Array 1 840840-844503 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008874.1 Halanaeroarchaeum sulfurireducens strain HSR2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 840840 30 100.0 36 .............................. ACCAACACCTGGACGTCCTGATTGAGTGGAAAAATA 840906 30 100.0 35 .............................. CCATGCCGGATTGTTCATTATCCACCACTGCCCTA 840971 30 100.0 33 .............................. GTTCAACAGCGATGGAACGAAGGGACGCATCCG 841034 30 100.0 36 .............................. GGTTTCAGAAAATGGCTCCTATCTAGCTCAATGCGG 841100 30 100.0 37 .............................. ACGGTGCGTGCGGTCTGGAATGAGGTACTATTTGCAG 841167 30 100.0 36 .............................. AGCCCAAACATATCGAGGATGCATGAAAAATCGGCG 841233 30 100.0 36 .............................. GTCCGGTACGCGGATACCCGAGCAAAGAACCGGGCG 841299 30 100.0 42 .............................. CTGACGCACCTCGGGGATAAGGTCCCGGACGGTCGAAGCCGA 841371 30 100.0 36 .............................. AGGTGATCGTACTTGACCTCGTGTTCGTCGGAGCAG 841437 30 100.0 35 .............................. CTTTGATGACGTTCACGTACTCGTCGTTCTTGTCC 841502 30 100.0 35 .............................. ACGTCATCCGACCACGGGGACGCCTCGCGGTCCCC 841567 30 100.0 37 .............................. CGCGTTCTCACCCGTGCCAACCGCAAGATTTTTGGCG 841634 30 100.0 37 .............................. CAACTCTTGCTCCAACTCCAACTCTTGATCCAACCGC 841701 30 100.0 36 .............................. ACCACGCGTTAGCCTAACGGTCATAATGCCTGCAGG 841767 30 100.0 36 .............................. TCGGGGTACAGCCGCCGCAGCGCTGTCTCCGAGTAG 841833 30 100.0 37 .............................. GAGGACGAGGGAGAGACGTACAACTGCGGCGATTGTG 841900 30 100.0 36 .............................. GGCTGGCAAGCGCCCTACCAGGCCCAAGAGCGGTTC 841966 30 100.0 35 .............................. TTCACGCTCGCCGCCACCTGAGGAAATCTACGAAT 842031 30 100.0 37 .............................. CGCATTGTCTAGCATCCAGCAACAGCAGGCGGAGGAA 842098 30 100.0 36 .............................. ATACCAGATTATCAGGTTGTCAACGAAATCGGGCGC 842164 30 100.0 36 .............................. TGCGTCAGAACAGAAGGTCTACGATGGGTCGGTGTG 842230 30 100.0 37 .............................. CGACCCCGCACGACCACAATCTTACTTACTAACATGG 842297 30 100.0 35 .............................. GAGGGTGAGACGGTCGAGGTTCCGACGACCTTCGA 842362 30 100.0 36 .............................. CTTGAGCCGTTCCATCATCGGAATCACCCGAACCGC 842428 30 100.0 37 .............................. TTGGTCCCTTCGATCGTTCGCAACGTACTCGAACCTA 842495 30 100.0 36 .............................. CTGGTTTACGCCACCGTCGACGATCGGAGCATCCTC 842561 30 100.0 36 .............................. GGTCGGCGTCGTAGCCGAAGGCGATTATCTCCGTGC 842627 30 100.0 35 .............................. GGTCGCTTCGCGGGTCGTCGCTGACGGTCGTCGAC 842692 30 100.0 36 .............................. GCAGGGGGCGGAAACCTACCGCGAAAAGATTAGCGA 842758 30 100.0 39 .............................. GAAGCCGAGAGCGTCACGCCCGAAGCCGTCGTGGACGTG 842827 30 100.0 36 .............................. GTCAACGGGCACGATCGCGTAGCGGCCCGGCTCCGG 842893 30 100.0 37 .............................. ATCTATTTGCCTTTGTGAAACGGCGATTGCGGCCCCC 842960 30 100.0 37 .............................. TTTCGGCACGGCTTCATCATCGTTGGCCTCCACCATT 843027 30 100.0 35 .............................. CCCCATGAGGCGGCGGCCACGCCAAGATTGAATCC 843092 30 100.0 37 .............................. AGTTCAGCCCAAACCGTTCAAGCATTGACTACACGCG 843159 30 100.0 35 .............................. GGCTTGCCACGAATGCGGTGGTGAGGTTTTAGCGG 843224 30 100.0 37 .............................. CTGCAGCAAGCAGGTGTTGGCTTCGATGTTAAAGCGG 843291 30 100.0 37 .............................. GTCAGTCGGTCGCTGGTTGCCGTCGGACATTGCGTAT 843358 30 100.0 35 .............................. GAAATGACTGACGAACAACTCGCCCGCGACGACGA 843423 30 100.0 36 .............................. GCAATCAACTGGTGGTATCCCAATAAGCGAGCGTGG 843489 30 100.0 34 .............................. TTGGAGTGACGAAGGCCAAGACCCATTCGGCGGA 843553 30 100.0 38 .............................. CGCACCTGCGACCGCCGCTAGGGCGAGGATGGCGGTGT 843621 30 96.7 35 ...............C.............. GACGCATCGACATCCTGATCCGTGTTGTCGTCCGC 843686 30 100.0 38 .............................. GTATGAAATTTTACATCGCTGATTCGTCCGGTGATGTG 843754 30 100.0 35 .............................. TCCGTAAAACTGCACCGTAACGTTGATCGGCTCGG 843819 30 100.0 35 .............................. CTGAGACGCTTCACGGCCACCTTCACCCATTTAGA 843884 30 100.0 36 .............................. GCCAAGTCGGCGTGGTCCCCCGTCTCACCAACCGTC 843950 30 100.0 37 .............................. GCTGAAGGTTACGCTCAGGGAAAGGAGGATCATCATA 844017 30 100.0 36 .............................. TTGAGTCCATCCGCCGATGCATCGACTTCGTTATCG 844083 30 100.0 36 .............................. TGGATATGACCGTTACAGACGCCCGCGAGGTGCAAC 844149 30 100.0 34 .............................. GTGATTTCGATCTCCGAGTCGAGGGGGTCCTCGA 844213 30 100.0 34 .............................. AGCGAGCGCTACAACGTCAGCAAGACCTACGCGA 844277 30 100.0 34 .............................. TGGCCGGGCTGTTCGGGCGTGAATTGACCGACGA 844341 30 100.0 38 .............................. CCACGTGCGTCCGTGGTCATGTCCTTTCTTGGGCTATG 844409 30 100.0 35 .............................. ATCAATCAGGCGAAGCGAATTGCACCGAAAGGTGT 844474 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 56 30 99.9 36 GTTCCAGACGGACCCTTGAGGGGTTGAAGC # Left flank : CGAGGAAACGATCGAACATCCGAACCTGAACCGGAAAGTGAGCTATCAGTATCTGCTTCGACTGGAGGCCTACAAACTCAAAAAGCATCTCTTGACCGGTGAAGCATACGAGCCGTTCGAACGGTGGTGGTGAGATGGTTTACGTTGTGGTCGTTTACGACGTTCAGGCCCATCGCACACAGAAATTTTTGAAATTCTTGCGGCAGTATCTCGTTCACGTTCAGAATTCCGTTTTCGAAGGAGAGGTAACTGAAGGGGACATAGAAGAAATCAAGCATCGACTCGAATCGATGCTTGAAGATGAGGAGTCGGTAATACTCTATCGGATGGCCTCAGAGAAATACGTTACTCGGACGGTGTACGGTACCGATCCAGCTGCGGATGACCAATTCTTGTAATTTGTTCATCGACCCCCGGGGTTTTGGCGGCTACTGCGGGTCGACGAAATAACTAAATGCTAACCGCGTATATTACGCGCTGTATGGCCGAAATCGGCCATG # Right flank : CGTCAAATGACGGACTTCAGTGCATCCAATCCTCGGTTTCAGATTTAGCTTGAAGATGTAAAGAATGACGCCGTGCGAAGCGATACACGATCCTCGTCATTCTATCCCAGATATGCTCCCAAACCCAACACCCCAGATCAGTACCTGGAGAGATCGGTATCCGCCGTGTGCGGACGTGGTCGATCGGGCGGTTGGGGATTTGGCGGATCGAGCCCCGAGGCGTCTTCGATTTCGCGCCACACGATTCCCGATTGCCGGATCGTGAAGAGCACCTCCTCGTCGTCTTTCTTCCGCATGATTCCGGCCAGCGACCAGCTGGGATTGTCTACCTCGATCGGGGATACATCCGACTCTGTGGTCGCATGGAGGTCGGGATCGAAATCCGGATTTGGCCGCACCACCTCCGGGTCGGGGTCGTCGTGTGCGCGTTCGCGCTCACGCGTGATCATCTCGTTCGCGCCGTTCGAGAAGCGCACAACTTGCGTGCCGGTCGCCCAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACGGACCCTTGAGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //