Array 1 302332-300316 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWDN01000004.1 Flavobacterium circumlabens strain CCM 8828 NODE_4_length_424442_cov_14.482854, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 302331 36 100.0 31 .................................... CTTTTAATTTTGTCAAACATTCTACTGTTCT 302264 36 100.0 30 .................................... TTCTTCCAAAAACAAGGATATACTTTGAAG 302198 36 100.0 30 .................................... TCGGGCAAACAGAGTATTATCTGTACAAAG 302132 36 100.0 30 .................................... TTCGCAATTAAAAAGAGGCAGGGGTGATTA 302066 36 100.0 30 .................................... TCAAAATTGCAACTTCCGTTGTTTGGTGTA 302000 36 100.0 30 .................................... GAAAGAATTCAATCTGTTTTAAACATTATG 301934 36 100.0 30 .................................... AAGCTAAACGAACCGATTCCGGATCGCCTG 301868 36 100.0 30 .................................... GATTTGTCTCTGCCCTTCAATCCAACCCAT 301802 36 100.0 30 .................................... AAACATCAATGGTATTGACGTTGTTGTAAT 301736 36 100.0 30 .................................... GATATTGGTACGGTTCCCGATATTGGTACG 301670 36 100.0 30 .................................... CCTGAACAGGTGTAAATGATATCTCAGTAG 301604 36 100.0 30 .................................... ACATGCACCTCTGCCGATAAGTGTTTTAAA 301538 36 100.0 30 .................................... AACAAGTTGCTTTTGTTTCCCCGTGTCCAA 301472 36 100.0 30 .................................... ACTTACTGCATATAAGCTAGAGATAAACGG 301406 36 100.0 30 .................................... TGTTCTTGCGTTTATTTCTTCAGCCTCATC 301340 36 100.0 30 .................................... TATATTCCAACTGCTCACCGTATTCTATAG 301274 36 100.0 30 .................................... TTAAGAACAAAATCAATTCATGTGCAGTCA 301208 36 100.0 30 .................................... TTCGAGTATCGATAGTTTCCGGAATGTTGG 301142 36 100.0 30 .................................... TAAAGTATAAAATTCCATTAACTTTAATTT 301076 36 100.0 30 .................................... TTATTTTTGGAATAGAAATGTGACGGTAAG 301010 36 100.0 30 .................................... TTTCCACCCTTTCAAAATTCTACCAAGTAT 300944 36 100.0 30 .................................... TTAAGGGCTACCCCTACAGCAATAGCCGCA 300878 36 100.0 29 .................................... GATCCGACAGGTGGATTAATTGCCCCGCT 300813 36 100.0 30 .................................... GTCGGGCCACGTTGACGATACAACACGTTT 300747 36 100.0 30 .................................... TCTTCTTACCTTTTCGTACTCTGATGCCTT 300681 36 100.0 30 .................................... ATGCGATTAAGGGCTTAGCACGAGAGCACT 300615 36 100.0 30 .................................... TTAAATCTGTAACCGAAGCGTTAGAGCTTA 300549 36 100.0 30 .................................... GCTATTGCAAAACGCCTATAACAAGTCGTT 300483 36 100.0 30 .................................... GCTGTAGGTCTTACCAACGCCTGCAGCGCC 300417 36 100.0 30 .................................... CCGATTAGCGTAAGGACCAAATCAAACTTA 300351 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : GCAAGCTCGTTCACAAGATGAATATTATGAGTTTGTGAGGGCTAAAATAGATAAGGGAGAAAAAAGCGGTTTTGTGAAAAAACAAACTAGAGAAGAAATGTTAGCAGAATTCAAAAAAGGTCTGCCTAATGTATAGCTATTATTTAAGTAGCGAAGCCAAAGAAGATTTAAGAAGAATTTATTATTATGGGGTCGGTAAGTTTGGCGTTAATCAAGTGGATAACTATTTTAATATGTTATATGATTGTTTTGATAGGATAGAGGGAAATCCTTTTTTGTTTCCATCAGCCGACCACATAAAGAAAGGATATCGGTATTGTGTATGTGGTGTTGATACTATTTACTATCAAATCAATGGGAATAAAAGGATAGAGATTATTACCATTATTGGAAGACAAGATTTTGATAGTAGTTCTTTGACATAAGTAATTCAAATCTTAAACATCCAAACCACAACGGAAAGGTATGGCATTCGCCCAGCAGGAATGCAGTAGCTTTTA # Right flank : AGTTGGCTTGTTTCCTTCTGATATATAAGGATTTAGATGTGAATATCGTTCAGAAAAATGCCTCTTTTATGGTTTGATAACCCATAATTGTGGCATTTTTTCAATCGTAGGGTTTAGTAAATGAGGTTTTGGACATTGAAACGTTACTAATAATTAAATAGATTAGTACTAAAATAATTCTAGTTGCGTAGGTTGAGGTGCTGATGGTAAGGCTGCTTTTCCCCAAAAATTTAAGATATTACCAAATTGCTTATCGGTTATTCGAAGTACACTTACTTTTCCTAAAGGTGGTAGTAGTTTGTGGATTCTTTTTTCATGAACGTCGGCACTTTCACTACTTGCGCAGTGGCGTACATAAACAGAATATTGCATCATCGAAAATCCATCTTTTAATAAATTGTTTCTAAATCCAGATGCATTTCGTCTGTCTTTTTTTGTTTCTGTGGGGAGATCAAAAAAAACAAATAGCCACATTATTCGATATCCGTTAAGCTCCATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //