Array 1 154309-155529 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZRL01000004.1 Kingella denitrificans isolate GC77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 154309 32 100.0 33 ................................ CACCATGCCTTGTTTATTGCCTTGAATAAACGC 154374 32 100.0 33 ................................ AGCACGGAATTTACAGCGGCGGCAAGATTCAAC 154439 32 100.0 34 ................................ AGAGAGCCGGAACAACAAGAGCCGGTGCAGACGA 154505 32 100.0 35 ................................ TTATTTTGCCTAAACATAACAGTATCATGGGCCAC 154572 32 100.0 35 ................................ GTCATTATCAAAAACGGAATAATGATACGGCGTAT 154639 32 100.0 34 ................................ CGCTCCAACCTATCCGAAAGCGCTTTAAACAAAC 154705 32 100.0 33 ................................ CGAATTTCGGTAGTTGGGTTAAAGAGATAATTA 154770 32 100.0 33 ................................ ACAAAAGCCAACGGCTACTTGATGATTGGCGAC 154835 32 100.0 34 ................................ ATCGAAAGTGGCGTGAATGTCCACCGTATTACCA 154901 32 100.0 34 ................................ TTGGCAAACATTCCGCCATAGGTTTAAAACCGAA 154967 32 100.0 34 ................................ GTTTTCCCATGTGTCGTCCAGCAATAATAGTGCC 155033 32 100.0 33 ................................ AGATTAAACACATCGCCGTTTTGCAGTAAGAAC 155098 32 100.0 35 ................................ GGGTGTCCACTCTTTGCCTAGGCGCAGGCAGATGC 155165 32 90.6 34 ...........CG..T................ AACCCGTTCAAAGCGGCGCAGCTGATGGTGCGCG 155231 32 93.8 36 ...........CG................... GAAAGCATGAGGATGAAACTGGACGGATTGAACCGC 155299 32 93.8 34 ...........CG................... CATCTGCTGCTCGTGGGTCAGGCCGGAGGGTAGG 155365 32 90.6 34 .....T.....CG................... ATAACAGCTGGTATGCCGCTTATGCAGATGTTTT 155431 32 100.0 35 ................................ TAGCAGGTTTTGCGCGTTTTTTGTCATAAAGCTAT 155498 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.4 34 CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC # Left flank : GCACATAGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGGGGAAGGACCGGCAAGGCTGCGGCGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAGTATTCGGTGTTTGAATGCGACATCGCACCTGACCAGTGGGTTGTTTTAAAAGACAAACTTTTGAAAACCTACAACCCTGAAACCGACAGCTTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCACAAAGTGGAACACCACGGCGCGAAACCGGCGGTGGATGTGTTTAAGGATACGTTGATTGTGTGAATCGCCAACCTGCGGTTCTCATGAAAATGCGGTAGGGTTGGCGAACTGGAATTATTCTTTAACAATCAGGATATTGCGAATTCAGGTGTAACGGAAAAGGCTGTGTTATACTCGCGTTCGCGCTTTTCTTGGGAGCTTAGCGAAATCAGGGCTGCGAAACCTGATGGAGCAAGGCTTTTGAGAGAGGCT # Right flank : CTGCCTGTCACTTGATTTTTTCGCTGTCCCGATGGTTTATTAAATCAGTTGCTCGCCCCAGTGCAGTTTTTGGCGCAGGGTTTTGTAGTATTGGTAATGCGTGGGGTGCAGCACGCGCAGGTGATGGTGGTAGCGGCGCAGGGTGATGATGTCTTTGCTCTGCATATCGACAAACGATTGGCCGTCGTAATGCAGGCGTGCGTCGCGGGATTTGGTGATGAGGATTTTGATTTCGAAATTGTCGGAAATGACGATGGGGCGGTTGGTCATGGATTGCGGGCAGATGGGGACGAGGGTGAAGGCGCGCAATGTGGTTTGCAGAATGGGGCCGCCGGCGGCCAGCGAATAGGCGGTGGAGCCGGTGGGCGTGGAGACGATGAGGCCGTCCGAGCGTTGGGTATAAACAAATTCGCCGTTCACAAACACTTCAAATTCAATCATTTGCCCCGTGCCGCCGCGCGACAGCACCACATCGTTCAAGGCCAGCGCCTGATGGATGG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 45-271 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZRL01000010.1 Kingella denitrificans isolate GC77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 45 32 100.0 32 ................................ CCAACATGCTTATTTCTGGGGTGCGGGGCGCG 109 32 100.0 34 ................................ GACAAAACCAACCTGTCCAAAACCGAACAGCAAA 175 32 100.0 33 ................................ CGCCTATCCTTATGTATCTGAAATTTTGAGCTA 240 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 4 32 100.0 36 CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC # Left flank : TCAGGGCTGCGAAACCTGATGGAGCAAGGCTTTTGAGAGAGGCTC # Right flank : CGCCTTGATTCGCGCCATTTTGAACAAATATGCGACCAGCAACCTTCGGGGCGTTGTATTGAAGCGACATGGAGGCGGACAAATTGGATAAGTAAACATGTGCTGAAATAGGGGAATTTAGTATGAAGGCGGCTAATGCGTAGCTACTTCCAGATAACTTAGTATTAGATTAAATAATTTAAATTCAATACCTTATATGGAAAACCTGCAATTTCTTGAATATCTCTATATCCGAGTTTTTGCATAATCGAAATTGATATATATATTATACGTTAAGGTGAGAACAGATAGGTATTAAAAGCCTTTTAGTCACACAAGTAACAGCCTCATAATAGGAATATAATTCAGATTAATAAACTGTGATTATCTCTAAAAATAATTTTGTAGATGTTTAATCCAGATAACTTCTCAATGTAAATGTGCAGGCTGCTTTTTCACGATTTAAAAAGCAGCCTGCACTCATTTGCCTTATTTCCCATGCAGCCTGCGGATTTCATTTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCAGCCGCCTTTAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //