Array 1 1327370-1330555 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150266.1 Gleimia europaea ACS-120-V-Col10b acsNW-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 1327370 28 100.0 33 ............................ CTCTTCTGATGCGACTTCAGTGAAGTTGAAGTT 1327431 28 100.0 33 ............................ CCAATCGTCGGGAAAATCCATTGCTACTCCTTA 1327492 28 100.0 33 ............................ CGCCAGGCGATCCCGTGATTGAGGTAAAAGGCC 1327553 28 100.0 33 ............................ CCGCCCCATCCACCACGCACGCGGGCGCGGTAA 1327614 28 100.0 33 ............................ CTTTCACCGCGTCCCGTAGCGTCAAATACTGCG 1327675 28 100.0 33 ............................ CACGTCAGTCGGGAATGACGCCGAATATTGCCC 1327736 28 100.0 33 ............................ CACGAGCGGTTCGTGGCAGGGCTCCCAGTCCAA 1327797 28 100.0 33 ............................ CGCCAGGTGGACTTCTAGCGGGCTCACGATTTA 1327858 28 100.0 33 ............................ CATTACTTCACACACGGCGAATATACCGCGCTT 1327919 28 100.0 33 ............................ CACAGTCAGACTGATGGCAGTGGTTTAGGGGCG 1327980 28 100.0 33 ............................ CTGAGCAGATTATTCATTTTGACTACATTACTG 1328041 28 100.0 33 ............................ CAGATGTAGACACCGTGGAAGCAGGTGTGGACA 1328102 28 100.0 33 ............................ CTCGCACTTGGATTGTTGCGCAATACCTAGGAC 1328163 28 100.0 33 ............................ CTGTGCCGCGCTCAGCCGCCACGCCTATAAGCG 1328224 28 100.0 33 ............................ CTTCGATCCGCATACAAGCGACTTATCGCTATC 1328285 28 100.0 33 ............................ GATCGGCCTTGACGCTCTTTACTGCCTCCAGCT 1328346 28 100.0 33 ............................ CGCGGATACGCTGCCACCTAGTAAAAAGGAAAA 1328407 28 100.0 33 ............................ TGGGTCGCATGGAAAGAAGCAACGGGAGAAAAC 1328468 28 100.0 33 ............................ CTACCGGTTGGTGTTCGAGTTCGAGCAGATGGG 1328529 28 100.0 33 ............................ CTAAAAACCGAAATCGACGCCACCACCGCGCCA 1328590 28 100.0 33 ............................ CCGGTCGAGTCCTGCTGACATTTTGCGGATGGG 1328651 28 100.0 33 ............................ CTGTCGGAGGCTAAACGGCGCGGGGGAAGTGTA 1328712 28 100.0 33 ............................ CGACTTATTTAAGGACTTATACGGATTCTCGCT 1328773 28 100.0 32 ............................ GAAATCAGTCGGATCATTGGCGGCTTGGAATG 1328833 28 100.0 33 ............................ CTTCGTAATGTACTCGTACGACATTTGCACCAA 1328894 28 96.4 33 .....A...................... CGCACAGTTTGAGCGGGTATGTCTTTCACGACA 1328955 28 100.0 33 ............................ CGGCCCCGCTCTGCTCCTTTGGAAGTCCTGATC 1329016 28 100.0 33 ............................ CGACCCAACCGTCCTTCTCGAAGTTCACGAAGC 1329077 28 100.0 33 ............................ CTCGTAATCGTTCATCAATCGTCCTGGGCGATA 1329138 28 100.0 33 ............................ CGCCAAATCCAAAACGGCGAATGGGAAGCCCCA 1329199 28 100.0 33 ............................ CCCCGCCAAAGCCGTCAAAGGAATCTACGCAAA 1329260 28 100.0 33 ............................ CTGATCACAGCGGTAAGTAAAGCCCAAAAGGCT 1329321 28 100.0 33 ............................ CCCACAACGAGGCCTCCAAGGCAAACAGGCCGA 1329382 28 100.0 33 ............................ CTTATGTGGCAGATTATGCGCGTAGCGCATATA 1329443 28 100.0 33 ............................ CGAGTTGCCAGAGCCGGTGACTGGTCAAGATCC 1329504 28 100.0 33 ............................ CTCGGGCACCGCACAACACCACAGGTGGTGGTA 1329565 28 100.0 33 ............................ CCATTGATTGTGAGTTGATCGAGTGATGGTGGG 1329626 28 100.0 33 ............................ CTAGCTCCCAAATACCGCTAGCGAGCGTGGACA 1329687 28 100.0 33 ............................ CGCGGTGATCCCCTTGTGGATGTCCTCGTCAAT 1329748 28 100.0 33 ............................ TAGTGAGGTCTTCGGGCAAGTACTGGGAGAGGT 1329809 28 100.0 33 ............................ CTCAACGAATTACCGGGGTTAGTTGTGGAGATG 1329870 28 100.0 33 ............................ CCACCCCGTAGGCTCCCAACTCATCGAGCGAAT 1329931 28 100.0 33 ............................ CGTGACGGCTTTCCACAAGCCAAACCCCGCTAC 1329992 28 100.0 33 ............................ CAATCTCAAAACGCTCCGCAACATTGACACAAC 1330053 28 100.0 33 ............................ CATCCAAAAGCTCACGAAGGATTACGCAGTCTA 1330114 28 100.0 33 ............................ CGACGCGGATGGTTTGGTGACGAACTTTTGGCG 1330175 28 100.0 33 ............................ CGCCTTCGACGCGCGGGCGATGACCTCTCCGAC 1330236 28 92.9 203 ........T..................G CACTAAACCCGGTGGTGAGCGCGTTACAATAGAGGGGAGCGGGTTCCCCCGCCGCCCTGAAAATATTGGGCTAGACGTGAGTCGAAATGGCGGGGATTGAATCCGCTCGTTTATTCCAAGATGATTTCTTCTGAGTTTTCTCCTTGTTTTCAGCAGATGCAGGGTGATCTCACACGCGACCAACAAAGACTACAATGCTATGT 1330467 28 85.7 33 ...T....T...TT.............. CATTTTTTCAATTTCGGGTTCAAGCACCTGCTG 1330528 28 75.0 0 C.T.....T....C.........A.T.T | ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 50 28 99.0 36 GTGCTCCCCGCGCATGCGGGGATGACCC # Left flank : CTGTGGCTGCTGGCACCAACTACGCTGATTTCTAGGGCTTGTCATGATGGTGCTGGTAACGACCGCCGTGTCAACGGGTTTGCGCGGCGAGTTGACGAGATGGTTGCTTGAAGTGTCGCCGGGAGTTTTTGTAGGAACGGTATCTTCGCGAGTGCGAGAGCAGATATGGGAATTTACTTGCGAGAATATTGGTAGCGGTAGGGCAACCTTGATCTTTCCTCAAAGGAACGAGCAGCGTTTAGGGATTAAGACGATTGGTGATGCTTGGGAAGCTACCGACTTTGATGGCATGACTCTCATTCGTAGGCCTGACCTGTCTGGCAAGGAAGTTATGGGCGAAGTGACGGATCGTGCGAAGTTGCGCGACGCTGCGGGATGGTCGATTGCTGGGCGCAGGCGTTACTATAGAAACTCGATCGAGCGGCGGCAGCGGAAATAAAGTCGGTCAGAAATACGGGTATGATTTAATTATTCCCTTAGGAAATCAGTGTTTCCTAAGT # Right flank : TACAAACTGCCGCGCCAGGCTTTAGCAACCGTCCGAAACGCGGGTCCAGCTTCAGCCTGCACCCGTGAACGCACCTACACGGCTGCCTGATGCATCCACACGGGCGGATGCTTATATTTAACAATGCTGACGGATTTAGAAAGGCAGGAGGAAAGCGGTGGCTGACAGTTTCACCCCGGGCGACTCATTTGACGGAGAAATCCGCGTGCCCGGCGTAGAACGCGTTTTCAAACCACGCAAAATCCTCGCAGTCCTCCTCATCCCCCTAGCCATGTCACTAATCGCAGTGTCGTCCGTCAACATAGCCCTCGCCACTATCGGCGTAGGCCTGAATGCCAGCGACTCCGACCTCCAATGGGTGCTCTCCGGCTACGCCCTCGCCATCGGCATCGTGCTAGTACCAGCCGGGCGACTCGGCGACCTCATCGGACGCGGCACCCTCTTCCAAATCGGCCTCATCACCTTCGTAGTCGGCTCCATCCTCTCCGGACTCGCACCAG # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //