Array 1 97162-94634 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLWB01000118.1 Klebsiella pneumoniae strain K45-67 contig204, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 97161 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 97100 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 97038 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 96977 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 96916 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 96855 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 96794 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 96733 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 96672 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 96611 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 96550 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 96489 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 96428 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 96367 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 96306 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 96245 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 96184 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 96123 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 96062 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 96001 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 95940 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 95879 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 95818 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95757 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 95696 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95635 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95574 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95513 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95452 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 95391 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95330 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95269 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95208 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95147 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 95086 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 95025 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 94964 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94903 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94842 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94781 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94720 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 94662 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CACGATTCTGGGAAATT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1879-2029 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLWB01000233.1 Klebsiella pneumoniae strain K45-67 contig70, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1879 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1940 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 2001 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : ACAGGCTTACCCGTATTGAGACGGTTGCTGAAGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //