Array 1 26443-27140 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIXJ01000048.1 Klebsiella pneumoniae strain B-8658 NODE_48_length_28542_cov_32.370931, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26443 29 93.1 32 ............TG............... TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 26504 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 26565 29 100.0 32 ............................. TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 26626 29 100.0 32 ............................. CAGGTTATACTGGCAAAACGTCGATGGCTCTC 26687 28 93.1 32 .....-.......T............... TAAATCAGCAAATATTGTTGTCTACCGTGTCG 26747 29 93.1 32 ............TC............... AGCAAATCGAAAATCCGGCTGTTTGAAAAATG 26808 29 100.0 32 ............................. TGAGGCTGCTGACGGAGAAATGGGACCTGTTC C [26813] 26870 29 96.6 32 ..............C.............. CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 26931 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 26991 29 93.1 32 ...C......................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 27052 29 96.6 32 .............T............... GGCATGAGCGAGAACCACTGCGAGAGTGTGGT 27113 28 89.7 0 ..........A...........-.....A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 95.1 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAACTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 110784-108134 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIXJ01000008.1 Klebsiella pneumoniae strain B-8658 NODE_8_length_190426_cov_23.783357, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 110783 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 110722 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 110661 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 110600 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 110538 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 110477 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 110416 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 110355 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 110294 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 110233 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 110172 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 110111 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 110050 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 109989 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 109928 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 109867 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 109806 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 109745 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 109684 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 109623 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 109562 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 109501 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 109440 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 109379 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 109318 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 109257 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 109196 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 109135 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 109074 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 109013 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 108952 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 108891 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 108830 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 108769 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 108708 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 108647 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 108586 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 108525 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 108464 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 108403 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 108342 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 108281 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 108220 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 108162 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //