Array 1 42610-43570 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384578.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00013.13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 42610 37 100.0 34 ..................................... CAAGTAACGAAGATACCGACACCTCTTCGCCCGC 42681 37 100.0 33 ..................................... CTATCGTCAGGGACAGGGAGCATTTTTCGCGGA 42751 37 94.6 35 .........G.....A..................... CCCGTTGCGTTGCGTGTATGAATGAGACTCTATCG 42823 37 97.3 35 .....................T............... GGTATCGACCCAGATTTTTTGATCAATCATTTGCG 42895 37 94.6 35 .........G...........T............... CCCAAGTGCACCTGACACGCCCACACATCGCCAGC 42967 37 97.3 34 .........G........................... TTTTACAGCCAGTATGAATTGATCGTGGATGTTA 43038 37 91.9 34 .........G...TC...................... GTCTTTTTCGATCAATTGCTGTAGGTCAGCGAAG 43109 37 100.0 34 ..................................... AAATACCAAACTGCTCAAGCACATCTCGGGGGAT 43180 37 91.9 34 ..............C.C...................T ATGAGGTCGATTTCGGTTTGGTTGAGCTCTCTAT 43251 37 94.6 34 .........G....C...................... GTTAAACGCAAATCGGGCAAAGGACGCCAAGTTG 43322 37 94.6 33 .........G....C...................... AATCATGTCTGCGGTTTTTACGCTTACAGACTG 43392 37 94.6 34 A........G........................... GCTGGTTCCACGTCGGTAAATCTAACGCAGTCTG 43463 37 97.3 34 .........G........................... GTCGACAAGTGTTACGCCAACGAGTGCGAAGCCG 43534 37 94.6 0 .........G......................A.... | ========== ====== ====== ====== ===================================== =================================== ================== 14 37 95.9 34 GCGTCGCTGAAGGCTTAGCCGCTAAGGCTGTTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CCCGATACCGACAGCGAATGCCATGATTGATTGACCTTGCGGTTGTGGGGCTGGTAATTTTAGGTCGGTGGCCCGGTGCGGTTGGGCCCCAAACCCCAAGGATATTTTTCGACATGGAGAGCCGATGCATGGGCGATTCGCTGTTGCCGTTACAGCACTTACTGCCGTTGCGCAGTGTGGTGGTTTGCTTGCAGTGTGTAACCGCGTGCGAATTAAGTTTTTTTCATCAGCCCGCCATGAGCGCATTCCTGCGCAATTTACTGGACCACCCGGATCAGTTCGATCAGTTCCTGCTTGCCGATACGCCCGAAAGCGGCCGTCTCTTTTATAACGAAGGTGATTTTTACCGATTTACCGTGGTTGCACTGGCCGGTGGTGAGGTGCTGCTAGCGCGCCTGCTGGCGCGTTTGCGCAATTTACCTGCGGCGGCAATTGCGGCCCGGTGCAGCGGCGCGTTTGCCGATAATTGGCGTTGGGCAGGCTTTAGTGATGGCTTTAAC # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCTGAAGGCTTAGCCGCTAAGGCTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 116942-116623 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGB01000006.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 116941 35 100.0 34 ................................... CAGAGACTCCATACCGCCTTCAGAACGAATCACT 116872 35 100.0 35 ................................... CATTTCCCTGCCGACTTTTACCACGACCATCAGCG 116802 35 100.0 37 ................................... AACGAAAAAAGATTAATCTGCAAGACCACCAAGCTGT 116730 35 100.0 38 ................................... GGGTGCGACAAATTGCCGTACGGAGGCAGTGCAGCTCT 116657 35 82.9 0 ......................AA.A.T..G...T | ========== ====== ====== ====== =================================== ====================================== ================== 5 35 96.6 36 GTCCGAAGAGGGCTTAGCCGAAGGGCTGTTAAGAC # Left flank : AAAAACAGGATGACGTACAACATTCATTAGATGGTTTGATTGCAAAACTGAAAAAACTGGGAGAACCGCCACTTATCATGTTTGTGCCGAAAATCAGATTGAGCAATACCCAGCAGGATCAACTCGATCAGTACAGCAATTACAGTGTTGCTAATTTCCCCGGAACACTGCAGACGGCTTTGGGCAATGCCTTGAATAATGTATAACCGACGCCAAAAGGCTGGCAAAGATGAGCAACCACTGGGCATAGGGGCACAGTCCTGAGTATAAGCAGGCCAGATCAAACTGTGGCGCAATATTCAACTGGTTGTTTAACAGACTGATTTATAACGATTTTTTACCAACAAACACGAGGAGGTTTGATTATTCAATGAAATCAACAGGTTGCAACACTTATTCGGGCCAAATCAGGCCAAAAAACGCCATTGATGGTATGGGCGCAGGGAGGTTTGACAAAAAACGCTGTAAGTGTTTGATTTTAAAGCGCCTATTCGAGTACT # Right flank : CGTGGTTCGTGCTTTATCGAAGCCCCATCGTCGTGGAGACATTCACCGGATAATTTAGGTCAGGCTTCAGGAATACGACTGAAGCATGAGCATTACGTTTAATTAGCGCTGCGTTCGATTTATTTAATTGTTGGGTGAAAAAGCGTAAATGATTAAATTTGTTGGCCCGCACGCGGTGTTAATTAAGTGGTGCATAATGTCACTGAGGAAGCGGTGGCGCGGCATTCCGACGCGCGAATTCCGCAAGTATGGAACTGTGTGGGGGAGCCCTGATAAAAAGGGTGTTTTACCACAACGTGCATTAATGTTTTTTTCACACAATTTTATTTTTAGTCTGAAAAAAATTGAACGTGTCTGTGCCGACTAGAGCGCAGAAAAATACTCATAAATCTGATTTTATCGGGGATGTCACGGGAGGAATTCGGTTCGCTACAAGATCTTGCAGCACCTATATCCCACCACGCATGTCTACCGGTCGCCAGCCGGAGGTAAGCACGCTT # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAAGAGGGCTTAGCCGAAGGGCTGTTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 118527-118206 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGB01000006.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 118526 36 97.2 35 ...................................C GTTCTGATTTGGCACAAGCTACTACTTGACTATCA 118455 36 100.0 35 .................................... TACAGTGGTTTTTACTGGCGGGGCACGACTCATGG 118384 36 100.0 36 .................................... AACTTCCGACAGTGCATCAGTATGTGCCTTCTGGGA 118312 36 100.0 35 .................................... TCAGGGGTAGAAATATCAATAACTTCATAATCATT 118241 36 97.2 0 .......G............................ | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 98.9 36 GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGACT # Left flank : TCTGGCGTGTTTTGATATTGAAGACGATAAAAACCGGCGAAAACTCGGGCATTTATTCTTGCACTACGGGCAGCGGGTACAATATTCCGTGTTTGAGATTAGCCTGAAAGACGAGCGGCAGCTGGACCGGTTAAGGGCGCAGTGCCAGCGGTACATTGCGCCAGGCGATAGCCTGTATTTTTACTGGATTACCCAGCAGGGCGCGGCAAAAAGTAAGGATGTGGATGGCCATCCCATTGCCCAGTACCCCGCGGTTATTGTGTTGTAATAAGCCGCCACATCAAACCTTGGCGCTAGTTGTAACATTTTGGTTAACGGCTTGAAAAATAACGTTTTTTTACCCACAACCCCGAGGAGGTTTGATTATTCAATGAAATCAACAGGTTGCAACGCCTACGACCGCCAAATCACGGCTCAAAGGCACCCAAACCGGAAACGCTGGCGGAGGTTTGACAAAAACCACGCTAAGCACCTGATTATAAAAGGCTTATTTGAGTACT # Right flank : TTTGACAGGTTGGAGATGCGCACACAATCATCATGTCCCGTAGTGGATCGAATGGGTGCGAGTCAGAAAATACTGTGACAAATGAAGGAATATTCAATCAATGTATCAGTTAATGATGGGCACTGTTATAGGCATGTTGTTGTCTGGCCTTGCAATCGCAGCCGATGATAAAACAACACCGCATAAGACGAGCTGTGTACAGGCACCTTGTGCGCCCGCGCAAGTTAATGAACATTACGAAAAAATGGTTGATAGGATAGTTAACGAGCGGCAGCGTCTTGACAGTGCCTCCGAGCGGCAATTTCAGACTGTAAAAGCGTTGTTTGAAACCAATAATGAATCGGTGCTATGGCTAATTGATAAAGCCATCTGGGTGTTTTCTGCACTGTTTTCAGTGTTGTTCATCGCTGCCAGTGTGATTTTTACCTACTTTTTTGGAAATACCCGAAAAGAGTTTCGAAAACTTGTAGAAGAGCAGCAGCAGGCGCTGAAAAGCCAAT # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 1475-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGB01000074.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00069.69_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1474 28 100.0 32 ............................ TCTGATATTGTGAGGCTGTGGTGAATATACTG 1414 28 100.0 32 ............................ AGCAAGCTGAGGAAGAGGCGGAGGCGAAAGCA 1354 28 100.0 32 ............................ TGATGGTAGGCCGTACAGCAGGTCGTCCGTTG 1294 28 100.0 32 ............................ AGGTCGCGCATACTCACGAGCTCATCATAGCC 1234 28 100.0 32 ............................ AGGTTAAAACCGCTACAGCTAATTTGCAGGTA 1174 28 100.0 32 ............................ ACATAAAAATAATTGCAAAGCGCAGGCGTGCG 1114 28 100.0 32 ............................ ACCCGGAAATAAAAACCGGCGAGCTCGTTATA 1054 28 100.0 32 ............................ GCAGGGAGGTCTTGAAATACTGTTACATCAAT 994 28 100.0 32 ............................ AAGCGCGTCACAGAGTGCAATCAATTTTGTTA 934 28 100.0 32 ............................ TGGGCGGTCGTCTATGTCTACGTCAAACACTC 874 28 100.0 32 ............................ TGCCTTGCAACAGCAAATTCAATACCTCCTGT 814 28 100.0 32 ............................ ATGAACAAAACAGTTTTCCTCAAGATCCGCAG 754 28 100.0 32 ............................ TTTGTAAACCTGACATCCGGTACCGTCTACCA 694 28 100.0 32 ............................ TTCCAAGCCTGTCGTACAAATCTAACCTGGAC 634 28 100.0 32 ............................ ATATTCACCGGCAAGGCCGCGCTTGGAATGCG 574 28 100.0 32 ............................ ACATGTAAAGCATGGATCGCCTTTTCTCAGTA 514 28 100.0 32 ............................ TCCAGGGTAGAGTTTGGGTGGTCTCGTAAACA 454 28 100.0 32 ............................ ACCTAAAGCAAGGTCATCAGTCTCTACGAACC 394 28 100.0 32 ............................ AGATAGATGAGCACCTAGCGCTGGAGATTGCA 334 28 100.0 32 ............................ TGATTCAAAAGCGTATCAGAAGGCCGTGAAGC 274 28 100.0 33 ............................ CTCATCCCCGCCGGTGGCTTGGGAAAATGTCGA 213 28 100.0 32 ............................ TTGACACTAATTAATGTCGCCACAACCTCACC 153 28 100.0 32 ............................ AACTTAACTGAGCTACAGCTTGATGACGTATA 93 28 100.0 32 ............................ TGGATGTATCGATGTTTACCCATATAAACCAA 33 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : AGCACCTTGACAATGTTTTTT # Right flank : AATAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1315-26 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGB01000079.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00074.74_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1314 28 100.0 32 ............................ TGATGGTAGGCCGTACAGCAGGTCGTCCGTTG 1254 28 100.0 32 ............................ AGGTCGCGCATACTCACGAGCTCATCATAGCC 1194 28 100.0 32 ............................ AGGTTAAAACCGCTACAGCTAATTTGCAGGTA 1134 28 100.0 32 ............................ ACATAAAAATAATTGCAAAGCGCAGGCGTGCG 1074 28 100.0 32 ............................ ACCCGGAAATAAAAACCGGCGAGCTCGTTATA 1014 28 100.0 32 ............................ GCAGGGAGGTCTTGAAATACTGTTACATCAAT 954 28 100.0 32 ............................ AAGCGCGTCACAGAGTGCAATCAATTTTGTTA 894 28 100.0 32 ............................ TGGGCGGTCGTCTATGTCTACGTCAAACACTC 834 28 100.0 32 ............................ TGCCTTGCAACAGCAAATTCAATACCTCCTGT 774 28 100.0 32 ............................ ATGAACAAAACAGTTTTCCTCAAGATCCGCAG 714 28 100.0 32 ............................ TTTGTAAACCTGACATCCGGTACCGTCTACCA 654 28 100.0 32 ............................ TTCCAAGCCTGTCGTACAAATCTAACCTGGAC 594 28 100.0 32 ............................ ATATTCACCGGCAAGGCCGCGCTTGGAATGCG 534 28 100.0 32 ............................ ACATGTAAAGCATGGATCGCCTTTTCTCAGTA 474 28 100.0 32 ............................ TCCAGGGTAGAGTTTGGGTGGTCTCGTAAACA 414 28 100.0 32 ............................ ACCTAAAGCAAGGTCATCAGTCTCTACGAACC 354 28 100.0 32 ............................ AGATAGATGAGCACCTAGCGCTGGAGATTGCA 294 28 100.0 32 ............................ TGATTCAAAAGCGTATCAGAAGGCCGTGAAGC 234 28 100.0 33 ............................ CTCATCCCCGCCGGTGGCTTGGGAAAATGTCGA 173 28 100.0 32 ............................ TTGACACTAATTAATGTCGCCACAACCTCACC 113 28 100.0 32 ............................ AACTTAACTGAGCTACAGCTTGATGACGTATA 53 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : AAGC # Right flank : ATGGATGTATCGATGTTTACCCATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [26.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14171-15458 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384577.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14171 28 100.0 32 ............................ AGCATATTTAACGCGTTTATTTCCGTTGGCGC 14231 28 100.0 32 ............................ TGACCGAAATCACAGCCGTTATCTGCGCTGAT 14291 28 100.0 32 ............................ CATATAAAGACGCCCCTTGCCGATAAGGGCTA 14351 28 100.0 32 ............................ TGACCGAAATCACAGCCGTTATCTGCGCTGAT 14411 28 100.0 32 ............................ CATATAAAGACGCCCCTTGCCGATAAGGGCTA 14471 28 100.0 32 ............................ TGCAAGCCGCGCATTATTTCTTGTCAGCGACT 14531 28 100.0 32 ............................ AGATGGTTGACGAAATAGAGGGGGAAAACGGT 14591 28 100.0 32 ............................ AGATGACATCGAGATTACTAATTTAACCAATA 14651 28 100.0 32 ............................ GCAGGCTATATTAACCGGTGTTTTCATAATTG 14711 28 100.0 32 ............................ ATATCGTCGATAATCTCCTGCTCAACGCCTGG 14771 28 100.0 32 ............................ ATGCATATAATGACGCCAGTTAAAAGTGCCCA 14831 28 100.0 32 ............................ AACATCGAGCGCAACACGCTTTGACTTTTTGT 14891 28 100.0 32 ............................ GTGAAGCTGCCAAGCAGGCTCTTAAGTTTGGC 14951 28 100.0 32 ............................ AATGACCCTGGTTACGACGTAATTGTATTGGC 15011 28 100.0 32 ............................ TTGCTTTAGGTGGCGACTCCCTGCACTTTACT 15071 28 100.0 32 ............................ AAGGATCGAATTGTTTGCAAGAACATCAACTC 15131 28 100.0 32 ............................ TCCCCGTACAGTTCGCCTACGCGGAGCATGCC 15191 28 100.0 32 ............................ AGTGCGATGGAGCAGCTGCTGCTGCCGCAGAA 15251 28 100.0 32 ............................ TTATGGAATTGGATGCCGCCCTCAAAGTGGTC 15311 28 100.0 32 ............................ CTCGTACATATTTATGACCTCTTATGTTTAGT 15371 28 100.0 32 ............................ AATCAGGACGAGCACCTTGACAATGTTTTTTG 15431 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 22 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : GAGGCATCACTGGAGCTTTTGGATACGCAAAAATGGCGTCAGGGCTTGCAGGACTACACCCTTGCAACGGAATTGCTACCAGTGCCCGCTAACGCTAAATTTCGCACAGTAAAACGGGTGCAAGCGAAAAGCGTTCACAACAAGCGCAAGCGCTCGGTGGCAAAAGGCTGGCTAACGGAAGTGCAAGCACAGGAAAAAATTCCCGATACTCAGTTCAAAGTTCTCAAACTCCCCTATGCCCAACTGAAAAGCCTCTCCAATGGCAATATCATGCGGGTGTACATACAGCACGGTGAACTACAGGAGTGTCCCGCCGTAGGCGAATTTAACAGCTACGGGTTAAGCCCCACAGCGACGATTCCCTGGTTCTAACCCTTTTTTTAGACCAAATCGTAACTCTTTGATTTATAAGGGGTTACGATTATCGCTAAAAAAAGGGTATTTTCCTCTGAAAATGGAAATGCTCTTTAACAACAAGGATTTAGGTGCTTCTAGCTCTA # Right flank : ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 16709-17356 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384577.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================== ================== 16709 28 100.0 32 ............................ TGGATGTATCGATGTTTACCCATATAAACCAA 16769 28 100.0 32 ............................ ATAACCCGAATTGCATCTAATGTTATTTGCGG 16829 28 100.0 32 ............................ GCCGATATATTTTGAATTAACCAGCATATTTA 16889 28 100.0 52 ............................ NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAG 16969 28 100.0 32 ............................ TTATCGCTCTTGATTGTTGTATCTTCCGTTTC 17029 28 100.0 32 ............................ GTGTAAAAGGTACGTTTGAACTGATTGAGGGA 17089 28 100.0 32 ............................ ACGCTTCCAAATCAGAACCCTAATGGCCTGCG 17149 28 100.0 32 ............................ ACCAGTAGATGCTTGACTCGTTAATACTACCA 17209 28 100.0 32 ............................ TCAAAGACGACCCAGAACAAGACCGGTATCAA 17269 28 100.0 32 ............................ ATGAACAGGCTTACATATGTTCGGTGTTTAAT 17329 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================================== ================== 11 28 100.0 34 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA # Right flank : AATCCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGTTCGCTGCCGCACAGGCAGCTAAGAAAATCCTGATGCGCATGCAGCTCATCCATCAAACGTTCGCTGCCGCACAGGCAGCTAAGAAAATAGGTCCCAGTCAAAATCGCAATGATCATCTGTTCGCTGCCGCACAGGCAGCTAAGAAACTCTCCACCCATTAAATTGTTAAAACTCTGGAGTTCGCTGCCGCACAGGCAGCTAAGAAATTTTAAGCCTTTTTCTTTTATAAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [3.3-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 18568-23879 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384577.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18568 28 100.0 32 ............................ GTGTTCATACCCTATGATGCGGCTAGGCGTAT 18628 28 100.0 32 ............................ GCTGGCAAATTGAGCATAGGGCAAGATTTTTA 18688 28 100.0 32 ............................ CGAACGAGCGAGGCCGCCTGTCGCCGCTGCAA 18748 28 100.0 32 ............................ ATCTGTTCCGCAAACAGGTATTGGCGTTCTAT 18808 28 100.0 32 ............................ GCAATGCTTAACCCACAGCTCGCCCCATTTTT 18868 28 100.0 32 ............................ TGCGCATCGCCGCTAAGAATTTCTTGCGTGAC 18928 28 100.0 32 ............................ TGGTGATCGAAAAAATTCGAGACGTTACCCAG 18988 28 100.0 32 ............................ CGGGTGGCACTGGCCGAACACGGGCTCCAAGA 19048 28 100.0 32 ............................ TTAGCCTCTAACTTTAACTCCTCTAGCGCACC 19108 28 100.0 32 ............................ AAATAGCAGATCATTTCAAGCGCGGCACTGTG 19168 28 100.0 32 ............................ TCAGTCTTGCTAAAGCTGTAGAAAAGCGCAAG 19228 28 100.0 32 ............................ ACTGTACCGGCTGCAACAGGCGGCACGATTTC 19288 28 100.0 32 ............................ TATTTGGTCGGCTACGAGTCGCCAAGTGTCGT 19348 28 100.0 32 ............................ TTGGTGTTACGGGTAGCATTGCGCGGCGTACA 19408 28 100.0 32 ............................ ACCGTTTCGGCGGCAGAGCTGGTGATCTTCAG 19468 28 100.0 32 ............................ TGACAGCGCGAACAGCTACCAGCAAACGCCAA 19528 28 100.0 32 ............................ ATACAAAACCACTACCCTTCCTTAAACCCTCT 19588 28 100.0 32 ............................ CGTAGCATATTGCACAATGTCATCTAGTGCAA 19648 28 100.0 32 ............................ ATACAAAACCACTACCCTTCCTTAAACCCTCT 19708 28 100.0 32 ............................ CGTAGCATATTGCACAATGTCATCTAGTGCAA 19768 28 100.0 33 ............................ GGGTGGGGCTGGTCAGGCTGGCGCTCCAAAATC 19829 28 100.0 32 ............................ CTGCTCTCCCTCCAGCGCCTGATTTGCTCTAA 19889 28 100.0 32 ............................ TCAACGATAAACACTTTGTCACCGTCGTTTAT 19949 28 100.0 32 ............................ TGGCCGTGAAATACCGGTAACAATTGATTCCT 20009 28 100.0 32 ............................ TAAGAAAATCCTGAATACTGGTACAACTGCAA 20069 28 96.4 32 ...........T................ AGCTGCCGGACTATGACAAAATCATACCTTGC 20129 28 100.0 32 ............................ ATGTCTCCACAGCATGTGTCTATTGCGCTGTA 20189 28 100.0 33 ............................ CCATCCAATTGACTGCATATACCTGCTCTCCCT 20250 28 100.0 32 ............................ TTTAGTGTTGGCTCAGACTGGCAACACAGAAC 20310 28 100.0 32 ............................ CAGTCATTCTAAATGTTAGTTTTGCCTTGTCT 20370 28 100.0 32 ............................ GACATTAAATTTACACAACCCATCAGCGGCAG 20430 28 100.0 32 ............................ TTTAGTGCCTGCTCTGTAAACTCGTAAAAACC 20490 28 100.0 32 ............................ TAGTGCGCGTTGGCAGGTCGGGGATTATGTCA 20550 28 100.0 32 ............................ CGGAAAACCCAACAAACCCTAATGCACGTTGG 20610 28 100.0 32 ............................ AGCCTGTTTGACCGACTCAAAGGTATGCAGAA 20670 28 100.0 32 ............................ GTTAACGTGAGGTAATACTAAATACAGGTTGA 20730 28 100.0 32 ............................ AGTAAAGTGAGGTAATACTAAATACAGGTTGA 20790 28 100.0 32 ............................ AGAAAACGCGGGCGGTTTTGGCGATACAGAAA 20850 28 100.0 32 ............................ GTGGAGCTATCCAGCATTTCCCACAATCTGAC 20910 28 100.0 32 ............................ GATTGGGGCTTGGTAGTCGTCGCTAGCAAAAT 20970 28 100.0 32 ............................ TTGATGAAATAACGGTTTTCAGATACCGCTTT 21030 28 100.0 32 ............................ ATTCAGACTGTCATCAAAGATGCGCTGGATAT 21090 28 100.0 32 ............................ ATCCAGTATTGACCAAACCCCTTGCGCCCACA 21150 28 100.0 32 ............................ AGCTGCGGGTCGTAATCGTAGTATACGTCGTC 21210 28 100.0 32 ............................ AGCAATTGCGTGCACAGCATAAGATTTGGGAT 21270 28 100.0 32 ............................ GCTAACCACAATATTACTTAACGTATTAGCGG 21330 28 100.0 32 ............................ AGCCCACTTAACGCCAGCGCATTAGCACCAAC 21390 28 100.0 32 ............................ GTACGGGCTGATTCGCCGCATGATCCCCGCGC 21450 28 100.0 32 ............................ AATTTAACAAAACAGCCATTTAGGGGGCTCTA 21510 28 100.0 32 ............................ TCAGGAGAGGCGCCAATGATAGCGGCCTCTAG 21570 28 100.0 32 ............................ AGTACCTTCGACGCTGCGGGGGTGTAACTCTG 21630 28 100.0 32 ............................ CTGGGCTGCCTCAAGCGGGCACAGAAACGCCG 21690 28 100.0 32 ............................ GACTTAAAACCCGGCCAAACACTCACCCGCAA 21750 28 96.4 32 A........................... AGCGGGATAAATCGACGCGATCTGTCCGTACT 21810 28 100.0 32 ............................ AGTGACGTCAATAGTTGGCGTTGTATCCATAA 21870 28 100.0 32 ............................ GACTGCCCGGTTGATGGGGCGGTGCATCAAAC 21930 28 100.0 32 ............................ CGGCCTGCACGGAATGAAGCGAAGCGGAGTGT 21990 28 100.0 32 ............................ GTAGAGTTCGCGGATATCTTCGAGCAATCCAG 22050 28 100.0 32 ............................ CATAATAATTCGCTCATCGCCCAAGTCGATTC 22110 28 100.0 32 ............................ TCAAGGGCCATCAAGCCCAGGTCGTCGACCTC 22170 28 100.0 32 ............................ GTCCTCTTGATAGGAATTTATCTCTATTTCAA 22230 28 100.0 32 ............................ CAGTGCTAACAACATGCACTAACCGCCCCTTA 22290 28 100.0 32 ............................ GCCCGGTTCTATCTCGCATTCACACAAACGGA 22350 28 100.0 32 ............................ TTCATTCCCGCTGCTGGCATGCGGAAGAAATT 22410 28 100.0 32 ............................ GCCAGTGCCGGTACATATTGCGAGCGCTAGCG 22470 28 100.0 32 ............................ AATATGATTGCCCCGAAACCACGAATAACTAA 22530 28 100.0 33 ............................ CGCGTTAAGCAGGGCCTACAGGATGAAATGATC 22591 28 100.0 32 ............................ ATAGGGGGGCCGGAGTCCGGCACAATTATTAA 22651 28 100.0 32 ............................ AACGCAATAACCGGGTTTTGTGGTTTTGTGCT 22711 28 100.0 32 ............................ CGCCACTCTTCTGACCATTCACGAAATTCGAT 22771 28 100.0 32 ............................ TGCGGGCACGTCCAATATCCCAGTAACTCATT 22831 28 100.0 32 ............................ TATCACCCGAGCACCTTCACGAAGCCACAAGC 22891 28 100.0 32 ............................ GGTGATTATGGCTTTTTAAATCGTCATGATGG 22951 28 100.0 32 ............................ TCGCTCATGGCCCAGGGCTTCGCCACGGTGTA 23011 28 100.0 32 ............................ AAACCCGTTTGTACCGTACGTGACTATAGGAT 23071 28 100.0 32 ............................ TTTTGTGATAGCGCTTCAAAAACCTTTTTCAG 23131 28 100.0 32 ............................ TGGAACGAAAACAACAAAGGGCCGAAAAATGG 23191 28 100.0 32 ............................ ATTTTCAGTGAACATATCTATGGTTCTTAAAC 23251 28 96.4 32 A........................... TAATGAGCTTGATGAATATCGGAATGCATGAA 23311 28 100.0 32 ............................ ACATCAGCGGGACAGTCTTACACATACTCCCA 23371 28 100.0 32 ............................ GTCAGATTGCCGATGTGTGCATTCGTGATCCA 23431 28 100.0 32 ............................ CGCAGTGGGGGCATTGGCGATATATAACCGCT 23491 28 100.0 33 ............................ TCTCTGCAGAGAGTGGTTAGTTTAAGACCTTCT 23552 28 100.0 32 ............................ TTAGCCATACCCTGCGCCGTACTCACTACTGC 23612 28 100.0 32 ............................ GTTAAGAAAGGTGGCAATCAGAAGGTGACGTT 23672 28 100.0 32 ............................ ATATTCATTCAAAAAACTGCCTGCGTATTGAG 23732 28 100.0 32 ............................ CGCTCATACCCATCATCGCCACGCCTTTAGCT 23792 28 96.4 32 ....................T....... GTGCGCGACTACTGCGCAAAAGGGCGGTTGCC 23852 28 96.4 0 ...........................T | ========== ====== ====== ====== ============================ ================================= ================== 89 28 99.8 32 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : AAAAGTTAGATAGCCAGCCAAAAAATTTAGTTAAAGTTCGCTGCCGCACAGGCAGCTAAGAAATTCATCTCCTCCTGTAGCCTGGGAAAACGTCGGTTCGCTGCCGCACAGGCAGCTAAGAAATGTTGGCGATCCCACGCTATGGGAGTCTCCAGGTTCGCTGCCGCACAGGCAGCTAAGAAATATTGTAAGCATTGTAAACAGTGCCGCTGGTCGTTCGCTGCCGCACAGGCAGCTAAGAAATATTCCGCCGGCGCATTTTTCGTGTAGATCCAGTTCGCTGCCGCACAGGCAGCTAAGAAATCGCTCGTTCGCACCGGGACAAATGCGGTTAGGTTCGCTGCCGCACAGGCAGCTAAGAAAATTGCCGAGGCAGATAACGAGCTAAAGCGTCAGTTCGCTGCCGCACAGGCAGCTAAGAAANNNNNNNNNNCGGTTAGGTTCGCTGCCGCACAGGCAGCTAAGAAAATTGCCGAGGCAGATAACGAGCTAAAGCGTCA # Right flank : TTGATCAATTATATTTTGTAGTGAAGGAATTCTTGTAGTTTTTTACTTGGTGGCCAGGGCTTCCTAAACATAATCTTGGCATTGCTATGTTGTAGATCTTCAACTATGTGAACTACTTAATCAACAACCGAAACCGGAGCGCCGCCCATTTCCATTGTTAAATACTTTGGCCTGTACTGCGGGTTTTGGCGCGCTCACCTCAACACGGTATAAATCCACAAAAATAAAAACCCCGCTGGCTCATGCTTGATGTAGCCAGCGGGGTTTTTTATTGCCCGGTGCCCGCGCTTACATTCGCGTGATTTTAATCATCATCGGGTATTGGTCGAAGCGGTGCGCCTGGTTGAGGGTGGAATCGGCGTAGCCGTCTGCGGAGGTGACTACACCGGGGTGCATGGTGACCTGGTCCATAATGTCGTCTCGCATTTCATTAAACCCTTCGCCACCACCAGCGGGCCCGGGAACGGTTTCCGCGGTTTCGGTATTGGCTTCGGTGCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //