Array 1 1412786-1410428 **** Predicted by CRISPRDetect 2.4 ***
>NZ_OU015319.1 Cloacibacterium caeni isolate Isolate1 chromosome 000000F_arrow Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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1412785 36 100.0 30 .................................... TGCAAGGATTAATTAATAGAAATAATTTAG
1412719 36 100.0 30 .................................... TCTATGCTGCTATTCCAGCAGAGGTTTTAG
1412653 36 100.0 30 .................................... CCAACAAAGAAACAGTTTATTGAATTGCTA
1412587 36 100.0 30 .................................... ACGGAAAAGGAAAAAGGACAAGCCTCTGAC
1412521 36 100.0 30 .................................... AGATTGGTATAATGCAGGGCAAATTAGAGA
1412455 36 100.0 30 .................................... GGGAAAATTGAAATTGACGGCGAATGATTA
1412389 36 100.0 30 .................................... CAGTTTCAAATAATGGAATATTTCAGCCGA
1412323 36 100.0 30 .................................... AAATGCTTTTTATATTCGTAATTATGAAAC
1412257 36 100.0 30 .................................... ATGAAACGGAATTAAAAGCCAAATTAATAG
1412191 36 100.0 30 .................................... AATGATGCAAGTTATATAATTTCGCCTAAT
1412125 36 100.0 30 .................................... ACACTGACGAGGATTGCAGAAATCCAGATA
1412059 36 100.0 30 .................................... GGATTTATAGATTTAACACAAGATTATTAA
1411993 36 100.0 30 .................................... GAGGGATAAGTTTCAATAAGTCGTTGGTTA
1411927 36 100.0 30 .................................... TTCTTCCAAAACATTACCTTCTTCATCACA
1411861 36 100.0 30 .................................... GTAAATCTCTTTATGTCGTGGGTCGTAAAA
1411795 36 100.0 30 .................................... AAGAACCAAATAATGAAAACGAAATAGGTA
1411729 36 100.0 30 .................................... AAGCGTAAATACAAGCGTAGAAGCATTCCA
1411663 36 100.0 30 .................................... TCTTTAGAATTACCATATTTCAAAATTCTA
1411597 36 100.0 30 .................................... TTTTTTTGCTTTTTTACTTTTGGGGTTTAA
1411531 36 100.0 30 .................................... TTTTTAAATTACTGATATAACCTTTTCGAA
1411465 36 100.0 29 .................................... TTCAATTAACGCTGTTTTAGGCTCGAAAG
1411400 36 100.0 30 .................................... CTTTATTTTTAAAAGGTTAGGATACAAATC
1411334 36 100.0 30 .................................... GAAAGTAACATTCAGATAGCGTGCGTGAAT
1411268 36 100.0 30 .................................... GTTGCTGGTATGCACTATGCAGCTTATGTA
1411202 36 100.0 30 .................................... CAAGAAAACAATTATATGCCACTAGAACCA
1411136 36 100.0 30 .................................... CAATAGTTTTTTGCCATAGTTTCATTATGA
1411070 36 100.0 30 .................................... CAGAAAGAATTTCCAGACGAAAAGTTTGAA
1411004 36 100.0 30 .................................... CTTTGCCATGTGATACTTTGTGTGTTATCG
1410938 36 100.0 30 .................................... TTAATTTTTATTAAGAATTATGTACAATAA
1410872 36 100.0 30 .................................... ATTATTCATTTGTAGCAGAGGGAGGAATGA
1410806 36 100.0 29 .................................... TTATTTGAGCCTTAATTAATCCCATTGTT
1410741 36 100.0 30 .................................... CGGGATATGTTCAAGTTTATAGACCGATAA
1410675 36 100.0 169 .................................... AGTTGGCTCTCTACCTTCTGATAATCAATAGGTTAATGATGAAATATCGTGTATAAAAATGCTTCTTTTTTGCCTTGATACAGCAAGATTGAAGCATTTTTTGGTTTCTAATGTTGTGGTTTACAAACACCAATTAATTATTTTTTATAGGAGTGTTTGTGAATCTCCC
1410470 36 88.9 0 T....C..........................GG.. | GG,CCC,A,G [1410437,1410440,1410462,1410466]
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34 36 99.7 34 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT
# Left flank : CTCTTAACAAAGAAAAAGAAGTAAAAGGAAAAAAAGTTTTATATCCAATAGCAAAAAGTAATCATAGAGATGTTGTTTTAAAAAAAGGACAGCTTGTTATTTTCTATGATAAAACTATTGAAAACCCTAAAGATATATCGGAAATATATGATTTTAAAGGGAGAATCTATATAATTGAAGGTTTATCAATCAATAGGATTAAATCTGGTAATAATTTATATGAATTTGGAGTAATAATTTTAAGATTCTTCAAAGAAGCAAGAAAAGCAGATGAAATTAAAAAAGATAGATATAAACCCGATGGAGACTTTAAGTTAGGTGAAAATAAGCCAACAAGGAAAATGAGTCCTAGTCAATTTACAGCTTTTGTAGAAGGCATTGATTTTAAAGTATTGCCAACTGGAAAGTTTGATAAAATTTAATTTTCTGGTAGTTCTTTGACATTCACGGATAATCATAAGCAACCAAACCACAACGGAGTTTCGGCGATAGCTCACTCG
# Right flank : CGACGAAGTCAAAAAACGATATTAGTTGGCTCTCTACCTTCTAATAATCAATAGATTAATAATGAAATATCGTATATAAAAATGCTTCTTTTTTGCCTTGATACAGTAAGATTGAAGCATTTTTTGGTTTCTAATGTTGAATTTTTATTTTTTAATAATCAATAGGAACGGGCTTTAGCCCGTTTTGAAAATTAAAAGATCTAATGGCTTTAGCCAAAAGTTAAAAGATAAATTTTTCTCTAGAATAGTTCTAATTGTACTGGCTGAGGTGACTTTGGTACTTCGGATTTTCCCCAGAAATTAATGATATTTCCGTATTGTTTATCGGTAATGCGCAGAATGCTTACTTTACCTAATGGTGGTAAGAGTTTATTAATTCTTTTTTCGTGTACATCTGCACTTTCGCTACTTGCACAGTGTCTTACATATACAGAATATTGCATCATGCTATATCCATCTTTTAGCAGATTATTTCTAAATCCAGAAGCGTTTTTTCTGTC
# Questionable array : NO Score: 6.26
# Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT]
# Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37
# Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41
# AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0.27,4.87 Confidence: HIGH]
# Array family : II-C [Matched known repeat from this family],
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