Array 1 81419-81915 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVCB010000005.1 Thalassolituus sp. ST750PaO-4 NODE_21_length_778202_cov_356.443298, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 81419 32 96.9 34 ..............A................. CAACGTGTTACAAATACAGATGAGGCAACGAATC 81485 32 100.0 34 ................................ AGACTGTGCTGGCGACTGGCACAAAGCAGCAAGA 81551 32 100.0 35 ................................ TTTTTGCGCTTAGTCATACCGTCCTCACCTATCCG 81618 32 100.0 35 ................................ CAATAAAAGCCAGCTCGCCGTTAAAGTAAACTCGC 81685 32 100.0 35 ................................ AGAGAATGATGCATCAGAGAGTGGGGCTACGTACA 81752 32 100.0 34 ................................ TGCAACGACTGGCTCGAACACGAATACCACACGC 81818 32 93.8 34 ..............A....T............ ATTGCACCCGCGACAACAAAGGCGCGATCATGGG 81884 32 87.5 0 ........AC..........A.A......... | ========== ====== ====== ====== ================================ =================================== ================== 8 32 97.3 35 GTCGCGTCCTTCACGGGCGCGCGGATCGAAAC # Left flank : TGGCGGCCCAGGAATAAAAGAAGGTATGGAGTTGTTACGCGGCTCCCAACAGGCAATTCATGACCGTGAGACCTTCTTTAAATTGCAGATATTGTTCTGGATGCTGGCGGCTATTGATGGCCACGCCAAAAACTTCAGCCTCTTCATTGAACCGGAATCCACTTTCCGCATGACGCCGATTTACGATGTGCTCTCTGCCTATCCGCTGATGCGGGCAAATTCGCTGCCTGCTGCCAAGGCCAAAATGGCCATGTCGGTGAAAGGAAAAAGCCGGCATTACCATTGGCAACGTATCGAACCGCGCCATTTTATGAGCACCGCCAAAGCGGTGGGTTTTTCGGTACAGAGAGCACAGCAGTTATTAATAGAGTTGGCGGAGAGTACTACAGCTGTTATCAGCAGGGTTGAGATGCTTTTGCCACATGATTTTCCGGAAGTAATCGCGGACTCCATCTTTAACGGACTGCAGGAGCGTGCTGATTTTATTCGTGAGGTGTAAG # Right flank : CGGGAATGATGTCGCGTTCTTCGCGGGTATTTAGATGGCGTCTTTGCTGCCACAAAGATCTAAGACCTAAGCATCGGCAGTTAACTTAGCTGAGGCGTGGTGGCTATCCCAGATGTCGATAACATCAACACCATTTATGAACAGCGGTCTCCTGAGACAATCTCCAGATACACTGCTTGCATATTGCTCTGACAACGATTATCTGAACTACGATACCAAATGAAACTTTAAAATGTGGCCAAATCAAGACAGCTATCAAAATTAACAGCAATTAGAAAACTGGATTTTTAACGTGGGCACAAAATGTGCCACATTTTGGACACAAGAGGGATTTTGTTAGTAATTACTATTGCCAGAACGGCTTAGGAAGTGGCCCGCCCGAGAGGATTCGAACCTCTGACCTCTGCCTCCGGAGGGCAGCGCTCTATCCAGCTGAGCTACGGGCGGTTTACGTATGAGCAACTTGAGGCTCAGGTCGTAAGTGCCCGCATTGTATACGT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTTCACGGGCGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTTCACGGGCGCGCGGATAGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 514501-516270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVCB010000007.1 Thalassolituus sp. ST750PaO-4 NODE_28_length_824796_cov_336.745117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 514501 28 96.4 33 .............T.............. ATCGGCAAGACTGCGCCGCTGAGCGCGATTCAA 514562 28 100.0 32 ............................ ATTCTTCAGCATGAGATTTCAGAAAAACTTAC 514622 28 100.0 33 ............................ TTCATTTTCCCGCGCAGGTGCTGCAGGTCTCCC 514683 28 100.0 32 ............................ ACGCATTGCGATATACACAACCGCAACAGCAG 514743 28 100.0 32 ............................ CAGCGGGCTGCTGCTTGCCATGCTTTCCAAAT 514803 28 100.0 32 ............................ CATCACAGTACATGCCGGGATCAGATCCGGCC 514863 28 100.0 32 ............................ GATCTGGCCCTGCAAGCAATACACATTCACGA 514923 28 100.0 32 ............................ GTATTGCAAAAGCCCATTTGACTTGACTCTCA 514983 28 100.0 32 ............................ TTGAGCAGTTTGAATCTATTGTCGATTTAACC 515043 28 100.0 32 ............................ CGGCAGCGGGAATTTCTGGCGCAGTTCGGCGA 515103 28 100.0 32 ............................ TGATCGATCCGGGCGAAACATCGGTAACTGTT 515163 28 100.0 32 ............................ TGTCCTTCCTTGGGGTAGCCGAGTGGCTATAG 515223 28 100.0 32 ............................ AGCTGGGATAAGCGTGTGTGTGCCGGGTCAAT 515283 28 100.0 32 ............................ TATCTTGAAGCTGGGCAGATCGCACAATCCAT 515343 28 100.0 32 ............................ TGATAAACCAGATAGGGCAGAACGCAGTCTGA 515403 28 100.0 32 ............................ CCATCTGGCAGAAACTGATGGAAGACGTGAGC 515463 28 100.0 32 ............................ ATCAAGGGGGGATTGCTCTGCTATTAGGTCAT 515523 28 100.0 32 ............................ GCTACCAATGCCAGAAAGCTCCATAATTTTAC 515583 28 100.0 32 ............................ GATACGAGGGCATTGATGTCCGGCCGGTAGTT 515643 28 100.0 32 ............................ TGCAGAAAAATTTGAGCCGCATTAATGCATTT 515703 28 96.4 32 .............T.............. ATCCAGCCCTAAAGATCCCATAATGACAGATG 515763 28 96.4 32 .............T.............. CCCAGAAAACGAAAAAAGCTAGTAGATACTTA 515823 28 96.4 32 .............T.............. CATCATCAGGATCACTTCGCAGATTGCGCGGA 515883 28 100.0 32 ............................ ATCAGTGGGTCGATGTCTTCAAGCACCATAGA 515943 28 100.0 32 ............................ AGCGGCTGAGTGATGCGGGTGATGTATTCCCT 516003 28 100.0 32 ............................ CTTGCAGATCGCAACCGGGTCAACGTCCCATA 516063 28 100.0 32 ............................ ACCGTCGATTAATTCTTGTCCACTAATGGATA 516123 28 100.0 32 ............................ TGATGTTCGTAAATGGCATCGGCGGTGGGGAT 516183 28 100.0 32 ............................ AATCGGAACGGTAAAAAGCATTAAACGACAGG 516243 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.5 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GCAGCCTGCATAGCCTGATGCAGGACGACTGGCTGAAAGGGATGCGCGACCATGTACGCATGACCGCGATTCTCCCGGCACCAGACGATGCTGCTTACTGTGTATTCCGGCGTAAACAATTCAAAACCAGCGCCGAACGACTGCGCCGGCGGCGTATGAAGCGCAAAGGAGAAACGTCGGATCAGGCGGCCGAGGCCATTCCTGTCACCATAGAGCGTAAGCCCGATTTACCCTATGTGCATTTACGCAGCCACAGCACGGCTCAGCCGTTCTGTCTGTTTATTGCACGCGGGCCGCGACAGGAAAAACCCGGGCAGGGGGATTTTAACCGTTACGGGTTAAGCCAGCATGCAACGGTACCGTGGTTCTGACCCTTTTTCTTTGGGTTTTTAATTGGCTTTAAAAATCAAAGGGTTAACCCGTATCCCCAAAAAAAGGGGGATGCGGGCTTTCTCTGTAAAGTTCTTTAACAATCAGGGTGTTAGAAAGAATAAGCTCTA # Right flank : AGTTACCCTGCAACAAGCTCAGGGCGGACGGTGGAAAACTCAGGGATGTTTGTTCTGAACCCCAGAACGAAAAAGCCCGCGAAGTAGTTGCATACTTCGCGGGCTTTAGAATTCGTGGTAGCTATGACTGGACTTGAACCAGTGACCCCAGCATTATGAAAAAACTATGCGGAGTTAGTATTTTTCCTAACTCATTGATTTTAAAGAGTGTTCTTTCTTCTCTGTTTGACTGAAAAGCACATAAAAACACGGAAAAGCATAGTAAAACACGGTTTACGGCTACATTTTTTATTGGTCGTTGTAGTAAATTTCCCCATCTGGAAATACGATTACCGTAGATGGATACCAGCCTCTTGTGTTTCTTTTATTTGTAGCCTTTACTCTGTCTTGTATTATCTCGTAAGTGCCTGATTTGTTTGGGATGAAGTATGTGAATACAGTTGTTCCACCTTCTGTTTTTGTATTGCATCTTATTTTTCTGTTCAGCGTGAATTTGTTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //