0 39 ..................................... ACCCCATCTTTAAATGCTTTGAATTCGGTTTGGCAATTG 2917801 37 100.0 35 ..................................... CGGGTTGAAATTTGTAGGGCGAATTTCTAATAGAA 2917873 37 100.0 41 ..................................... TAGCTATAGCCATAGCAGGGGTTGGAATTTTAGGTCAACGT 2917951 37 100.0 35 ..................................... AAAAAATTCTTAGAGGATGAAAATCATGAAATTTG 2918023 37 100.0 38 ..................................... AGGATGAATTGGTACAAGGGTGACGAAAATGTTTCAAG 2918098 37 100.0 38 ..................................... AACCTCTGTACTAGCACTAGCACCGCTTGCGGAAAGGG 2918173 37 100.0 32 ..................................... TTACCACTGCCACGCCTGCCTAAAAAATAAGG 2918242 37 100.0 38 ..................................... TTAATGTGGGTTAGTACGTATGTTTCAGTCCATTCCTT 2918317 37 100.0 35 ..................................... AATTCCAGGCTTCATTCCCACTGACTCGGTAATTG 2918389 37 100.0 35 ..................................... CAACCAGCATTAACACGCATTGAATCAAAAGTTGA 2918461 37 100.0 35 ..................................... CAAACAACTAAATTCATAGTAACAACGTTGGTATA 2918533 37 100.0 39 ..................................... ATTTGATTTTTGTATTCTTCAAACTTCATTTTGTACACC 2918609 37 100.0 35 ..................................... AAGCCAGGGGCGAAGGAGAAGCTAGAGGCGATCGC 2918681 37 100.0 35 ..................................... TGACATACACCCGATGCCGCAGCCGATACGGTTTG 2918753 37 100.0 34 ..................................... TCTACCAGCCTTGAAATAACTCCCAAGACTTGTG 2918824 37 100.0 35 ..................................... TTCAACGTACCGAGGCACAGGCTTATCTGCGTCAG 2918896 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 50 37 100.0 36 ATTGCAATTAACACTAATCCCTATTAGGGATTGAAAC # Left flank : TCAAGAATCTGGTGTATTACCGATAATTCTGCACAATCGCCAAGGCGGAGCCACAGACAACATCAAAAAAACCTATGATGAGGTCAATACCCCAGAACTAACTCAACTCAAAGAAAAAAGTCCTCAAGGAAACTGGACTTTGGAAGTGGCAGATAAAGCCCAAGTCGATACAGGCAAAATTCGCAGCTTGACTATTGAGATTGGCTTTTAACGAGAAACGGAACAATATTAGGACTAATTCACTCGGAGAAAAATCAGATTCCTAATAGTCCTATGCGCGGATGGGTAGGTGTAGAATTTCCCTGGTGTGGAGAAATCGCTGTATTCCTTATCGGACAATCTTTTGCAGCGCAATTAAATTAAAACCATCCGCGCACCTTTCCCAATCTGGGTTTCAGCAATTTCATGTAAATCAAATGACTTTTTCCTGTGTTATAATCTACCCATCCGCGAAACTGAACCTTGAAAAGCAAATACACACTAGCTTTCAGGCTGCCGCT # Right flank : CATAGAAATTTCCAGATATCCAAAATTTAGGGTGCGTCAGTGCGAGACTGTAGCAAGAAATTATTCATACTGACGCACCCTACTAACTGATTTTTAATCAGGAGAGTGTCAACGGAATTGCCGCCTTCACTGACGATTATCTATTTGGGCGCGTTGCAAACTACCTGAAAAATCAACATAAACACTTTTCCATTCAGTGAAGACATCTAAAGCGGTAGTGCCGGCTTCCCGGTGTCCATTACCAGTTTGTTTCACACCGCCAAAGGGTAAGTGTACTTCTGCGCCGATGGTGGGGCCATTGATGTAGGTGATTCCGGCTTCGATATCGCGCATGGCAGTAAAAGCCCGGTTGATATCACGGGTATACACTGAGGAAGACAGACCATATTTAGTATTATTGAGAATAGCGATCGCTTCCTCAAATGTACTCACCTCCATTAATGCCACCACAGGGCCAAAAATCTCTTCCCGCGCCACCCGCATATCAGGCGTAACGTTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA //