Array 1 17-4010 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGNG01000016.1 Glaciecola sp. KUL10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17 29 100.0 31 ............................. GACGGCTCAGTGACTATTGATAATGGTAACG 77 29 96.6 31 ............................T GAATAACACCATGCGCTCTACGATTATCAAG 137 29 100.0 31 ............................. ATTCGCGCTTGCAGTATGGTGATAGTCACAC 197 29 100.0 31 ............................. CCTGTTGTTACTACAGGCTCAGTGTACGAAA 257 29 96.6 31 ............................T GAATCGGCTTGCCGTTAACTAGTACTCTGAT 317 29 96.6 31 ............................T TGCAAGGATTGAAAAGAGTCTTGATGAATTA 377 29 96.6 31 ............................T AAAACGCTTTGCTCTGATTCTAGTGAGTGAG 437 29 100.0 31 ............................. GTGTAGCGCTCATCGTTTTTATTCCGATGTT 497 29 96.6 31 ............................T ATCAGGAATAAAAGAGACAATAAAAAGCACC 557 29 100.0 31 ............................. CCTTTAGAAAGTCAGGCGCTACGAGGGGTTA 617 29 96.6 31 ............................T GTGAACACTTCCCCTAGGTCGTGTTCTAGAG 677 29 96.6 31 ............................T AATCTCTCTGCTATAATTACCTGCACCTCGT 737 29 100.0 31 ............................. CGTCACCGGTTACTTTCATCGAACACGAACC 797 29 96.6 31 ............................G ATTAAGGGTATTGACTACTTCGATGGTCAAA 857 29 96.6 31 ............................T TTACGCCACCTAATGAGCGTGTGGCTTTTTG 917 29 96.6 31 ............................C GCCATGCCATTAGGGAAATTACGCGCATGAG 977 29 100.0 31 ............................. TTACCACCACTAGCTAGTTTTAGCGGTCATA 1037 29 100.0 31 ............................. AATAGAGGTGTAAAAAATGGGGTCGCGTTCG 1097 29 96.6 31 ............................C TTGCGCGATTGCGGTAGTAACGAGATTTACT 1157 29 100.0 31 ............................. TCAGGGCGCAATACACCACTAGTGACAGCGC 1217 29 96.6 31 ............................T TTGCGGTCTTTAATGTCGTCATAAGCCACCT 1277 29 100.0 31 ............................. ACTCAAAGAATTGATTGACGCACAACAAACT 1337 29 96.6 31 ............................T AAGAAGTGTTACCCACCAAGAAAACAATATG 1397 29 100.0 31 ............................. AAATAGAGAGGAACGCACAAAATAAAAACTA 1457 29 96.6 31 ............................G CTGAAATCCCTAACTCTTCAGCCGCGCTTTT 1517 29 96.6 31 ............................C GATGAAGATGAAACGGAAGTCATTTTAGAGT 1577 29 100.0 31 ............................. ATACAAGCGCAGTGAGATAGGTAGAGCCATG 1637 29 96.6 31 ............................T TCATAGTTTCAAGCAGGGTTGTAGTTATCAA 1697 29 100.0 31 ............................. AACAAAAAACATGCAAAGTCTGCAAGTCTAA 1757 29 96.6 31 ............................G AGTTTTCATGCCACTGCTCCCAATTCATTAT 1817 29 96.6 31 ............................T GATATTGATATGGAGCACATACGCGAACACT 1877 29 96.6 31 ............................T TTTTAGATTTGTACATATCAAATAAATACAT 1937 29 96.6 31 ............................G GTAATGCGCTTGCTAATAATGCACTGGTAGA 1997 29 96.6 32 ............................C AATCAATCCATTAACGCTTATCACGTATATAT 2058 29 96.6 31 ............................T AGCTTAGGTGCTAAATATTCGTCAATAATTC 2118 29 100.0 31 ............................. CATTGGCATACACTGATATTCGTAAACAAAA 2178 29 96.6 33 ............................C CGCCACAGATGCCTATGGAACTATGTCCGAGTG 2240 29 96.6 31 ............................T GCACCATTAGCCCTTAATGTTACATCTTCTG 2300 29 96.6 31 ............................T CTTGGTGGGGCGGCTGATTGCATACAGGTCA 2360 29 100.0 31 ............................. ACAAAGAAGATTCGACCCAGTAAAGGGTGCG 2420 29 96.6 31 ............................C TTTAGAGCGGAAAATACACCAGTGTAAAATC 2480 29 96.6 31 ............................G TTTGATGAACTGCTAACACCTATCATTTCAA 2540 29 96.6 31 ............................C AATTACGCCTATCAATACAATAGCTAGCCAA 2600 29 96.6 31 ............................T GTGGTGAAATCTGAACCACTGCCCCCGCAAA 2660 29 96.6 32 ............................C AGTAACGCAGCTGCTTGCGCTTCATTTATGAT 2721 29 96.6 31 ............................G CTAGAGACAATGGTATAAAAACCATTTTCAA 2781 29 96.6 31 ............................G TGGTGGTATCAATTCGGCATGCTAGGCATTT 2841 29 100.0 31 ............................. ATATAGGCGCTATCGGACTCGGGTTCGTTAG 2901 29 100.0 31 ............................. AAAGTATTACATTTGCGTACTTGATGCGTTT 2961 29 100.0 31 ............................. GTCTAATATCATGCAATAACGGCATCTTTGC 3021 29 96.6 31 ............................G CTACCGTTAGCTGTGCTTGTTATTTTCATAT 3081 29 96.6 31 ............................T AATCACTCTCACATGAGCGGTTAATGCGAGG 3141 29 100.0 31 ............................. AAGATATGCGCAATAATGGAAGTATGAAATC 3201 29 96.6 31 ............................G TCACTGCCTAGCGCATCATCTGGCGCGCCGT 3261 29 100.0 31 ............................. TAATTGAATGTTTGCGGTTATCCATGACCAT 3321 29 96.6 32 ............................C TATTAGCACAGGCGGCAGTGGTAGCACTACAA 3382 29 96.6 31 ............................G ATATATTCAGACAATACAATGTCATTTGATG 3442 29 100.0 31 ............................. ATCAATCGATTCATCAAACGAATCACCAAAT 3502 29 100.0 31 ............................. GGCAAAACGCCTTTAAAAAATTTCGCCCTTT 3562 29 100.0 31 ............................. AGTCAAGAGCCACATGTTCATCGTTTAATTT 3622 29 100.0 31 ............................. TTAACAACACTTAGCGCACAAGTAGACGAAA 3682 29 96.6 31 ............................T TTCAAAGTCGCAAAAACAGGAGAGTGGGTAG 3742 29 100.0 31 ............................. CGAAAGCGAGACCATGCGTAATCACTCGGAT 3802 29 96.6 31 ............................T TTATGGATAACAAGACAGATGTAGCAGAATT 3862 29 96.6 31 ............................G CCACAGAATTTAAAGCTGGCTTGGTTTAAAA 3922 29 96.6 31 ............................C TTGTGGGTAAGTGCAAGCAACAACCGTCGGC 3982 29 93.1 0 ......................C.....T | ========== ====== ====== ====== ============================= ================================= ================== 67 29 97.8 31 GTTCACCGCCGCATAGGCGGCTTAGAAAA # Left flank : CTCAAATCATGCACTTG # Right flank : TCCTACGCCTAATGAATTTGATCATTTTTATGGTTCACCGAAGTGCAAACGGTTTTGAACGACTTTTACATTGTTTGTCTTGCTTTTGCAGCAGTCTGGCTGCAACCACATTTGCCAATGCGTTTAGCGATTCTTTAATAGCACAATTAAAGTGGGTTCAATGAGCGCAAGACTATCAAAGATGTAGGCAAGTAAGCAGTGAACTATAATGTTAGATTTTGAAACGAACACATGATGAACAAGTGTTAGAATTAAGGAGTAGGTAAACTGCCAGTAGTTAGTTACACTTTTGCAATATAAATGTATTTTGATATTTTGTGCCGCTAATTAAGCCTTAAACGCAAAGGTGATTTAGTGTGTTGTGCCACCCAGTAAATCTAAATAAGCTTGCGAGATCTGCTCAGAATTGATTTCATTAAGAATGTCTTTGTCTGCTTGCGTCAATTTATAGGGTAATGCCTCATTAATTTTGTTGCCCAGTTCTTCAGGGTTTCCAAGTT # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCATAGGCGGCTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 321164-321492 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGNG01000006.1 Glaciecola sp. KUL10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 321164 29 96.6 31 ............................C AACGACTTCAAATGTCACACCTTGCCGATTC 321224 29 96.6 31 ............................T TAATAGTGCCTTTGTTCATTGTTTGAATACC 321284 29 96.6 31 ............................T TAGCAAGCGCTTCACGAGCCTTAAAACGATT 321344 29 100.0 31 ............................. AAGTTATTAGCTTGGTATCTAATGTAAGATA 321404 29 100.0 31 ............................. GCCACCCCCACAGGCGGTACATTTGACGGGG 321464 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.7 31 GTTCACCGCCGCATAGGCGGCTTAGAAAA # Left flank : TTAAGTCTGTTCAAGTTGTTCCAGAAGTTTCAGAATACGTTTGTTTTAGTAGAAAGCATGTAAAAACCGCACATAGAATTGAACAAGAGATGCATCAAAAAGCAAGACTCTGGGCTTCGAAATCTGGAATTGGTATTGACGAAGCTTTAGAGCATCTTGAGAAGAGCAAGCCAACTGCGTCGTCAAGATTGCCGTTTGTTTATATGTACAGTCAAGAAACTAAAAAGCGGGATAATACCTCAAACGGTAAGTTCCCAATTTTTATTGAACAAATCACCAAGATAACGAAATCAAACGGTGTTTTTGATTGTTACGGTTTAAGTGCAAAACGCAATCCAAAGGGAACTTACGCAACGGTACCCATGTTTTAACCCTATACTTGTGTTCTTTAAAAATTAGTAAATATTTCAATAAGCTACAAAACTTGTGAAAAATTAGGTTATTTCGATAAAAATGACCTAAGTTCAAGTTGTAGCTTATTTTATTTTTGTTATTGTATT # Right flank : TCTGGACGCAATACGCC # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCATAGGCGGCTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //