Array 1 349566-350309 **** Predicted by CRISPRDetect 2.4 *** >NC_019940.1 Thioflavicoccus mobilis 8321, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 349566 36 100.0 34 .................................... GGGCATCGAACGTCCCCTTCTCGCACCGCAGGGC 349636 36 100.0 33 .................................... GCATACGCATGCTCGTTATCTGCAATGCGAATC 349705 36 100.0 32 .................................... CTCAACAAAATCCAGTATTCCTCAGAGCCTCT 349773 36 100.0 33 .................................... CTAATCTCCGCGATCCCATTCCGCCGGATAACC 349842 36 100.0 32 .................................... AATCCCGTTGATCCGATGAGCAAAGCAAAGGG 349910 36 100.0 34 .................................... TCATCAGGAAGAAAAGATAGAGTGCGCTTCCTCC 349980 36 100.0 32 .................................... CCGCCAAGAACTCCGATGAATATTACGTAAGG 350048 36 100.0 33 .................................... CTCGACCGAGAGTCGGGAACATCAAGCCGATTA 350117 36 100.0 51 .................................... AGATCAGCCCTCCGGAGATCAGCCCTCCAGAGATCAGCCCTCCAGAGAGCG 350204 36 94.4 34 .........T..G....................... GTCAGAGCGAATGCGTTTCGATCAGGGTCTGGAG 350274 36 94.4 0 T.................................G. | ========== ====== ====== ====== ==================================== =================================================== ================== 11 36 99.0 35 GGCCTGACGCTTACCTGATGAAGAAGGTATTGAGAC # Left flank : TCCTCGAGCGCGGTCTGCCCCACAGCGAGATCCTGATCGACGTCACCGGCGGGCAGAAGACCAACGCCATCGCCGCCACGGCCGTCGCCCTCGCCGAAGGACGCCGCATCCAATACGTCGCCTGCGATCGCGACACCTGCACGTGCCACCTGAACGTCTACGATGTCACCTACGACGGTTGACCCGGGCGATTTCGTCGATCGCCCGACGAACCGGAACAGACGCCGGGTCGCCGGCTGGCGGGACGACGGGATCATCCGCATAATTGGAACGGCGAAGCTGAAATCCCGGTGCCGTCGATGACTGCCTGAGCGACGCCCCGCACCAATGCCACGGAGGAGAACGATGGTGACGACCTGGCCGGGCCGAACGAGGCCGGACGACGTCCGCCTCAGCTCCAGGCACCCCGCGCGCAGCGCTAACTGCCCTCTATCTCTTTTGATATATCCAGAAAACTGTCCTAAGCTCTTGCTGTCGGGCCGCTTTTTTCGACTGCCAGA # Right flank : CTTCGTTGAAGACGGGTTGCCGGCGATCGGGGCGCCGGCCAGTCGGTCGCCCGCAAGCGGGCTCCTACGTTGGAGCACGGCCGGGGTGCCGTGCCTGGCGCCGACTCGGTGGCGAAGGGATTCGAAGAGGAGGCGATTTCGTTTAGCGAATGGCCAGCGGCTGGTGCTATGCGGTGATGCAAAGACGACCGGCCCTGGCAGGCTTGGGGAGTTGATCCCTCCGACCAGGCTGCTGCTCGACTGCCGCAGCAGGTCGTTCGGGGCCGAGCCGAGCGACGGGAAACGGCCGGCTCGCCCGCCCGGGTGCGCCCGTCGATCAGACGGCGCGGAAAGATGGCCCGGTCAGCGCCGCCGTACCCGCACCTGAACAAGCTTGCCGCGGATCGGGCGCGGCGCCGGCGCCGGCAACATGCCTCCACCGTCCATTTGGTGGAGCCTCACTCATGCGCCTTACGAGCTTCTTTCGCCTCGGCTGGACCGTTCAGCTCTTCGTTGGCGTG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTGACGCTTACCTGATGAAGAAGGTATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 355322-356264 **** Predicted by CRISPRDetect 2.4 *** >NC_019940.1 Thioflavicoccus mobilis 8321, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 355322 36 100.0 34 .................................... ACCGGACTCGTAGCCATTACCGAACCCGGTATAG 355392 36 100.0 34 .................................... ACCCCTAGCATCAGCAACACTGATCTGCGCCTGC 355462 36 100.0 33 .................................... AACATGATCGCAACAATAAGCAATAACAATCTT 355531 36 100.0 35 .................................... CTTAAGAAGCGGGCCCCTTTCTGAGTCCAGGCGTT 355602 36 100.0 34 .................................... GTCACCGATCGCGCTTTTGCCACTCATGGTCGTC 355672 36 100.0 32 .................................... CGAGAGAGAACAGTCGACTCCCCCCGATGATC 355740 36 100.0 35 .................................... GGCCTGAAAAACGGCCCATAAACCCTATACAGAAC 355811 36 100.0 35 .................................... TGTGCGAACTCTCATGGGAATCATCCTTGATTTAT 355882 36 100.0 34 .................................... GATGTAGGCCAGCGGCGCTGACCATTGTCCAATA 355952 36 100.0 34 .................................... CGATTTACATATAGGGATCTGTCGAGATGGATCA 356022 36 100.0 32 .................................... GTCATCCAACTAGGCATGTGAGCCTCGATACG 356090 36 100.0 33 .................................... GCAGATATTCATCCCCCCCGATAATGATTCCGA 356159 36 100.0 34 .................................... GAATCGTGAGGATTCCTACCGACCTGCCACTAGC 356229 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 14 36 100.0 34 GGCCTAGCACTTACCTGATGAAGAAGGTATTGAGAC # Left flank : GCCCGCTGCTGCGGGTCCTCGACGGGTTCGTCGCCGATGCCAAGGCGATGAAGCTGATCGAACGCTGGCTCGGTCAGGGTGCCCACGTGCGCAGCCTGCTCGCCACGCCACGCGGCATCGCCCAGGGCGCGATCCTCTCGCCGCTGTTCTGCAACCTCTACCTGCACGGGTTCGACCGCAGCCTCGACAGCGCCCATATCCCATTCGTAAGATTCGCCGACGATTTCCTGCTGTTCGCGCCGACGCGCAGCGATGCCGGCCGCGCGATGGAGCATGCCGCCCGCCGGCTCGAACGGCTGGACCTGCGCCTGCACCCGGACAAGACCCGGGTCGTACGCAGCGGGCGCGAGGTGATCTTCCTGGGCGAGACCCTGCCCGGCCCGACCCGCTGACCCCGAGGAGAACGCCATGTCCAGGGCTAACTACCCCCTATCCCTTTTGATATATCCAGCCGATCGTCCTAAGCTGTTGACGCCAGGCCGGTTCCCGAACGTGCCAGA # Right flank : CCGCTCCTCGAAGGAGGGGTTATCTTTAGTTCCAGGCCTAGCACCTAGCTGATGAAGAGGCGAGCGTAGGGTCCGCTGTGCGGACCATCTCCTTTGCCAGTTCGAAGGATCGGCGTGGCGGAGCTTTTGGGGCTGGTCCTGCGATTCGGTCCGCACAGCGGACCCTACGTTGCCGAGTCCGCACAGCGGACCCTGCGGTGATGGCTCGAAGGGTGCGGCTGGGGTCTCGGGCGTGGTCGAGCACTTACCTGATGAAGAAGGTATTGAGACCCGTCGATGAGACGAGCTTTGGCAACTTTGGCGGGCCTAGCACCTAGCTGATGAAGAGGCGAGCGTAGGGTCCGCTGTGCGGACCATCTCCTTCGCCAGTTCGAAGGATCGGCGTGGCGGAGCGCTTGGGGCTGGTCCTGCGATTCGGTCCGCACAGCGGACCCTACGTTGCCGAGTCCGCACAGCGGACCCTACGGGGATGGTGCGAAGAGCACGGCTGGGGTCTCGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTAGCACTTACCTGATGAAGAAGGTATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 1387046-1382797 **** Predicted by CRISPRDetect 2.4 *** >NC_019940.1 Thioflavicoccus mobilis 8321, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1387045 36 100.0 36 .................................... TACAGCGGCATCGCCAACGCCCGCGCGGTCGTGACC 1386973 36 100.0 36 .................................... ATAAGCGCGTTTGCGACATCATTATGAGACGTACAT 1386901 36 100.0 37 .................................... TCTTCGAGGATCGGCATTTGGCTTATCTCACGCTGCG 1386828 36 100.0 37 .................................... AAACCTCATCCATTTCCCTAATTGCTTCGGAAACAGA 1386755 36 100.0 36 .................................... CCACGACTATTGGAAGAGGAACCACCTCAGCACCTT 1386683 36 100.0 39 .................................... GCCTCCGGTACGGACAGCCCCTCATTAGCGAAAGGCAGG 1386608 36 100.0 38 .................................... GTGACCTTGCTCGTGGGACCGCTGGCCGTCCGACTGGA 1386534 36 100.0 36 .................................... CGGGGCGACGAGGCGCAGGCGCAGATCATGTGGTGG 1386462 36 100.0 35 .................................... TAGATGAAACGAATATTGAAAAAATAGACAATTTA 1386391 36 100.0 38 .................................... AATACGAGGAGGTGCAAGTGGCAGCCGGATACGAGGGA 1386317 36 100.0 36 .................................... CTAAGCTCGCGCTGGCGCTTGAGGATGGCGAACAAC 1386245 36 100.0 35 .................................... CAGGGCAGCTTTACCGGGGATCTGATCACTCCGAC 1386174 36 100.0 37 .................................... TCCGGCTCACTCCAGGTGAGCCGGGCCGTGTGGACGC 1386101 36 100.0 36 .................................... AGCGCGACGGCTCTCCGCGCGGGACGATCGCTCGTT 1386029 36 100.0 36 .................................... TGGCTGGATTCTGGCTGGATTCCATGGCCACGTCCG 1385957 36 100.0 37 .................................... GTACCGGTTCGGCGGTAATTGGGTGTACCCCGATGAA 1385884 36 100.0 36 .................................... GTACTTGGCAATGGCGACGCCATCACCAATCCAACC 1385812 36 100.0 37 .................................... CTTACGATTCGACCAAATTAATAGAGCCCACGGTAAG 1385739 36 100.0 35 .................................... AACCGCCGCTGGCTCGGATTGCGCGCTTGAATCGT 1385668 36 100.0 38 .................................... CTTCGGCGGTCATGCCTCGGCGCAAGATCGGTCAGGCG 1385594 36 100.0 36 .................................... TTGCGGAGCTTATCCTTATCGCATTGTGCCTTCACT 1385522 36 100.0 36 .................................... GGAGTAATAAAAACGGTTGGGTATTTGCCCGACAAG 1385450 36 100.0 38 .................................... GCCCAGATCCGCGACAAGCAGCTCAATCTGCACATGTT 1385376 36 100.0 36 .................................... AGCGGCGAGAAATCGATAGCCAAGGTTCCTCGCTTT 1385304 36 100.0 37 .................................... AAAATGTACCAAATCAATTCAAGCCGCTATTCGCGCA 1385231 36 100.0 39 .................................... CAGAACGAAACCAGCCCCTGGGGCGAGCCGTGGGCGCCG 1385156 36 100.0 38 .................................... ATTCGAATCTCGTGGAAATCAACAAACTCCTGCCACAC 1385082 36 100.0 36 .................................... TTCTCCAGCCCGCGGCTGGAGCACCAAGGGGCGGAA 1385010 36 100.0 35 .................................... GGCAGGGCCTCCTTGAACAGGCGATTGGCCGCGGA 1384939 36 100.0 36 .................................... CTTACAGCTTCGACCGCACCGTGGTCGAGTTCAGCG 1384867 36 100.0 36 .................................... GTATTGAGCGCTGCCCGGCTGAGCCTTGTCGGCGAC 1384795 36 100.0 40 .................................... TCGTAAGAGACCTTCATGCCGGTGCCGACGGCGTTGGCAT 1384719 36 100.0 36 .................................... AATCCCAACCACCAGAGTTGTCGCTCCATCCTACGC 1384647 36 100.0 35 .................................... GACTGCTCGGCATTGAGCTCCGCCGTCTTCTCGGC 1384576 36 100.0 37 .................................... CCGTGTAATCCGATTTGTGCCCGTGCTTCTCCCCCGC 1384503 36 100.0 37 .................................... ACGGCGCGCCAGGCGGCGCGGATGGTGGCGTAGCGGG 1384430 36 100.0 36 .................................... GATGCCGCGCACACCCAGTGGGACAACGGCGGCGAC 1384358 36 100.0 37 .................................... GCCTGAGCCGTTGCCGGAAGCGTTTTTATCCCTGATT 1384285 36 100.0 37 .................................... CCTTGCGGACCTCAGCGAGCCGCTCACGGACGCTCTG 1384212 36 100.0 36 .................................... GTCCGGGGCCACTCTGTGGTTTGGTCGCGGCCCAGC 1384140 36 100.0 38 .................................... ATGGAGCCAGAACATAATCCAGTGCTGCCTCTCTACAC 1384066 36 100.0 36 .................................... TTCGGCACGGCGCCCGTGTGGATTGCCGGCAGCGCT 1383994 36 100.0 36 .................................... TGGTCCTACGCGACCGGTGCCATCCACGCCGACGAC 1383922 36 100.0 36 .................................... GGCGGGCCGTCGTGGCGCCGGCGGTTGCGGCAACGG 1383850 36 100.0 36 .................................... GTCTGTTGCCACCTCTTCGTACTCGCCATTTACTGT 1383778 36 100.0 36 .................................... AGATGCTCGATAGGCGCGACGCGGGGCAGGGGCAGG 1383706 36 100.0 37 .................................... TCCGCGAGAAACTCCATCGTCCGTTGCGGTTGTTGTT 1383633 36 100.0 36 .................................... ATCCGGTGCCATGTTATGGGCGCCTATCATTTCGGT 1383561 36 100.0 38 .................................... GCTGGCGGGGTTGTGCGGTGATTAGCCGGCGCCAGTGC 1383487 36 100.0 35 .................................... AACATACGTCAGGCCGCGCAACCGACCGTCTGACA 1383416 36 100.0 36 .................................... CTCGTCGTCCCCATCTTCACACCGACCGTCGCGACC 1383344 36 100.0 37 .................................... GGTAGCGCCAGCGTGGTGCCGCCGTGCTCGCGGGTGA 1383271 36 100.0 37 .................................... TCGCCGAGGGCTACGGTCCACGTCTCCGGGAAGAACG 1383198 36 100.0 36 .................................... GATCCGGCCGACGTGGCGAGGGTGCAGTCGGTGTTG 1383126 36 100.0 38 .................................... TGTGGAGGAGCTACAAGGGGCAAGGCACGATCGACTAC 1383052 36 100.0 39 .................................... ACGGTCGCCAGAAGGGCGCGCAGTGCTTGCGGAAGACCG 1382977 36 100.0 37 .................................... CGGCCACCCTGCATTGGCCGGAGGAGTTCGCGTGGAC 1382904 36 91.7 36 ..........A..........TA............. GGGCGAGACATTGTCCGCACAGGTCGGAGACCAAGG 1382832 36 80.6 0 ..........................CT...ACGTG | ========== ====== ====== ====== ==================================== ======================================== ================== 59 36 99.5 37 GAATTCCGCGGCGAATAGCCGCGGCCTCATTGAAGC # Left flank : CGACTGGCTCCAGCTCTCGGTCTTCCAATGCCGCCTGACGAAGACGCAACACGCCGAACTGATCGCACTTCTCGACGGCATCATCCACCACACCGAAGACCACATCATCCTCCTCGATCTCGGCCTGGCCGAGGCCGTCGTACCACGTGTCGTCAGCCTCGGCAAACGCGACTACTCCCCGATCGAACACGAGCCTATCATCGTCTGATCACGACTCTGTCGGGTACCAATTCCGCCCCTACCAGCCGATAATCGACCCGACGGACCACGACATCCCGGTCATCTCATCGTCGACAACATCCGCCGACCCACCGCGAGCGCTCCTTTGCCGCCAGAACTCCCGGGCAGCGCTCGATAAAAATAGATCTTTAAAAATCTAGAAATTACAATAAAATCTGAACGTGACACTTGATAAATTGACATCTCTCGTGTTCGTCTCCACCTACAGCCCTCGAAAAAACGCCCGCAGTCCACGCCACTTCTGGGCTGACAGGCGGGCC # Right flank : AGCAGGATCTTATGTGGCGAAATCACATGCGGGAGCAGTCGTCAATGGTCGGCGCCCGCATGGATGGGGATCGAGCGACGGGGTCTGCTTTTCGGCGAAAAGATACTTGTGGACGCTCATCGCCGAGTCTTGAGTTATACGTATGAGTTTAAAGAGCTAACTTTGTCTGGTCCTCGCCGCGATTTCAGAACTGCCGTACCTTGATGTTGAGCGTCTGGATACGGTAGGCGATTTGGCGGGGCGTCATGTTGAGCAGGCGGGCGGCCTTGGCCTGGACCCAACCGGCCTCTTCAAGCGCGGCGATGACGCGTTCGCGTTCGTCGAGATTCGGATCGTCGATGTCCGGCTTGGGGGCCGATTCCGCAGCCGGAGCGAGGGCCGTCGGCGTATCCGTGTCCAGGCCGTCGCCGAAGCCGCTGAGGTGGATTGCGTCGCGGTCGATGACGCCGGTCTCGCTCATGACGGCGGCGCGCTCCAGACAGTTCTCCAGTTCGCGCACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTCCGCGGCGAATAGCCGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.00,-15.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //