Array 1 411297-414443 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLWK01000037.1 Flavobacterium sp. TAB 87 contig000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 411297 46 82.6 29 A.........T...G...GG..A...............T..G.... TCATGCGTTGTGTATTACGATGCTAATGA TTT [411321] 411375 46 100.0 30 .............................................. AAAAACCCTCTATATTGCAAGTCTCCTAAT 411451 46 100.0 30 .............................................. TACATTTCTTACAATGAAACCTAGACCTGT 411527 46 100.0 29 .............................................. GAAGCTAGAGCAAAGGCTTTGGTTGATTC 411602 46 100.0 30 .............................................. TCACATAATCATTGTATGAATTACTGTCTG 411678 46 100.0 30 .............................................. CTGCTAGGTGCATCCATAATTTATAATGTA 411754 46 100.0 30 .............................................. TCACTTTCAATAAATACGCTTAGATTATAT 411830 46 100.0 30 .............................................. ATTAGCATCTATAATAGCTTTCGCCCACGC 411906 46 100.0 29 .............................................. CTTGGCAATTCATGTCAGCATGTTCGACG 411981 46 100.0 30 .............................................. GACAAAGTTTGTAGATGTAGAGTGCAGCGA 412057 46 100.0 29 .............................................. GATACAGAAAATAGACGTTTGCCAAAGTA 412132 46 100.0 29 .............................................. CACTTAAATAAGAACATCAATCAAAACAT 412207 46 100.0 30 .............................................. TAATGGAGCGAATGCAGGCTTCAGCTACTC 412283 46 100.0 29 .............................................. CCAAAGCTTAGATGGTGAATCAGGACCTG 412358 46 100.0 30 .............................................. AAAGCGCCAATGAAAGTAAGGGCGTTCAAT 412434 46 100.0 30 .............................................. CTAACTTTGCACCGCCATTGTTTATCGCAA 412510 46 100.0 30 .............................................. TTTTAGTCGTAGCGAAATAAGAAAGCTGGA 412586 46 100.0 29 .............................................. CATGATGCGCGCAGTAAATTATAAAATTT 412661 46 100.0 29 .............................................. CTTAAGTGTGAACTGATTTTAGCAGAACA 412736 46 100.0 30 .............................................. CTAACTTTGCACCGCCATTGTTTATCGAAA 412812 46 100.0 29 .............................................. CAAGTCCATTTCTAAACCAGTTAAAAGCA 412887 46 100.0 29 .............................................. ATACGTATCGTGTTGCATTGTACGGATAA 412962 46 100.0 28 .............................................. CGGTAAAAGGCGCTTCGACTTTGGGTGT 413036 46 100.0 30 .............................................. TAAAATGTTTGCAGACTCGATGGCTCTGGA 413112 46 100.0 30 .............................................. AAAAGTCAATTTAAAAAACACGGAATTATA 413188 46 100.0 30 .............................................. AAAGTTCAGTTTCGGCCTTGGATTCTTAGG 413264 46 100.0 29 .............................................. CCCTCCGCAAAAGGGACAGTATTGGTGTG 413339 46 100.0 29 .............................................. TATTGCGTTATCTTTTTTTCCAGCCCTAG 413414 46 100.0 30 .............................................. TGAAAAAGAGTTCTTAGCTATGTTAGATAA 413490 46 100.0 29 .............................................. TATTAAAATTTTAACCTCACCGACTTCCA 413565 46 100.0 30 .............................................. TAATGATTTTCTAAATGATTTTAACTGCTC 413641 46 100.0 30 .............................................. AACCAACAATAGGATTTACAGACGAAATAG 413717 46 100.0 30 .............................................. AAAACACGACTACCCGTATTACTTGACGCT 413793 46 100.0 29 .............................................. CTTTGGAATAAATTACTATTGCGTAATAA 413868 46 100.0 29 .............................................. ATATTCAAATAACACTTCAACAGGTACTG 413943 46 100.0 30 .............................................. CTTTATTGTTTGCGGCTAACAGTGGTTTTA 414019 46 100.0 30 .............................................. AAAATACCTAAAAACGAAAAGGTAATTGAG 414095 46 100.0 30 .............................................. TTTCTGTAATAGGAAAACCTAACCAAACAG 414171 46 100.0 30 .............................................. TGGTATTGCAGATTTAATTTATGATACTAA 414247 46 100.0 30 .............................................. TCCTTACGGTATTACTATTGATGCATCAGG 414323 46 100.0 29 .............................................. GTAGTATCTCCAATCACTTTAATTTTCCC 414398 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 42 46 99.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAACTCCCAAC # Left flank : AGAGTGAGAATGTTTTTGTAAAAAGTGAAGAAAGTTTAAAACTGGAAGAAACCCCTAAAGAAGTTCGGGAGTCACGAAGTGTAGGTCTTACGTCAAAAGAAGACTTAATAAATAAAGAACCTAAGATAATAAAACCAAATACATGGTTTGTAATTGGAATTATTATTTTGCTATCAGGTCTATGCTACTATTTTTCACAAAAAAAAGAATGTATGCAATGGTCTAATGATCATTATGAAGAAGTTAGCTGTGATTTAAAAGTGGAAAGTATCGGAGCTTTTAATAAAATTGAGCCTTCAGATAAGAGTGTTTTAATTCTCAAAAAAATTAAAGTTACAAATAAAACCGTTTTTTTTAAGGATGGAGAAGCTATAGTTTGGTATGCTAAAACAGCACACGGGATTGAATTTTTTAATACCCATGGTAGGCATCCTGAGAATGGGCGTGCTTTGAAACCTGTTAGCGATTATATCATTAAAAAATACGTAAACAATTAACTA # Right flank : CATACCGCTAGTTAATTGTTTGATATGTTGGTAGTTATAGGTTTGTTTTGAAAGTGAAAAATAAATGAATTGGGGTACTGATGCACAGGTTAGTAGGTGTTTTTTTTATCCTGTTTTTTAAAAAAGCTCTAATTGTTGCGATGGCTTTTCGGTTTCTACAGGTTTTTTTCCATAAAAGAGTTCCATCATTCCAAATTGTTTATCTGTGATTTGCATCACACCAATTTTTCCATGTTCGGGTAAACTATTTTTAATCCTTTTGGTATGTACTTCTGCATTTTCTCTGCTGGCGCAGAAGCGCATATATATCGAAAATTGGAACATAGAAAAGCCATCGTCTAATAATCTCTTACGAAAAGTACTAGCAATTTTACGCTCTTTACGCGTCTCGGTTGGTAGATCAAAAAATACTAATATCCACAAACTCCTATATTGATTTAAACGTGTGTAATGTACATCATACATAAATTGGGTATAAAATTCTTCGAGAACTTCCCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAACTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.60,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //