Array 1 1234610-1235042 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP039710.1 Thermoactinomyces vulgaris strain 2H chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	==============================	=======================================	==================
   1234610	    30	  96.7	    37	......A.......................	TGTACCCAGATTTCGTGGCTTCCCTTGCCCTGACGCT  	
   1234677	    30	 100.0	    38	..............................	AATGACTCCGATTCGATCCGCCCGGTCGCATTGTCCAG 	
   1234745	    30	  96.7	    37	.....C........................	CAAAAGGTTCTCCATCATATTCCGAAACCGCCATTTG  	
   1234812	    30	 100.0	    39	..............................	TGACAAACTCAAAAAAGGCAACCATCACGCTTTTGCAGC	
   1234881	    29	  93.3	    37	.........A.............-......	ATCTCTCTAAAGCCTCCAAAATATTCTTTCGCTTTCT  	
   1234947	    30	  96.7	    36	.......................C......	CCCATCGCTAAGTTTAGAGGAGCTATACTAAACGGC   	
   1235013	    30	  80.0	     0	.........T..T....G...C......GA	|                                      	
==========	======	======	======	==============================	=======================================	==================
         7	    30	  94.8	    38	GTTTATGAACTACCTATAAGGTATTGAAAC	                                       	       

# Left flank :   TCTAATGATGCTTATGCAAATATCATGTTTGATGAGAAAAAACTTACTTTTCTAGGAGCTAAAACAACCTGTAAGGATAGATGGAGACAAATTCTTAATGAAGCTGATAGAATTCCAGTGAAACATTTACTAACTTTGCAACAAGGTATTAGTAAAAATCAGTTAGAGGAAATGAAGGCGGAGAAGGTTCAATTAGTAGTACCCAAATATTTGCATGGCAATTATCCTATCGAATATAGAAGTTATTTAATTGATTTTAAAACATTTATTGAACAGATGAGGGAGAAATACGAAGTCTAATATGTAGATATTGTCTACTATCTATTACTTAAACTTAGCTAATTATCTTCCTAAATAAGTCGTCGACCTCCAGTAGTGCAAAAATCCTTGGGGATCGACGACAATAATTTTTTAGTTTTATCAAGGGTTTGGAGATTTTCTTTCATTTTGGTATAAAAAAGGGTAAAATGAGAAACGTAGAGTTTTTGCGGAGTTTAGGG
# Right flank :  AACCATCAAATAAATGAAAGCAGCCCATTAGGTTTTTGGGCTGCTTTTTAATATGTTCAAGTATCGATTCAAAGTGTCCATATTCTCGCTAGTCGGTTTCACTTAAAGCCAGAAGTATTTTACTTAATCAAATAAGTCGCTTCATCGAGGAGGGAATGAGAATTGATTTTGGAAAAAAGTATAGGTAAGAGTCGGACTTGCAGCAAAAATGATGTTCGGCTTTTTAAACGTCCGTTGTTCTTTGTGTTGTTTCATAATGCTTAGTGAGATCAGCTTGTCGCACCAGGGTGTTCTTTTCCTGGATGAATTGCCGGAGTTTTCCAAAACGGTGCTGGAAGTGCTCAGGCAGCCCTTGGAAGACGGGACCGTCACCTTGGGAAGGGCAAGAGCGGTTTACACTTATCCGGCGGAATTTATGCTGGTCGCTTCCATGAACCCGTGTCCATGCGGTTTTTTTGGTTATGAAGAGGATCGCAGTTGCACCTGCACCCCGCACCAAG

# Questionable array : NO	 Score: 5.56
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTATGAACTACCTATAAGGTATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-3.30,-3.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
//