Array 1 47083-49732 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023913.1 Klebsiella pneumoniae strain FDAARGOS_439 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47083 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 47144 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 47205 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 47266 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 47328 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 47389 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 47450 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 47511 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 47572 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 47633 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 47694 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 47755 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 47816 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 47877 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 47938 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 47999 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 48060 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 48121 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 48182 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 48243 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 48304 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 48365 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 48426 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 48487 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 48548 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 48609 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 48670 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 48731 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 48792 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 48853 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 48914 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 48975 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 49036 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 49097 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 49158 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 49219 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 49280 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 49341 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 49402 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 49463 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 49524 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 49585 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 49646 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 49704 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //