Array 1 152849-148860 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKOV01000004.1 Klebsiella pneumoniae strain EuSCAPE_IL049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 152848 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 152789 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 152728 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 152667 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 152606 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 152545 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 152484 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 152423 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 152362 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 152301 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 152240 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 152179 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 152118 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 152057 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 151996 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 151935 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 151874 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 151813 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 151752 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 151691 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 151630 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 151569 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 151508 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 151447 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 151386 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 151325 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 151264 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 151203 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 151142 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 151081 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 151020 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 150959 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 150898 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 150837 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 150776 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 150715 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 150654 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 150593 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 150532 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 150471 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 150410 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 150349 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 150288 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 150227 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 150166 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 150105 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 150044 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 149983 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 149922 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 149861 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 149800 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 149739 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 149678 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 149617 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 149556 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 149495 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 149434 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 149373 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 149312 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 149251 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 149190 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 149129 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 149068 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 149007 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 148946 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 148888 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //