Array 1 187890-184084 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKDM01000002.1 Klebsiella pneumoniae strain EuSCAPE_FR052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187889 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187830 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187769 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187708 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187647 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187586 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187525 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187464 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187403 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187342 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187281 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187220 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187159 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187098 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187037 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 186976 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 186915 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186854 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186793 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186732 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186671 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186610 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186549 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186488 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186427 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186366 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186305 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186244 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186183 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186122 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186061 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186000 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185939 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185878 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185817 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185756 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185695 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185634 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185573 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185512 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185451 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185390 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185329 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185268 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185207 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185146 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185085 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185024 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184963 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184902 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184841 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184780 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184719 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184658 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184597 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184536 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184475 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184414 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184353 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184292 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184231 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184170 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184112 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //