Array 1 80178-79133 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN651347.1 Halomonas salina strain B6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 80177 28 100.0 32 ............................ AGGGCGGAGGCATCGCGCAGGCGGCGCAGCTC 80117 28 100.0 32 ............................ TGATAGTAGCCCTGTTGCGTGTTGGCCAGGGC 80057 28 100.0 32 ............................ TCAGATCTCGCCGAGGTTCAGTGTAGCCTCGC 79997 28 100.0 32 ............................ AGGTAGCAGTAGATGATGTCGGCGGGCGAGTT 79937 28 100.0 32 ............................ ACGCCGACACCCACGGCCTGCAGCACGCGCTG 79877 28 100.0 32 ............................ CGCTGGACGCTCTACCCCGCCTGGAAGATGGC 79817 28 100.0 32 ............................ TCGCACATGGCGAGCGTGCGCGGGCAGGCAAT 79757 28 100.0 32 ............................ AGATCAGGTAGAGCGGCTCCTCAGTGGGGAAC 79697 28 100.0 32 ............................ AGAAGACCAGCGACTGCCTGACCGCGGCCCTC 79637 28 100.0 32 ............................ CAAGCGCCGCGCAGAACTGAATGAGGCGGCGT 79577 28 100.0 32 ............................ AGTTCATCTCGGCGATCCTGGCATCGGCCGGC 79517 28 100.0 32 ............................ TGGGGCGACTGGAAGACCGCCCGCGAGAAGAT 79457 28 100.0 32 ............................ GCGCTGACGCAACGCGGGACCGAGATATCAAA 79397 28 100.0 32 ............................ ACGTGTGCCACCTGCGGAATGGCCTTGTCGTT 79337 28 100.0 32 ............................ AAAGGTATACGCCTGTTCCAAAAAGTCGCTAA 79277 28 96.4 32 ............C............... TTTCTGTGGCGCGAGAGCGAGGTCGCCTATGC 79217 28 85.7 30 ..G.........GA...........G.. GTGGATCACTACGCGCACCTGTACTACTAG 79159 27 78.6 0 ...........TC..A.AC....-.... | ========== ====== ====== ====== ============================ ================================ ================== 18 28 97.8 32 GTTCGCTGCCGCTCAGGCAGCTCAGAAA # Left flank : CTCGGCTTGAGCAGTTGATGGCGAGTTCGTGGCTCACCGGCATGCGTGACCACGTGATGCTGCAAGCCATTCAAGGCGTGCCTGATGAATCGCAGCATCGAGTTGTTCGGCGCCGACAGTTCAATACCGGAAGCCCCAGCCGAGCGAAGCGTTATGCTCAGCGGCACGGTATAGAAACCGAAGAGGCGCAGTGCCTGATGGCGACGCCTGCCGCACGGAAGATCGCCTTGCCATTCGTGCAAGTTAGCAGCCGCTCCAGTGGGCAGCGGTTTGCGCTATTCATCGAACATGGTCAACCGCAGTCGAAACCCGTGGCTGGTCGGTTCAATCATTACGGACTAAGCAGCGAAGCCACAGTGCCCTGGTTCTGACCCTTTTTCAGAGCTCCTCCTTAATACAATGAAAATCAGCTAGTTATCAGCGCCTCTCTCAAAAGGGAGGTGTTGCTCTATCAAACCATTGCTCTTTAACAATCAGTTAGTTACTTTGAGATCGCTCTA # Right flank : ATACTAGCGCCGCAGCGGTCTGCTGTGCTGCGAGAGGGGCTAATGAGCGAGACGGGGCTGAGTTGCTTCAAGAGGGCCCTCGCTTTGCCGCGTGCTGTATTCTGACGCCGGCAGGATTCCGGGGGGTGTTGATATTGCGAAGGGTACACCCCACCCTTGGGAGTACAGCCAACAACCCTGGAGGTTGAGATGAGCGACCTGAAAGAACACAGCTGTGAAGCCTGCAGCCCGGACGCGTCCAAGGCGAGCGCGGAAGAAAAGCAGCAGTTGCACAAGGATGTTCCGGATTGGGAAATCCGGGTGGTTGACGGTGAAGAGCAGCTTCACCGGCTCTTCAAGCTCAAGAACTTCGCCAAGGCGCTGGAATTCACCAACAAGGTGGGGGATCTCGCCGAAGCCGAAGATCATCACCCGGTTATCGTGCTGGAATATGGCAAGGTTGCCGTGAGCTGGTGGAGCCATGAGATCGGCGGCCTGCACAAGAACGATTTCGTCCTTGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCTCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGCAGGCAGCTCAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //