Array 1 117-1601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEK010000030.1 Flavobacterium psychrophilum strain 98753 contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 117 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 192 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 268 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 344 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 420 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 496 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 572 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 648 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 723 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 799 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 875 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 951 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1027 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1102 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1178 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1254 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1329 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1405 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1480 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1556 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 20 46 98.4 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 247-484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEK010000082.1 Flavobacterium psychrophilum strain 98753 contig00082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 247 31 96.8 38 ....C.......................... AATTCTGTGATTACTATTAATCGAGGTGCTTTTGGCGG 316 31 96.8 38 .......A....................... AATTCTGTGACTACTATTCGAGAGAATGCTTTTGCAGA 385 31 100.0 38 ............................... AATTCTGTGACTGATATTGAAAATGGTGCTTTTTTCAG 454 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 4 31 98.4 38 TTGTTCTGGTTTAACATCAGTTACAATTCCT # Left flank : AGCACAAGATTTTACAGCAAACGGCATAAAATATACCGTTACTTCTTCAAGAACTCCTTTTACTGTTAAGGTAGCTAGGAATGCTGGTTTTACTGGAGTTGCGGAAATACCAGAAATAGTAGCTTATAATTCAAAAAACTATATTGTGACTGCTATTGGAGAATCTGCTTTTATACAATGCAATAATTTAACATCGGTCACCATTCCTAATTCTGTGACTACTATTGGAGATTATGTTTTTGCAGAT # Right flank : | # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGTTCTGGTTTAACATCAGTTACAATTCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //